Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--2029
(406 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_56628| Best HMM Match : Actin (HMM E-Value=0) 182 1e-46
SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.) 177 2e-45
SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.) 177 2e-45
SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.) 176 6e-45
SB_56| Best HMM Match : Actin (HMM E-Value=0) 176 6e-45
SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.) 175 1e-44
SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.) 79 2e-15
SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12) 60 9e-10
SB_54| Best HMM Match : Actin (HMM E-Value=0) 60 9e-10
SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022) 57 6e-09
SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 2e-04
SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011) 38 0.002
SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6) 38 0.004
SB_37540| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.27
SB_18097| Best HMM Match : NadA (HMM E-Value=2.2) 31 0.27
SB_5400| Best HMM Match : DUF1153 (HMM E-Value=7.8) 31 0.27
SB_21074| Best HMM Match : NadA (HMM E-Value=2) 31 0.36
SB_38372| Best HMM Match : RVT_1 (HMM E-Value=0) 31 0.36
SB_2458| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.36
SB_47621| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.47
SB_15522| Best HMM Match : DUF590 (HMM E-Value=5.8) 31 0.47
SB_4310| Best HMM Match : RVT_1 (HMM E-Value=5e-28) 31 0.47
SB_35780| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 0.62
SB_38460| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 0.82
SB_56449| Best HMM Match : RVT_1 (HMM E-Value=0.28) 29 1.4
SB_2746| Best HMM Match : RVT_1 (HMM E-Value=1.10002e-42) 29 1.4
SB_2102| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.4
SB_55880| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.4
SB_24270| Best HMM Match : DUF1604 (HMM E-Value=5.2) 29 1.4
SB_11764| Best HMM Match : DSHCT (HMM E-Value=1.9e-27) 29 1.4
SB_10927| Best HMM Match : RVT_1 (HMM E-Value=6.6e-39) 29 1.4
SB_5114| Best HMM Match : RVT_1 (HMM E-Value=1.10002e-42) 29 1.4
SB_28979| Best HMM Match : RVT_1 (HMM E-Value=1.6e-40) 29 1.9
SB_20462| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 2.5
SB_11603| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 2.5
SB_22432| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 4.4
SB_43973| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 4.4
SB_30175| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 4.4
SB_26826| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 4.4
SB_28400| Best HMM Match : PMSR (HMM E-Value=1.7e-24) 27 5.8
SB_222| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 5.8
SB_35006| Best HMM Match : PT (HMM E-Value=3.4) 27 7.7
SB_12742| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.7
>SB_56628| Best HMM Match : Actin (HMM E-Value=0)
Length = 376
Score = 182 bits (443), Expect = 1e-46
Identities = 82/85 (96%), Positives = 85/85 (100%)
Frame = +3
Query: 87 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 266
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 267 SKRGILTLKYPIEHGIVTNWDDMEE 341
SKRGILTLKYPIEHGIVTNWDDME+
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEK 85
Score = 45.6 bits (103), Expect = 2e-05
Identities = 16/19 (84%), Positives = 18/19 (94%)
Frame = +1
Query: 340 KIWHHSFYNELRVGPDEHP 396
KIWHH+FYNELRV P+EHP
Sbjct: 85 KIWHHTFYNELRVAPEEHP 103
>SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 376
Score = 177 bits (432), Expect = 2e-45
Identities = 81/85 (95%), Positives = 84/85 (98%)
Frame = +3
Query: 87 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 266
M D+E+AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MEDDEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 267 SKRGILTLKYPIEHGIVTNWDDMEE 341
SKRGILTLKYPIEHGIVTNWDDME+
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEK 85
Score = 45.6 bits (103), Expect = 2e-05
Identities = 16/19 (84%), Positives = 18/19 (94%)
Frame = +1
Query: 340 KIWHHSFYNELRVGPDEHP 396
KIWHH+FYNELRV P+EHP
Sbjct: 85 KIWHHTFYNELRVAPEEHP 103
>SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 349
Score = 177 bits (432), Expect = 2e-45
Identities = 79/85 (92%), Positives = 84/85 (98%)
Frame = +3
Query: 87 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 266
M D+++AALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MADDDIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 267 SKRGILTLKYPIEHGIVTNWDDMEE 341
SKRGILTLKYPIEHGIVTNWDDME+
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEK 85
Score = 45.6 bits (103), Expect = 2e-05
Identities = 16/19 (84%), Positives = 18/19 (94%)
Frame = +1
Query: 340 KIWHHSFYNELRVGPDEHP 396
KIWHH+FYNELRV P+EHP
Sbjct: 85 KIWHHTFYNELRVAPEEHP 103
>SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 338
Score = 176 bits (428), Expect = 6e-45
Identities = 79/83 (95%), Positives = 83/83 (100%)
Frame = +3
Query: 93 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 272
D++VAALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 2 DDDVAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
Query: 273 RGILTLKYPIEHGIVTNWDDMEE 341
RGILTLKYPIEHGIVTNWDDME+
Sbjct: 62 RGILTLKYPIEHGIVTNWDDMEK 84
>SB_56| Best HMM Match : Actin (HMM E-Value=0)
Length = 375
Score = 176 bits (428), Expect = 6e-45
Identities = 80/83 (96%), Positives = 83/83 (100%)
Frame = +3
Query: 93 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 272
++EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 2 EDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
Query: 273 RGILTLKYPIEHGIVTNWDDMEE 341
RGILTLKYPIEHGIVTNWDDME+
Sbjct: 62 RGILTLKYPIEHGIVTNWDDMEK 84
Score = 45.6 bits (103), Expect = 2e-05
Identities = 16/19 (84%), Positives = 18/19 (94%)
Frame = +1
Query: 340 KIWHHSFYNELRVGPDEHP 396
KIWHH+FYNELRV P+EHP
Sbjct: 84 KIWHHTFYNELRVAPEEHP 102
>SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 375
Score = 175 bits (425), Expect = 1e-44
Identities = 79/83 (95%), Positives = 83/83 (100%)
Frame = +3
Query: 93 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 272
+++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 2 EDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
Query: 273 RGILTLKYPIEHGIVTNWDDMEE 341
RGILTLKYPIEHGIVTNWDDME+
Sbjct: 62 RGILTLKYPIEHGIVTNWDDMEK 84
Score = 45.6 bits (103), Expect = 2e-05
Identities = 16/19 (84%), Positives = 18/19 (94%)
Frame = +1
Query: 340 KIWHHSFYNELRVGPDEHP 396
KIWHH+FYNELRV P+EHP
Sbjct: 84 KIWHHTFYNELRVAPEEHP 102
>SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 411
Score = 78.6 bits (185), Expect = 2e-15
Identities = 37/80 (46%), Positives = 52/80 (65%), Gaps = 2/80 (2%)
Frame = +3
Query: 105 AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP--RHQGVMVGMGQKDSYVGDEAQSKRG 278
+ +V DNG+G K G+AG + P +FPS+VGRP R + + KD VGDEA R
Sbjct: 7 SVIVCDNGTGFVKCGYAGSNFPAHIFPSMVGRPIIRSSQKVGDIEVKDLMVGDEASQLRY 66
Query: 279 ILTLKYPIEHGIVTNWDDME 338
+L + YP+++GIV NWDDM+
Sbjct: 67 MLEVNYPMDNGIVRNWDDMK 86
>SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12)
Length = 1392
Score = 59.7 bits (138), Expect = 9e-10
Identities = 27/39 (69%), Positives = 29/39 (74%)
Frame = +3
Query: 96 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 212
E LV+D GS M K GFAGDDAP+ VFP IVGRPRHQ
Sbjct: 1354 EAPTPLVIDVGSHMWKVGFAGDDAPKGVFPPIVGRPRHQ 1392
>SB_54| Best HMM Match : Actin (HMM E-Value=0)
Length = 2486
Score = 59.7 bits (138), Expect = 9e-10
Identities = 23/34 (67%), Positives = 30/34 (88%)
Frame = +3
Query: 111 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 212
+V+DNGSG CKAG + D++PR VFP+IVGRPRH+
Sbjct: 2097 VVIDNGSGFCKAGLSTDESPRVVFPAIVGRPRHK 2130
>SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022)
Length = 921
Score = 56.8 bits (131), Expect = 6e-09
Identities = 29/73 (39%), Positives = 44/73 (60%), Gaps = 3/73 (4%)
Frame = +3
Query: 81 FKMCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVG--MGQKD-SYV 251
FK+ A+V+DNG G+ K GFAGD PR + P++VG P+ +++G + KD
Sbjct: 693 FKLDSHYNRAIVLDNGCGISKIGFAGDRVPRIIQPAVVGNPQRFSMLIGDNVNVKDYKKY 752
Query: 252 GDEAQSKRGILTL 290
GD A +K G++ L
Sbjct: 753 GDAAVAKSGVMHL 765
>SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 198
Score = 41.9 bits (94), Expect = 2e-04
Identities = 21/39 (53%), Positives = 27/39 (69%)
Frame = -3
Query: 209 MAGPSHDRGEHGARSIISCETGLAHTGAIVYYQRGNFFV 93
MA + D GE+G+ SI+S ETGLAHTGAI+ Q + V
Sbjct: 1 MARSADDGGENGSGSIVSGETGLAHTGAIIDNQSCDIIV 39
>SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011)
Length = 580
Score = 38.3 bits (85), Expect = 0.002
Identities = 22/79 (27%), Positives = 43/79 (54%), Gaps = 2/79 (2%)
Frame = +3
Query: 99 EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRG 278
++A LV+D G+ K GFA + APR++ P+ + + + + ++ ++GD+ + +
Sbjct: 232 KMATLVLDCGACSQKIGFASNQAPRSI-PNAIFKAKSE-------RRKLFIGDQIEECKD 283
Query: 279 ILTLKY--PIEHGIVTNWD 329
L Y P + G + NWD
Sbjct: 284 YSALFYVLPFQKGFLVNWD 302
>SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6)
Length = 372
Score = 37.5 bits (83), Expect = 0.004
Identities = 18/38 (47%), Positives = 23/38 (60%)
Frame = +3
Query: 225 GMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDME 338
G+ D ++GDEA K T K+PI H IV +WD ME
Sbjct: 278 GVEDLDFFIGDEAIDKPSYAT-KWPIRHAIVEDWDLME 314
>SB_37540| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 120
Score = 31.5 bits (68), Expect = 0.27
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = -1
Query: 184 GNTARGASSPAKPALHIPEPLSTT 113
GNT R PAKPAL++P P S T
Sbjct: 80 GNTNRRTRIPAKPALNLPSPPSKT 103
>SB_18097| Best HMM Match : NadA (HMM E-Value=2.2)
Length = 272
Score = 31.5 bits (68), Expect = 0.27
Identities = 24/68 (35%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Frame = -3
Query: 332 VIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIIS 156
V+PV S D + S +C V+LSH + H M D +HG RS S
Sbjct: 193 VVPVFKKSSKDNPENYRPISLTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFS 251
Query: 155 CETGLAHT 132
CET L T
Sbjct: 252 CETQLVPT 259
>SB_5400| Best HMM Match : DUF1153 (HMM E-Value=7.8)
Length = 170
Score = 31.5 bits (68), Expect = 0.27
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = -1
Query: 184 GNTARGASSPAKPALHIPEPLSTT 113
GNT R PAKPAL++P P S T
Sbjct: 80 GNTNRRTRIPAKPALNLPSPPSKT 103
>SB_21074| Best HMM Match : NadA (HMM E-Value=2)
Length = 358
Score = 31.1 bits (67), Expect = 0.36
Identities = 24/68 (35%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Frame = -3
Query: 332 VIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIIS 156
V+PV S D + S +C V+LSH + H M D +HG RS S
Sbjct: 251 VVPVFKKSSKDNPENYRPISLTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFS 309
Query: 155 CETGLAHT 132
CET L T
Sbjct: 310 CETQLVLT 317
>SB_38372| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 402
Score = 31.1 bits (67), Expect = 0.36
Identities = 24/68 (35%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Frame = -3
Query: 332 VIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIIS 156
V+PV S D + S +C V+LSH + H M D +HG RS S
Sbjct: 71 VVPVFKKSSKDNPENYRPISLTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFS 129
Query: 155 CETGLAHT 132
CET L T
Sbjct: 130 CETQLVLT 137
>SB_2458| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 458
Score = 31.1 bits (67), Expect = 0.36
Identities = 24/68 (35%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Frame = -3
Query: 332 VIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIIS 156
V+PV S D + S +C V+LSH + H M D +HG RS S
Sbjct: 105 VVPVFKKSSKDNPENYRPISLTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFS 163
Query: 155 CETGLAHT 132
CET L T
Sbjct: 164 CETQLVLT 171
>SB_47621| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 591
Score = 30.7 bits (66), Expect = 0.47
Identities = 24/68 (35%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Frame = -3
Query: 332 VIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIIS 156
V+PV S D + S +C V+LSH + H M D +HG RS S
Sbjct: 388 VVPVFKKSGKDNPENYRPISLTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFS 446
Query: 155 CETGLAHT 132
CET L T
Sbjct: 447 CETQLVLT 454
>SB_15522| Best HMM Match : DUF590 (HMM E-Value=5.8)
Length = 339
Score = 30.7 bits (66), Expect = 0.47
Identities = 24/68 (35%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Frame = -3
Query: 332 VIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIIS 156
V+PV S D + S +C V+LSH + H M D +HG RS S
Sbjct: 229 VVPVFKKSGKDNPENYRPISLTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFS 287
Query: 155 CETGLAHT 132
CET L T
Sbjct: 288 CETQLVLT 295
>SB_4310| Best HMM Match : RVT_1 (HMM E-Value=5e-28)
Length = 570
Score = 30.7 bits (66), Expect = 0.47
Identities = 23/68 (33%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Frame = -3
Query: 332 VIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIIS 156
V+PV S D + S +C ++LSH + H M D +HG RS S
Sbjct: 153 VVPVFKKSSKDNPENYRPISLTCICCKVMEHIVLSHLNSHTAMNNILSDL-QHGFRSGFS 211
Query: 155 CETGLAHT 132
CET L T
Sbjct: 212 CETQLVLT 219
>SB_35780| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 749
Score = 30.3 bits (65), Expect = 0.62
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = -1
Query: 184 GNTARGASSPAKPALHIPEPLSTT 113
GNT R PAKP+L++P P S T
Sbjct: 540 GNTNRRTRIPAKPSLNLPSPPSKT 563
>SB_38460| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 181
Score = 29.9 bits (64), Expect = 0.82
Identities = 18/45 (40%), Positives = 22/45 (48%)
Frame = -3
Query: 266 LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 132
+C V+LSH + H M D +HG RS SCET L T
Sbjct: 94 ICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 137
>SB_56449| Best HMM Match : RVT_1 (HMM E-Value=0.28)
Length = 419
Score = 29.1 bits (62), Expect = 1.4
Identities = 22/68 (32%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Frame = -3
Query: 332 VIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIIS 156
V+PV S D + S +C ++LSH + H L A +HG R +S
Sbjct: 222 VVPVHKKSAKDQPQNYRPISLTCICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALS 280
Query: 155 CETGLAHT 132
CET L T
Sbjct: 281 CETQLVLT 288
>SB_2746| Best HMM Match : RVT_1 (HMM E-Value=1.10002e-42)
Length = 330
Score = 29.1 bits (62), Expect = 1.4
Identities = 22/68 (32%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Frame = -3
Query: 332 VIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIIS 156
V+PV S D + S +C ++LSH + H L A +HG R +S
Sbjct: 83 VVPVHKKSAKDQPQNYRPISLTCICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALS 141
Query: 155 CETGLAHT 132
CET L T
Sbjct: 142 CETQLVLT 149
>SB_2102| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2396
Score = 29.1 bits (62), Expect = 1.4
Identities = 22/68 (32%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Frame = -3
Query: 332 VIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIIS 156
V+PV S D + S +C ++LSH + H L A +HG R +S
Sbjct: 1621 VVPVHKKSAKDQPQNYRPISLTCICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALS 1679
Query: 155 CETGLAHT 132
CET L T
Sbjct: 1680 CETQLVLT 1687
>SB_55880| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 859
Score = 29.1 bits (62), Expect = 1.4
Identities = 22/68 (32%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Frame = -3
Query: 332 VIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIIS 156
V+PV S D + S +C ++LSH + H L A +HG R +S
Sbjct: 649 VVPVHKKSAKDQPQNYRPISLTCICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALS 707
Query: 155 CETGLAHT 132
CET L T
Sbjct: 708 CETQLVLT 715
>SB_24270| Best HMM Match : DUF1604 (HMM E-Value=5.2)
Length = 329
Score = 29.1 bits (62), Expect = 1.4
Identities = 22/68 (32%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Frame = -3
Query: 332 VIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIIS 156
V+PV S D + S +C ++LSH + H L A +HG R +S
Sbjct: 204 VVPVHKKSAKDQPQNYRPISLTCICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALS 262
Query: 155 CETGLAHT 132
CET L T
Sbjct: 263 CETQLVLT 270
>SB_11764| Best HMM Match : DSHCT (HMM E-Value=1.9e-27)
Length = 1492
Score = 29.1 bits (62), Expect = 1.4
Identities = 22/68 (32%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Frame = -3
Query: 332 VIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIIS 156
V+PV S D + S +C ++LSH + H L A +HG R +S
Sbjct: 1059 VVPVHKKSAKDQPQNYRPISLTCICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALS 1117
Query: 155 CETGLAHT 132
CET L T
Sbjct: 1118 CETQLVLT 1125
>SB_10927| Best HMM Match : RVT_1 (HMM E-Value=6.6e-39)
Length = 452
Score = 29.1 bits (62), Expect = 1.4
Identities = 22/68 (32%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Frame = -3
Query: 332 VIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIIS 156
V+PV S D + S +C ++LSH + H L A +HG R +S
Sbjct: 2 VVPVHKKSAKDQPQNYRPISLTCICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALS 60
Query: 155 CETGLAHT 132
CET L T
Sbjct: 61 CETQLVLT 68
>SB_5114| Best HMM Match : RVT_1 (HMM E-Value=1.10002e-42)
Length = 330
Score = 29.1 bits (62), Expect = 1.4
Identities = 22/68 (32%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Frame = -3
Query: 332 VIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIIS 156
V+PV S D + S +C ++LSH + H L A +HG R +S
Sbjct: 83 VVPVHKKSAKDQPQNYRPISLTCICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALS 141
Query: 155 CETGLAHT 132
CET L T
Sbjct: 142 CETQLVLT 149
>SB_28979| Best HMM Match : RVT_1 (HMM E-Value=1.6e-40)
Length = 892
Score = 28.7 bits (61), Expect = 1.9
Identities = 24/69 (34%), Positives = 32/69 (46%), Gaps = 5/69 (7%)
Frame = -3
Query: 272 FALCLISYI--RVLLSHTDHHALMAGPSHDRGEHGARSIISCETGL---AHTGAIVYYQR 108
FA CL + V+LSH + H L A +HG R+ SCET L H A + +
Sbjct: 462 FATCLACKVMKHVVLSHLNKH-LAAHNIISNLQHGFRAGFSCETQLILAVHDWASILNKH 520
Query: 107 GNFFVAHLE 81
G V L+
Sbjct: 521 GQVDVLLLD 529
>SB_20462| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 130
Score = 28.3 bits (60), Expect = 2.5
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = -1
Query: 184 GNTARGASSPAKPALHIPEPLSTT 113
GNT R AKPAL++P P S T
Sbjct: 40 GNTNRRTRIQAKPALNLPSPPSKT 63
>SB_11603| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 635
Score = 28.3 bits (60), Expect = 2.5
Identities = 13/24 (54%), Positives = 14/24 (58%)
Frame = -1
Query: 184 GNTARGASSPAKPALHIPEPLSTT 113
GNT R PAKP L IP P + T
Sbjct: 68 GNTNRRTRIPAKPTLTIPSPPTKT 91
>SB_22432| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 285
Score = 27.5 bits (58), Expect = 4.4
Identities = 12/37 (32%), Positives = 21/37 (56%)
Frame = -1
Query: 199 LPTIEGNTARGASSPAKPALHIPEPLSTTNAATSSSH 89
L IE + A++P P + +P+ + +AAT +SH
Sbjct: 222 LRRIERSNIPQATAPGTPGVPVPQAVHGVSAATQASH 258
>SB_43973| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3142
Score = 27.5 bits (58), Expect = 4.4
Identities = 16/45 (35%), Positives = 22/45 (48%)
Frame = -3
Query: 266 LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 132
LC + ++LSH + H L +HG R +SCET L T
Sbjct: 857 LCCKTMEHIVLSHLNKH-LSRFNILSNAQHGFRQGLSCETQLVLT 900
>SB_30175| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 617
Score = 27.5 bits (58), Expect = 4.4
Identities = 15/51 (29%), Positives = 25/51 (49%), Gaps = 2/51 (3%)
Frame = -2
Query: 255 LLHKSPSVPYRPS--RPDGGAFPRSRGTRREEHHLLRNRPCTYRSHCLLPT 109
LL +S P +P+ RP GGA P++ ++ + N+ T+ PT
Sbjct: 92 LLDESTEAPPQPATIRPQGGALPQTPVKGKQNKRVSDNKEFTHAMQARRPT 142
>SB_26826| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 221
Score = 27.5 bits (58), Expect = 4.4
Identities = 18/57 (31%), Positives = 25/57 (43%)
Frame = -2
Query: 261 PHLLHKSPSVPYRPSRPDGGAFPRSRGTRREEHHLLRNRPCTYRSHCLLPTRQLLRR 91
P L +P + RPS + S + LL RP TYR+ LP+ LL +
Sbjct: 131 PLYLPSAPLLTERPSTYRAPLYLPSAPSTYRAPLLLTERPSTYRAPLYLPSTPLLTK 187
>SB_28400| Best HMM Match : PMSR (HMM E-Value=1.7e-24)
Length = 766
Score = 27.1 bits (57), Expect = 5.8
Identities = 12/35 (34%), Positives = 22/35 (62%)
Frame = +3
Query: 105 AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRH 209
+ +++D GS KAGFA ++A + + S++G H
Sbjct: 483 SVIIIDLGSSSVKAGFAQEEA-QVFYISLIGILEH 516
>SB_222| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2323
Score = 27.1 bits (57), Expect = 5.8
Identities = 17/44 (38%), Positives = 19/44 (43%)
Frame = -1
Query: 277 PLLLCASSPT*ESFCPIPTITP*WRGLPTIEGNTARGASSPAKP 146
P C S P F +P P W LP+ E N G SS A P
Sbjct: 2225 PRAECESDPVDSLFSEVP---PEWSTLPSPEQNAFGGDSSWASP 2265
>SB_35006| Best HMM Match : PT (HMM E-Value=3.4)
Length = 325
Score = 26.6 bits (56), Expect = 7.7
Identities = 15/36 (41%), Positives = 21/36 (58%)
Frame = -1
Query: 298 GYLRVRIPLLLCASSPT*ESFCPIPTITP*WRGLPT 191
G + +++ LLL +SSP S PI TP +GL T
Sbjct: 275 GVIDIKLNLLLLSSSPMFLSAVPIAPHTPTLQGLHT 310
>SB_12742| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1077
Score = 26.6 bits (56), Expect = 7.7
Identities = 10/27 (37%), Positives = 17/27 (62%), Gaps = 1/27 (3%)
Frame = +3
Query: 84 KMCDEEVAALVVDNG-SGMCKAGFAGD 161
++CD++ + +N MCKAG+ GD
Sbjct: 487 RLCDKDAVCRLENNAIKCMCKAGYTGD 513
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,333,235
Number of Sequences: 59808
Number of extensions: 323978
Number of successful extensions: 875
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 763
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 871
length of database: 16,821,457
effective HSP length: 75
effective length of database: 12,335,857
effective search space used: 727815563
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -