Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--2029
(406 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 183 4e-47
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 183 4e-47
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 183 4e-47
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 183 4e-47
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 183 4e-47
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 183 4e-47
J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein ( C.ele... 183 4e-47
J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein ( C.ele... 183 4e-47
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 182 9e-47
J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein ( C.ele... 182 9e-47
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 180 3e-46
J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein ( C.ele... 180 5e-46
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 177 3e-45
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 144 2e-35
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 96 7e-21
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 91 4e-19
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 76 8e-15
AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 60 6e-10
Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical pr... 38 0.004
U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related p... 38 0.004
AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical ... 33 0.059
U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical p... 33 0.10
U41278-7|AAT81193.1| 680|Caenorhabditis elegans Hypothetical pr... 30 0.73
U41278-6|AAK31510.3| 771|Caenorhabditis elegans Hypothetical pr... 30 0.73
AF025453-5|AAY55851.1| 279|Caenorhabditis elegans Hypothetical ... 28 2.9
Z49968-1|CAA90258.2| 499|Caenorhabditis elegans Hypothetical pr... 27 3.9
AF188477-1|AAF01458.1| 1418|Caenorhabditis elegans phospholipase... 27 3.9
AF179426-1|AAF05701.1| 1431|Caenorhabditis elegans phospholipase... 27 3.9
AF068714-6|AAL77167.1| 1419|Caenorhabditis elegans Egg laying de... 27 3.9
AF068714-5|AAL77168.1| 1431|Caenorhabditis elegans Egg laying de... 27 3.9
AC025724-1|AAG23375.2| 4177|Caenorhabditis elegans Enhancer of e... 27 3.9
Z35719-8|CAA84801.1| 1521|Caenorhabditis elegans Hypothetical pr... 27 5.1
Z35663-17|CAA84737.1| 1521|Caenorhabditis elegans Hypothetical p... 27 5.1
D14635-1|BAA03484.1| 1521|Caenorhabditis elegans EMB-5 protein. 27 5.1
AF016440-6|AAN84798.1| 525|Caenorhabditis elegans Hypothetical ... 27 5.1
AF016440-5|AAB65904.2| 535|Caenorhabditis elegans Hypothetical ... 27 5.1
Z68105-6|CAA92119.4| 1340|Caenorhabditis elegans Hypothetical pr... 26 9.0
Z68010-4|CAJ76939.1| 1340|Caenorhabditis elegans Hypothetical pr... 26 9.0
AY436362-1|AAR30497.1| 1293|Caenorhabditis elegans RhoGEF protein. 26 9.0
AL110479-29|CAB60311.2| 1044|Caenorhabditis elegans Hypothetical... 26 9.0
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 183 bits (446), Expect = 4e-47
Identities = 83/85 (97%), Positives = 85/85 (100%)
Frame = +3
Query: 87 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 266
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 267 SKRGILTLKYPIEHGIVTNWDDMEE 341
SKRGILTLKYPIEHGIVTNWDDME+
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEK 85
Score = 45.6 bits (103), Expect = 1e-05
Identities = 16/19 (84%), Positives = 18/19 (94%)
Frame = +1
Query: 340 KIWHHSFYNELRVGPDEHP 396
KIWHH+FYNELRV P+EHP
Sbjct: 85 KIWHHTFYNELRVAPEEHP 103
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 183 bits (446), Expect = 4e-47
Identities = 83/85 (97%), Positives = 85/85 (100%)
Frame = +3
Query: 87 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 266
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 267 SKRGILTLKYPIEHGIVTNWDDMEE 341
SKRGILTLKYPIEHGIVTNWDDME+
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEK 85
Score = 45.6 bits (103), Expect = 1e-05
Identities = 16/19 (84%), Positives = 18/19 (94%)
Frame = +1
Query: 340 KIWHHSFYNELRVGPDEHP 396
KIWHH+FYNELRV P+EHP
Sbjct: 85 KIWHHTFYNELRVAPEEHP 103
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 183 bits (446), Expect = 4e-47
Identities = 83/85 (97%), Positives = 85/85 (100%)
Frame = +3
Query: 87 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 266
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 267 SKRGILTLKYPIEHGIVTNWDDMEE 341
SKRGILTLKYPIEHGIVTNWDDME+
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEK 85
Score = 45.6 bits (103), Expect = 1e-05
Identities = 16/19 (84%), Positives = 18/19 (94%)
Frame = +1
Query: 340 KIWHHSFYNELRVGPDEHP 396
KIWHH+FYNELRV P+EHP
Sbjct: 85 KIWHHTFYNELRVAPEEHP 103
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 183 bits (446), Expect = 4e-47
Identities = 83/85 (97%), Positives = 85/85 (100%)
Frame = +3
Query: 87 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 266
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 267 SKRGILTLKYPIEHGIVTNWDDMEE 341
SKRGILTLKYPIEHGIVTNWDDME+
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEK 85
Score = 45.6 bits (103), Expect = 1e-05
Identities = 16/19 (84%), Positives = 18/19 (94%)
Frame = +1
Query: 340 KIWHHSFYNELRVGPDEHP 396
KIWHH+FYNELRV P+EHP
Sbjct: 85 KIWHHTFYNELRVAPEEHP 103
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 183 bits (446), Expect = 4e-47
Identities = 83/85 (97%), Positives = 85/85 (100%)
Frame = +3
Query: 87 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 266
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 267 SKRGILTLKYPIEHGIVTNWDDMEE 341
SKRGILTLKYPIEHGIVTNWDDME+
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEK 85
Score = 45.6 bits (103), Expect = 1e-05
Identities = 16/19 (84%), Positives = 18/19 (94%)
Frame = +1
Query: 340 KIWHHSFYNELRVGPDEHP 396
KIWHH+FYNELRV P+EHP
Sbjct: 85 KIWHHTFYNELRVAPEEHP 103
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 183 bits (446), Expect = 4e-47
Identities = 83/85 (97%), Positives = 85/85 (100%)
Frame = +3
Query: 87 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 266
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 267 SKRGILTLKYPIEHGIVTNWDDMEE 341
SKRGILTLKYPIEHGIVTNWDDME+
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEK 85
Score = 45.6 bits (103), Expect = 1e-05
Identities = 16/19 (84%), Positives = 18/19 (94%)
Frame = +1
Query: 340 KIWHHSFYNELRVGPDEHP 396
KIWHH+FYNELRV P+EHP
Sbjct: 85 KIWHHTFYNELRVAPEEHP 103
>J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene III, 5' end. ).
Length = 86
Score = 183 bits (446), Expect = 4e-47
Identities = 83/85 (97%), Positives = 85/85 (100%)
Frame = +3
Query: 87 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 266
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 267 SKRGILTLKYPIEHGIVTNWDDMEE 341
SKRGILTLKYPIEHGIVTNWDDME+
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEK 85
>J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene I, 5' end. ).
Length = 86
Score = 183 bits (446), Expect = 4e-47
Identities = 83/85 (97%), Positives = 85/85 (100%)
Frame = +3
Query: 87 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 266
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 267 SKRGILTLKYPIEHGIVTNWDDMEE 341
SKRGILTLKYPIEHGIVTNWDDME+
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEK 85
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 182 bits (443), Expect = 9e-47
Identities = 82/85 (96%), Positives = 85/85 (100%)
Frame = +3
Query: 87 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 266
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 267 SKRGILTLKYPIEHGIVTNWDDMEE 341
SKRGILTLKYPIEHGIVTNWDDME+
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEK 85
Score = 45.6 bits (103), Expect = 1e-05
Identities = 16/19 (84%), Positives = 18/19 (94%)
Frame = +1
Query: 340 KIWHHSFYNELRVGPDEHP 396
KIWHH+FYNELRV P+EHP
Sbjct: 85 KIWHHTFYNELRVAPEEHP 103
>J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene IV, 5' end. ).
Length = 86
Score = 182 bits (443), Expect = 9e-47
Identities = 82/85 (96%), Positives = 85/85 (100%)
Frame = +3
Query: 87 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 266
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 267 SKRGILTLKYPIEHGIVTNWDDMEE 341
SKRGILTLKYPIEHGIVTNWDDME+
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEK 85
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 180 bits (439), Expect = 3e-46
Identities = 80/85 (94%), Positives = 85/85 (100%)
Frame = +3
Query: 87 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 266
MCD++VAAL++DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDDVAALILDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 267 SKRGILTLKYPIEHGIVTNWDDMEE 341
SKRGILTLKYPIEHGIVTNWDDME+
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEK 85
Score = 45.6 bits (103), Expect = 1e-05
Identities = 16/19 (84%), Positives = 18/19 (94%)
Frame = +1
Query: 340 KIWHHSFYNELRVGPDEHP 396
KIWHH+FYNELRV P+EHP
Sbjct: 85 KIWHHTFYNELRVAPEEHP 103
>J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene II, 5' end. ).
Length = 83
Score = 180 bits (437), Expect = 5e-46
Identities = 81/83 (97%), Positives = 83/83 (100%)
Frame = +3
Query: 87 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 266
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 267 SKRGILTLKYPIEHGIVTNWDDM 335
SKRGILTLKYPIEHGIVTNWDDM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDM 83
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 177 bits (430), Expect = 3e-45
Identities = 80/83 (96%), Positives = 83/83 (100%)
Frame = +3
Query: 93 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 272
+EE+AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 2 EEEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
Query: 273 RGILTLKYPIEHGIVTNWDDMEE 341
RGILTLKYPIEHGIVTNWDDME+
Sbjct: 62 RGILTLKYPIEHGIVTNWDDMEK 84
Score = 45.2 bits (102), Expect = 2e-05
Identities = 15/19 (78%), Positives = 18/19 (94%)
Frame = +1
Query: 340 KIWHHSFYNELRVGPDEHP 396
KIWHH+FYNELR+ P+EHP
Sbjct: 84 KIWHHTFYNELRIAPEEHP 102
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 144 bits (350), Expect = 2e-35
Identities = 65/67 (97%), Positives = 67/67 (100%)
Frame = +3
Query: 141 KAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVT 320
+AGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVT
Sbjct: 5 RAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVT 64
Query: 321 NWDDMEE 341
NWDDME+
Sbjct: 65 NWDDMEK 71
Score = 45.6 bits (103), Expect = 1e-05
Identities = 16/19 (84%), Positives = 18/19 (94%)
Frame = +1
Query: 340 KIWHHSFYNELRVGPDEHP 396
KIWHH+FYNELRV P+EHP
Sbjct: 71 KIWHHTFYNELRVAPEEHP 89
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 96.3 bits (229), Expect = 7e-21
Identities = 39/77 (50%), Positives = 57/77 (74%)
Frame = +3
Query: 111 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 290
+V+DNGSG+ KAGFAG+ P+ F + VGRP++ VM G D ++G +A+S RG+ ++
Sbjct: 11 VVIDNGSGVIKAGFAGEQQPKVRFANFVGRPKYHRVMAGGLDGDIFIGPKAESNRGLFSI 70
Query: 291 KYPIEHGIVTNWDDMEE 341
+YP+EHGIV NW DME+
Sbjct: 71 EYPMEHGIVNNWSDMEK 87
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 90.6 bits (215), Expect = 4e-19
Identities = 40/41 (97%), Positives = 41/41 (100%)
Frame = +3
Query: 219 MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEE 341
MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDME+
Sbjct: 1 MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEK 41
Score = 45.6 bits (103), Expect = 1e-05
Identities = 16/19 (84%), Positives = 18/19 (94%)
Frame = +1
Query: 340 KIWHHSFYNELRVGPDEHP 396
KIWHH+FYNELRV P+EHP
Sbjct: 41 KIWHHTFYNELRVAPEEHP 59
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical
protein K07C5.1 protein.
Length = 395
Score = 76.2 bits (179), Expect = 8e-15
Identities = 36/77 (46%), Positives = 50/77 (64%), Gaps = 2/77 (2%)
Frame = +3
Query: 111 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP--RHQGVMVGMGQKDSYVGDEAQSKRGIL 284
+VVDNG+G K G+AG + P +FPS+VGRP R + + KD VG+E R +L
Sbjct: 9 IVVDNGTGFVKCGYAGTNFPAHIFPSMVGRPIVRSTQRVGNIEIKDLMVGEECSQLRQML 68
Query: 285 TLKYPIEHGIVTNWDDM 335
+ YP+++GIV NWDDM
Sbjct: 69 DINYPMDNGIVRNWDDM 85
>AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex
component protein 1 protein.
Length = 425
Score = 60.1 bits (139), Expect = 6e-10
Identities = 37/97 (38%), Positives = 50/97 (51%), Gaps = 13/97 (13%)
Frame = +3
Query: 87 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSI------VGRPRHQG------VMVGM 230
M ++ A V+DNG+G K G+AG+ P+ + PS V Q V G+
Sbjct: 1 MSAHQLPACVIDNGTGYTKLGYAGNTEPQFIIPSAIAVKDKVASSNSQAMRWNNRVGAGI 60
Query: 231 GQKDSYVGDEAQSKRGI-LTLKYPIEHGIVTNWDDME 338
D ++GDEA S T+KYPI HGIV +WD ME
Sbjct: 61 DDLDFFIGDEALSPAATNYTVKYPIRHGIVEDWDLME 97
>Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical
protein C08B11.6 protein.
Length = 418
Score = 37.5 bits (83), Expect = 0.004
Identities = 23/80 (28%), Positives = 39/80 (48%)
Frame = +3
Query: 102 VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGI 281
+ ++ DNG K G ++PR V SIV + +H+ V + + +E K +
Sbjct: 3 LTTIIFDNGGHNMKIGTIDSESPRLVPNSIV-KAKHEKKRVFVAHEQ----EECSDKFSL 57
Query: 282 LTLKYPIEHGIVTNWDDMEE 341
++ PIE G V NWD ++
Sbjct: 58 FYVR-PIERGYVVNWDTQQQ 76
>U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related
protein-like protein.
Length = 418
Score = 37.5 bits (83), Expect = 0.004
Identities = 23/80 (28%), Positives = 39/80 (48%)
Frame = +3
Query: 102 VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGI 281
+ ++ DNG K G ++PR V SIV + +H+ V + + +E K +
Sbjct: 3 LTTIIFDNGGHNMKIGTIDSESPRLVPNSIV-KAKHEKKRVFVAHEQ----EECSDKFSL 57
Query: 282 LTLKYPIEHGIVTNWDDMEE 341
++ PIE G V NWD ++
Sbjct: 58 FYVR-PIERGYVVNWDTQQQ 76
>AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical
protein ZK616.4 protein.
Length = 436
Score = 33.5 bits (73), Expect = 0.059
Identities = 14/33 (42%), Positives = 21/33 (63%)
Frame = +3
Query: 96 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIV 194
+EV+ LV D GS + GFAG++ P+ PS +
Sbjct: 9 DEVSGLVFDAGSQSFRVGFAGEEYPKGDIPSYI 41
>U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical
protein T19D12.1 protein.
Length = 1844
Score = 32.7 bits (71), Expect = 0.10
Identities = 23/76 (30%), Positives = 34/76 (44%), Gaps = 1/76 (1%)
Frame = -1
Query: 316 TIPCSMGYLRVRIPLLLCASSPT*ESFCPIPTITP*WRGLPTIEGN-TARGASSPAKPAL 140
T+ S PL++ +SS S TITP +G+PT N S+P P
Sbjct: 451 TLTLSQSPTPTSTPLVVSSSSSGSSSTVVTSTITPSTQGVPTSTSNQPTPSTSNPTTPKS 510
Query: 139 HIPEPLSTTNAATSSS 92
+ STT A +++S
Sbjct: 511 TVTASPSTTGATSTAS 526
>U41278-7|AAT81193.1| 680|Caenorhabditis elegans Hypothetical
protein F33G12.6b protein.
Length = 680
Score = 29.9 bits (64), Expect = 0.73
Identities = 15/53 (28%), Positives = 24/53 (45%), Gaps = 1/53 (1%)
Frame = -2
Query: 273 FCSVPHLLHKSPSVPYRPSRPDGGAFPRSRGTRREEH-HLLRNRPCTYRSHCL 118
FC + H++ + P R D +RG +++H RNRPC C+
Sbjct: 393 FCVIKKSEHENKENAHLPPREDRTLDVTTRGGEKDKHSEYARNRPCAASLPCV 445
>U41278-6|AAK31510.3| 771|Caenorhabditis elegans Hypothetical
protein F33G12.6a protein.
Length = 771
Score = 29.9 bits (64), Expect = 0.73
Identities = 15/53 (28%), Positives = 24/53 (45%), Gaps = 1/53 (1%)
Frame = -2
Query: 273 FCSVPHLLHKSPSVPYRPSRPDGGAFPRSRGTRREEH-HLLRNRPCTYRSHCL 118
FC + H++ + P R D +RG +++H RNRPC C+
Sbjct: 393 FCVIKKSEHENKENAHLPPREDRTLDVTTRGGEKDKHSEYARNRPCAASLPCV 445
>AF025453-5|AAY55851.1| 279|Caenorhabditis elegans Hypothetical
protein C08F1.11 protein.
Length = 279
Score = 27.9 bits (59), Expect = 2.9
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +3
Query: 141 KAGFAGDDAPRAVFPSIVGRPRHQG 215
KA + G D P+A F I+G ++G
Sbjct: 44 KASYLGHDTPQATFREIIGNKEYRG 68
>Z49968-1|CAA90258.2| 499|Caenorhabditis elegans Hypothetical
protein M110.1 protein.
Length = 499
Score = 27.5 bits (58), Expect = 3.9
Identities = 12/17 (70%), Positives = 13/17 (76%)
Frame = +2
Query: 191 RGKAPPSGRDGRYGTEG 241
RGKA +GRDGR G EG
Sbjct: 216 RGKAGHTGRDGRPGLEG 232
>AF188477-1|AAF01458.1| 1418|Caenorhabditis elegans phospholipase C
beta protein.
Length = 1418
Score = 27.5 bits (58), Expect = 3.9
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = -1
Query: 166 ASSPAKPALHIPEPLSTTNAATSS 95
+SSPA P++ P P +T++ +TSS
Sbjct: 652 SSSPATPSISGPPPCATSSGSTSS 675
>AF179426-1|AAF05701.1| 1431|Caenorhabditis elegans phospholipase C
beta homolog EGL-8 protein.
Length = 1431
Score = 27.5 bits (58), Expect = 3.9
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = -1
Query: 166 ASSPAKPALHIPEPLSTTNAATSS 95
+SSPA P++ P P +T++ +TSS
Sbjct: 653 SSSPATPSISGPPPCATSSGSTSS 676
>AF068714-6|AAL77167.1| 1419|Caenorhabditis elegans Egg laying
defective protein 8,isoform a protein.
Length = 1419
Score = 27.5 bits (58), Expect = 3.9
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = -1
Query: 166 ASSPAKPALHIPEPLSTTNAATSS 95
+SSPA P++ P P +T++ +TSS
Sbjct: 653 SSSPATPSISGPPPCATSSGSTSS 676
>AF068714-5|AAL77168.1| 1431|Caenorhabditis elegans Egg laying
defective protein 8,isoform b protein.
Length = 1431
Score = 27.5 bits (58), Expect = 3.9
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = -1
Query: 166 ASSPAKPALHIPEPLSTTNAATSS 95
+SSPA P++ P P +T++ +TSS
Sbjct: 653 SSSPATPSISGPPPCATSSGSTSS 676
>AC025724-1|AAG23375.2| 4177|Caenorhabditis elegans Enhancer of
efl-1 mutant phenotypeprotein 1 protein.
Length = 4177
Score = 27.5 bits (58), Expect = 3.9
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = -3
Query: 326 PVSDDSVFDGVFEGQDTSFALCLISYIRVLLSHTDHH 216
PVS DSV F +D CL+S +R+L++ D H
Sbjct: 232 PVSSDSVPSQQFSKEDL---YCLLSRVRMLVTFEDWH 265
>Z35719-8|CAA84801.1| 1521|Caenorhabditis elegans Hypothetical
protein T04A8.14 protein.
Length = 1521
Score = 27.1 bits (57), Expect = 5.1
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +3
Query: 255 DEAQSKRGILTLKYPIEHGIVTNWDDMEED 344
DE +S+ + +KY E G VTN D+++D
Sbjct: 298 DELESE-ALWIIKYAFEEGTVTNQADLDQD 326
>Z35663-17|CAA84737.1| 1521|Caenorhabditis elegans Hypothetical
protein T04A8.14 protein.
Length = 1521
Score = 27.1 bits (57), Expect = 5.1
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +3
Query: 255 DEAQSKRGILTLKYPIEHGIVTNWDDMEED 344
DE +S+ + +KY E G VTN D+++D
Sbjct: 298 DELESE-ALWIIKYAFEEGTVTNQADLDQD 326
>D14635-1|BAA03484.1| 1521|Caenorhabditis elegans EMB-5 protein.
Length = 1521
Score = 27.1 bits (57), Expect = 5.1
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +3
Query: 255 DEAQSKRGILTLKYPIEHGIVTNWDDMEED 344
DE +S+ + +KY E G VTN D+++D
Sbjct: 298 DELESE-ALWIIKYAFEEGTVTNQADLDQD 326
>AF016440-6|AAN84798.1| 525|Caenorhabditis elegans Hypothetical
protein F29G9.2b protein.
Length = 525
Score = 27.1 bits (57), Expect = 5.1
Identities = 13/29 (44%), Positives = 20/29 (68%), Gaps = 2/29 (6%)
Frame = +3
Query: 312 IVTNWDDMEEDLASFLLQ*AA--CRPRRT 392
++TN+D+M ED A L++ A+ CRP T
Sbjct: 471 VLTNFDNMSEDCAPRLMRSASETCRPTTT 499
>AF016440-5|AAB65904.2| 535|Caenorhabditis elegans Hypothetical
protein F29G9.2a protein.
Length = 535
Score = 27.1 bits (57), Expect = 5.1
Identities = 13/29 (44%), Positives = 20/29 (68%), Gaps = 2/29 (6%)
Frame = +3
Query: 312 IVTNWDDMEEDLASFLLQ*AA--CRPRRT 392
++TN+D+M ED A L++ A+ CRP T
Sbjct: 481 VLTNFDNMSEDCAPRLMRSASETCRPTTT 509
>Z68105-6|CAA92119.4| 1340|Caenorhabditis elegans Hypothetical
protein F13E6.6 protein.
Length = 1340
Score = 26.2 bits (55), Expect = 9.0
Identities = 13/50 (26%), Positives = 23/50 (46%)
Frame = +3
Query: 204 RHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEEDLAS 353
RH+ V DS +G E RG+++ + + + + T + ED S
Sbjct: 568 RHEQPNVKSTSSDSGIGGEHNMDRGLVSRSHSMRYRVATLPQSLSEDKVS 617
>Z68010-4|CAJ76939.1| 1340|Caenorhabditis elegans Hypothetical
protein F13E6.6 protein.
Length = 1340
Score = 26.2 bits (55), Expect = 9.0
Identities = 13/50 (26%), Positives = 23/50 (46%)
Frame = +3
Query: 204 RHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEEDLAS 353
RH+ V DS +G E RG+++ + + + + T + ED S
Sbjct: 568 RHEQPNVKSTSSDSGIGGEHNMDRGLVSRSHSMRYRVATLPQSLSEDKVS 617
>AY436362-1|AAR30497.1| 1293|Caenorhabditis elegans RhoGEF protein.
Length = 1293
Score = 26.2 bits (55), Expect = 9.0
Identities = 13/50 (26%), Positives = 23/50 (46%)
Frame = +3
Query: 204 RHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEEDLAS 353
RH+ V DS +G E RG+++ + + + + T + ED S
Sbjct: 521 RHEQPNVKSTSSDSGIGGEHNMDRGLVSRSHSMRYRVATLPQSLSEDKVS 570
>AL110479-29|CAB60311.2| 1044|Caenorhabditis elegans Hypothetical
protein Y105C5B.2 protein.
Length = 1044
Score = 26.2 bits (55), Expect = 9.0
Identities = 12/33 (36%), Positives = 17/33 (51%), Gaps = 3/33 (9%)
Frame = -2
Query: 285 SGYLFCSVP---HLLHKSPSVPYRPSRPDGGAF 196
SG +F +P HLL + P P P+G +F
Sbjct: 694 SGEIFLKLPELAHLLSSQSTAPLHPKVPEGNSF 726
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,232,855
Number of Sequences: 27780
Number of extensions: 220532
Number of successful extensions: 826
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 765
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 822
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 641068680
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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