Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--2025
         (650 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D pro...    26   0.23 
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    23   2.9  
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    22   3.8  
AF263514-1|AAF74206.1|  127|Tribolium castaneum cytochrome P450 ...    22   3.8  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    21   6.7  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    21   6.7  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    21   6.7  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    21   6.7  
EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4 prot...    21   8.8  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    21   8.8  

>EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D
           protein.
          Length = 255

 Score = 26.2 bits (55), Expect = 0.23
 Identities = 13/33 (39%), Positives = 17/33 (51%), Gaps = 1/33 (3%)
 Frame = +3

Query: 513 RCTRPVVPPVS-CWTPATVSPTPCPSTRDTHSP 608
           R  R VVPP   C  P+T+ P P     D++ P
Sbjct: 195 RSLRCVVPPTEDCDVPSTIPPPPPEEDDDSNIP 227


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 9/27 (33%), Positives = 13/27 (48%)
 Frame = +1

Query: 430 GQQREDDPDHVRNIQHARHVRRHPSRA 510
           GQ    DP+ V   +   H+  HP +A
Sbjct: 903 GQYTTKDPNEVTCDEEEGHISYHPDKA 929


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 10/23 (43%), Positives = 11/23 (47%)
 Frame = -3

Query: 405 SRRGVPRGRHAAHCRRYDAKSSP 337
           S RG P    AA C +   KS P
Sbjct: 31  SLRGTPLAMLAAQCNKLSNKSPP 53


>AF263514-1|AAF74206.1|  127|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 127

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = +2

Query: 284 PDPQIPHRTRNRH 322
           PD  +P RT NRH
Sbjct: 110 PDNFLPERTANRH 122


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 6/17 (35%), Positives = 11/17 (64%)
 Frame = -1

Query: 353 MPNLLHVIPVSDDSVFD 303
           +P++  +IP  DD+  D
Sbjct: 355 LPDISEIIPTGDDTTMD 371


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 6/17 (35%), Positives = 11/17 (64%)
 Frame = -1

Query: 353 MPNLLHVIPVSDDSVFD 303
           +P++  +IP  DD+  D
Sbjct: 355 LPDISEIIPTGDDTTMD 371


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 6/17 (35%), Positives = 11/17 (64%)
 Frame = -1

Query: 353 MPNLLHVIPVSDDSVFD 303
           +P++  +IP  DD+  D
Sbjct: 355 LPDISEIIPTGDDTTMD 371


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 6/17 (35%), Positives = 11/17 (64%)
 Frame = -1

Query: 353 MPNLLHVIPVSDDSVFD 303
           +P++  +IP  DD+  D
Sbjct: 355 LPDISEIIPTGDDTTMD 371


>EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4
           protein.
          Length = 475

 Score = 21.0 bits (42), Expect = 8.8
 Identities = 11/29 (37%), Positives = 12/29 (41%)
 Frame = +3

Query: 564 VSPTPCPSTRDTHSPTPFCVWTWPGRDLT 650
           V P P P    T  P+       P RDLT
Sbjct: 390 VEPVPQPVEEVTQKPSSTKAPAPPSRDLT 418


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 21.0 bits (42), Expect = 8.8
 Identities = 9/33 (27%), Positives = 13/33 (39%)
 Frame = -2

Query: 580 HGVGDTVAGVQHDTGGTTGRVQREHGLDGDVHG 482
           HG    V G+         ++  +H LD D  G
Sbjct: 600 HGYAFNVVGIGRSPDQNVKKINLKHALDLDRRG 632


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 169,236
Number of Sequences: 336
Number of extensions: 4246
Number of successful extensions: 20
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16760905
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)