Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--2025
(650 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC32H8.12c |act1|cps8|actin |Schizosaccharomyces pombe|chr 2||... 217 9e-58
SPBC1347.12 |||actin-like protein Arp1 |Schizosaccharomyces pomb... 118 7e-28
SPAC11H11.06 |arp2|SPAC22F8.01|ARP2/3 actin-organizing complex s... 109 3e-25
SPAC630.03 |arp3|act2|actin-like protein Arp3|Schizosaccharomyce... 88 1e-18
SPBC365.10 |||actin-like protein Arp5 |Schizosaccharomyces pombe... 62 5e-11
SPBP23A10.08 |alp5|arp4|actin-like protein Arp4|Schizosaccharomy... 59 6e-10
SPAC23D3.09 |arp42|arp4|SWI/SNF and RSC complex subunit Arp42|Sc... 52 5e-08
SPAC1071.06 |arp9||SWI/SNF and RSC complex subunit Arp9|Schizosa... 41 2e-04
SPAC56F8.02 |||AMP binding enzyme |Schizosaccharomyces pombe|chr... 31 0.14
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 30 0.25
SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1... 30 0.33
SPCC18.03 |||shuttle craft like transcriptional regulator|Schizo... 28 1.0
SPBC115.01c |rrp46||exosome subunit Rrp46 |Schizosaccharomyces p... 28 1.0
SPAC637.07 |moe1||translation initiation factor eIF3d Moe1|Schiz... 27 2.3
SPCC757.09c |rnc1||RNA-binding protein that suppresses calcineur... 27 2.3
SPBC21D10.12 |hob1||BAR adaptor protein Hob1|Schizosaccharomyces... 27 2.3
SPCC550.12 |arp6||actin-like protein Arp6|Schizosaccharomyces po... 27 3.1
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 27 3.1
SPAC20G8.05c |cdc15||cell division control protein Cdc15|Schizos... 27 3.1
SPBC216.07c |tor2|SPBC646.01c|phosphatidylinositol kinase Tor2|S... 26 5.4
SPAC1D4.14 |tho2|SPAC22F3.14c|THO complex subunit Tho2 |Schizosa... 25 7.2
SPAC821.09 |eng1||endo-1,3-beta-glucanase Eng1|Schizosaccharomyc... 25 9.5
SPBC4C3.12 |sep1||fork head transcription factor Sep1|Schizosacc... 25 9.5
SPAC1D4.11c |lkh1|kic1|dual specificity protein kinase Lkh1|Schi... 25 9.5
SPBC1683.09c |frp1||ferric-chelate reductase Frp1|Schizosaccharo... 25 9.5
>SPBC32H8.12c |act1|cps8|actin |Schizosaccharomyces pombe|chr
2|||Manual
Length = 375
Score = 217 bits (531), Expect = 9e-58
Identities = 95/101 (94%), Positives = 99/101 (98%)
Frame = +3
Query: 96 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 275
+EE+AALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRH G+MVGMGQKDSYVGDEAQSK
Sbjct: 2 EEEIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHHGIMVGMGQKDSYVGDEAQSK 61
Query: 276 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHP 398
RGILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHP
Sbjct: 62 RGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHP 102
Score = 156 bits (379), Expect = 2e-39
Identities = 74/84 (88%), Positives = 78/84 (92%)
Frame = +2
Query: 383 PRGTPRLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGD 562
P P LLTEAPLNPK+NREKMTQI+FETFN PA YVAIQAVLSLYASGRTTGIVLDSGD
Sbjct: 98 PEEHPCLLTEAPLNPKSNREKMTQIIFETFNAPAFYVAIQAVLSLYASGRTTGIVLDSGD 157
Query: 563 GVSHTVPIYEGYALPHAILRLDLA 634
GV+HTVPIYEGYALPHAI+RLDLA
Sbjct: 158 GVTHTVPIYEGYALPHAIMRLDLA 181
>SPBC1347.12 |||actin-like protein Arp1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 379
Score = 118 bits (284), Expect = 7e-28
Identities = 51/97 (52%), Positives = 70/97 (72%), Gaps = 1/97 (1%)
Frame = +3
Query: 114 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 293
+ +DNGSG KAGFAGDD P+ +FP+ VGR +H+ VM QKD +VG EAQ+ RG+L +
Sbjct: 12 ICIDNGSGFIKAGFAGDDIPKCLFPTCVGRIKHERVMPSSIQKDMFVGSEAQNLRGLLKI 71
Query: 294 KYPIEHGIVTNWDDMEKIWHHTFYN-ELRVAPEEHPV 401
+ PIE GI+ NW DME+IW + + + +L PEEHP+
Sbjct: 72 QRPIERGIIQNWSDMEEIWSYIYSDQQLNTLPEEHPL 108
Score = 94.7 bits (225), Expect = 1e-20
Identities = 42/78 (53%), Positives = 58/78 (74%)
Frame = +2
Query: 383 PRGTPRLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGD 562
P P LLTE PL N+EK+ + +ET N PA+ ++Q VL+LYAS RTTGIVL+ GD
Sbjct: 103 PEEHPLLLTEPPLANIRNKEKIAEYFYETLNVPALSFSLQPVLALYASARTTGIVLECGD 162
Query: 563 GVSHTVPIYEGYALPHAI 616
G++H+VPIY+G+++P AI
Sbjct: 163 GLTHSVPIYDGFSIPSAI 180
>SPAC11H11.06 |arp2|SPAC22F8.01|ARP2/3 actin-organizing complex
subunit Arp2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 390
Score = 109 bits (263), Expect = 3e-25
Identities = 51/84 (60%), Positives = 63/84 (75%)
Frame = +2
Query: 383 PRGTPRLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGD 562
PRG LLTE P+NP ANREKM + MFE + +YVAIQAVLSLYA G ++G+V+DSGD
Sbjct: 98 PRGRKILLTEPPMNPVANREKMCETMFERYGFGGVYVAIQAVLSLYAQGLSSGVVVDSGD 157
Query: 563 GVSHTVPIYEGYALPHAILRLDLA 634
GV+H VP+YE L H + RLD+A
Sbjct: 158 GVTHIVPVYESVVLNHLVGRLDVA 181
Score = 95.5 bits (227), Expect = 6e-21
Identities = 43/97 (44%), Positives = 68/97 (70%), Gaps = 2/97 (2%)
Frame = +3
Query: 102 EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP--RHQGVMVGMGQKDSYVGDEAQSK 275
E A +V+DNG+G K G+A D+ PR FPSIVGRP R + + KD VGDEA++
Sbjct: 2 ESAPIVLDNGTGFVKVGYAKDNFPRFQFPSIVGRPILRAEEKTGNVQIKDVMVGDEAEAV 61
Query: 276 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAP 386
R +L +KYP+E+GI+ ++++M ++W +TF+ +L++ P
Sbjct: 62 RSLLQVKYPMENGIIRDFEEMNQLWDYTFFEKLKIDP 98
>SPAC630.03 |arp3|act2|actin-like protein Arp3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 427
Score = 87.8 bits (208), Expect = 1e-18
Identities = 45/94 (47%), Positives = 59/94 (62%), Gaps = 8/94 (8%)
Frame = +2
Query: 377 CRPRGTPRLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRT------- 535
C P LLTE PLNP NRE +IMFE+FN +Y+A+QAVL+L AS +
Sbjct: 119 CEPEDHYFLLTEPPLNPPENRENTAEIMFESFNCAGLYIAVQAVLALAASWTSSKVTDRS 178
Query: 536 -TGIVLDSGDGVSHTVPIYEGYALPHAILRLDLA 634
TG V+DSGDGV+H +P+ EGY + +I + LA
Sbjct: 179 LTGTVVDSGDGVTHIIPVAEGYVIGSSIKTMPLA 212
Score = 68.5 bits (160), Expect = 8e-13
Identities = 40/118 (33%), Positives = 59/118 (50%), Gaps = 24/118 (20%)
Frame = +3
Query: 114 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVG---------MGQK-------- 242
+++DNG+G K G+AG+DAP VFP+++ R G G M K
Sbjct: 8 IIMDNGTGYSKLGYAGNDAPSYVFPTVIAT-RSAGASSGPAVSSKPSYMASKGSGHLSSK 66
Query: 243 ------DSYVGDEAQSKRGI-LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEH 395
D ++G++A K +L YPI HG + NWD ME+ W + + LR PE+H
Sbjct: 67 RATEDLDFFIGNDALKKASAGYSLDYPIRHGQIENWDHMERFWQQSLFKYLRCEPEDH 124
>SPBC365.10 |||actin-like protein Arp5 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 721
Score = 62.5 bits (145), Expect = 5e-11
Identities = 32/98 (32%), Positives = 58/98 (59%), Gaps = 1/98 (1%)
Frame = +3
Query: 114 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 293
LV+DNGS +AG+ G+ P+ VF ++V R R + + + + VG++ + G ++
Sbjct: 27 LVIDNGSWQLRAGWGGEKDPKLVFDNLVSRYRDR----KLSRTSTLVGNDTLIEVGSRSI 82
Query: 294 -KYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVC 404
+ P E +++NWD ME++ +TF +L + EHP+C
Sbjct: 83 ARSPFERNVISNWDLMEQVLDYTFL-KLGIDRMEHPIC 119
Score = 52.4 bits (120), Expect = 5e-08
Identities = 24/69 (34%), Positives = 40/69 (57%), Gaps = 2/69 (2%)
Frame = +2
Query: 395 PRLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGR--TTGIVLDSGDGV 568
P +TE NP R MT+++FE +N P++ I + S Y + + ++GIVL+ G+
Sbjct: 117 PICMTEPLANPTYVRSTMTELLFELYNAPSVAYGIDGLFSFYHNTKPSSSGIVLNLGNAA 176
Query: 569 SHTVPIYEG 595
SH +P+ G
Sbjct: 177 SHVIPVLNG 185
>SPBP23A10.08 |alp5|arp4|actin-like protein Arp4|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 433
Score = 58.8 bits (136), Expect = 6e-10
Identities = 33/101 (32%), Positives = 53/101 (52%)
Frame = +3
Query: 99 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 278
+EV+A+V+D GS + GF+G+D P+ V PS G + G + Y+ +S
Sbjct: 9 DEVSAIVIDPGSKWTRIGFSGEDIPKCVLPSYCGEFSDGRRLFG----EEYI---YKSNP 61
Query: 279 GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPV 401
G + +K I +G V NWD +W + +L+ P EHP+
Sbjct: 62 G-MEIKNAIRNGWVENWDVTVDLWRYGLEQQLKTNPLEHPI 101
Score = 55.2 bits (127), Expect = 8e-09
Identities = 34/88 (38%), Positives = 45/88 (51%), Gaps = 1/88 (1%)
Frame = +2
Query: 344 DLASY-LLQ*AACRPRGTPRLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLY 520
DL Y L Q P P L+TE NP NR K + MFE+ PA Y+A Q + +
Sbjct: 82 DLWRYGLEQQLKTNPLEHPILITEPFDNPPENRVKTLETMFESLRCPATYLAKQETCAAF 141
Query: 521 ASGRTTGIVLDSGDGVSHTVPIYEGYAL 604
ASG+ T ++D G S IY+G+ L
Sbjct: 142 ASGKGTACLVDIGAERSSVSAIYDGFVL 169
>SPAC23D3.09 |arp42|arp4|SWI/SNF and RSC complex subunit
Arp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 430
Score = 52.4 bits (120), Expect = 5e-08
Identities = 22/78 (28%), Positives = 44/78 (56%)
Frame = +2
Query: 401 LLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTV 580
++TE NP++ R+++ + FE + PA Y+ QAV +A+ ++T +++D G +
Sbjct: 105 MITEPSWNPQSVRQQIMEAAFEQLHVPAFYLTKQAVCVAFANSKSTALIVDIGSDNASVT 164
Query: 581 PIYEGYALPHAILRLDLA 634
P+ +G + I + LA
Sbjct: 165 PVVDGLIIRKGIFKQSLA 182
Score = 52.0 bits (119), Expect = 7e-08
Identities = 30/101 (29%), Positives = 52/101 (51%), Gaps = 2/101 (1%)
Frame = +3
Query: 99 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 278
EE+ +LV+D GS + G+AG+++P + PS + GV + ++ YV DE Q
Sbjct: 8 EEIPSLVIDPGSCWTRFGYAGEESPMTILPS------YYGVRSDVTGRNKYVVDELQIHA 61
Query: 279 GI--LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEH 395
I + +K +GI+ +W+ W +L+V P E+
Sbjct: 62 PIPGMEVKNGKSNGIIQDWESTLYTWERGLKEKLQVNPTEY 102
>SPAC1071.06 |arp9||SWI/SNF and RSC complex subunit
Arp9|Schizosaccharomyces pombe|chr 1|||Manual
Length = 523
Score = 40.7 bits (91), Expect = 2e-04
Identities = 22/66 (33%), Positives = 33/66 (50%)
Frame = +2
Query: 434 NREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHA 613
+RE TQ FE P +A + ++ LYA G G+V+D G + PI +G + A
Sbjct: 161 DRELATQFFFEECQVPGFTIAYEPLMGLYAIGILHGLVIDIGYEKTDITPILDGQIIFTA 220
Query: 614 ILRLDL 631
+L L
Sbjct: 221 TQQLPL 226
Score = 27.5 bits (58), Expect = 1.8
Identities = 13/39 (33%), Positives = 21/39 (53%), Gaps = 4/39 (10%)
Frame = +3
Query: 300 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEE----HPVC 404
PI+ G V +W+ ++ W H Y+ L P + +PVC
Sbjct: 113 PIQRGRVVDWEALKAFWKH-LYSLLLKDPNDTTFRYPVC 150
>SPAC56F8.02 |||AMP binding enzyme |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1517
Score = 31.1 bits (67), Expect = 0.14
Identities = 16/48 (33%), Positives = 26/48 (54%)
Frame = +3
Query: 159 GDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYP 302
G+ PRA F ++ P H G+++ M KD G+E S +G + + P
Sbjct: 502 GNQNPRATFVPLLCLPEHGGMVISM--KDWIGGEEFMSPKGFKSPRTP 547
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 30.3 bits (65), Expect = 0.25
Identities = 16/44 (36%), Positives = 19/44 (43%)
Frame = +3
Query: 483 PCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTP 614
P T+P P T PV P S P+ P P PS+ P P
Sbjct: 1037 PSTAPPVPIPTSTPPV-PKSSSGAPSAPPPVPAPSSEIPSIPAP 1079
Score = 25.8 bits (54), Expect = 5.4
Identities = 15/45 (33%), Positives = 18/45 (40%)
Frame = +3
Query: 480 PPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTP 614
PP T+P P P VP + P P P PS+ TP
Sbjct: 1212 PPSTAPPVPTPSAGLPPVPVPTAKAP----PVPAPSSEAPSVSTP 1252
Score = 25.4 bits (53), Expect = 7.2
Identities = 16/50 (32%), Positives = 20/50 (40%), Gaps = 5/50 (10%)
Frame = +3
Query: 480 PPCTSPSKPCSRCTRPVVPPVSCWTP-----ATVSPTPCPSTRDTHSPTP 614
PP +P P P VPP S P A + P P P+ + P P
Sbjct: 1193 PPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLPPVPVPTAKAPPVPAP 1242
Score = 25.0 bits (52), Expect = 9.5
Identities = 16/47 (34%), Positives = 18/47 (38%), Gaps = 2/47 (4%)
Frame = +3
Query: 480 PPCTSPSKPCSRCTRP--VVPPVSCWTPATVSPTPCPSTRDTHSPTP 614
PP PS +P VPPV P+ P P PS P P
Sbjct: 1092 PPVPKPSVAAPPVPKPSVAVPPVPA--PSGAPPVPKPSVAAPPVPVP 1136
>SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 800
Score = 29.9 bits (64), Expect = 0.33
Identities = 19/55 (34%), Positives = 23/55 (41%), Gaps = 1/55 (1%)
Frame = -2
Query: 256 PT*ESFCPI-PTITP*WRGLPTIEGNTARGASSPAKPALHIPEPLSTTNAATSSS 95
PT S P+ PT+ P P N S P PL+TTN TS+S
Sbjct: 401 PTGNSTTPVTPTVPPTSSSTPLTTTNCTTSTSVPYTSTPVTSTPLATTNCTTSTS 455
Score = 29.1 bits (62), Expect = 0.58
Identities = 19/53 (35%), Positives = 23/53 (43%), Gaps = 1/53 (1%)
Frame = +3
Query: 459 CSKHSTRPPCTSPSKPCSRCTRPVVPPVS-CWTPATVSPTPCPSTRDTHSPTP 614
C+ ++ PP T S S P VPP S T + PT ST SP P
Sbjct: 172 CTTSTSIPP-TGGSSSLSTPITPTVPPTSTSSTSIPIPPTSTSSTDTNSSPLP 223
Score = 27.9 bits (59), Expect = 1.3
Identities = 18/53 (33%), Positives = 23/53 (43%), Gaps = 1/53 (1%)
Frame = +3
Query: 459 CSKHSTRPPCTSPSKPCSRCTRPVVPPVS-CWTPATVSPTPCPSTRDTHSPTP 614
C+ ++ PP T S S P VPP S T + PT ST +P P
Sbjct: 115 CTTSTSIPP-TGGSSSLSTPITPTVPPTSTSSTSIPIPPTSTSSTDTNSNPLP 166
Score = 25.4 bits (53), Expect = 7.2
Identities = 19/49 (38%), Positives = 20/49 (40%), Gaps = 1/49 (2%)
Frame = +3
Query: 471 STRPPCTSPSKPCSRCTRPVVPPVS-CWTPATVSPTPCPSTRDTHSPTP 614
ST P T S S P VPP S T + PT ST SP P
Sbjct: 232 STSIP-TGGSSSLSTPITPTVPPTSTSSTSIPIPPTSTSSTDTNSSPLP 279
>SPCC18.03 |||shuttle craft like transcriptional
regulator|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1077
Score = 28.3 bits (60), Expect = 1.0
Identities = 12/35 (34%), Positives = 16/35 (45%)
Frame = +3
Query: 504 PCSRCTRPVVPPVSCWTPATVSPTPCPSTRDTHSP 608
PC+ + PPV+C TP P C + H P
Sbjct: 621 PCTCGRTRLYPPVACGTPIPDCPYLCVLPKSCHHP 655
>SPBC115.01c |rrp46||exosome subunit Rrp46 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 226
Score = 28.3 bits (60), Expect = 1.0
Identities = 11/26 (42%), Positives = 19/26 (73%)
Frame = +2
Query: 398 RLLTEAPLNPKANREKMTQIMFETFN 475
R+L APL+ + +KM +++FET+N
Sbjct: 180 RVLETAPLHAEEVSKKMKELLFETYN 205
>SPAC637.07 |moe1||translation initiation factor eIF3d
Moe1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 567
Score = 27.1 bits (57), Expect = 2.3
Identities = 17/43 (39%), Positives = 18/43 (41%)
Frame = -2
Query: 649 VRSRPGQVQTQNGVGECVSLVDGHGVGDTVAGVQHDTGGTTGR 521
VR R VQ + G G G G GDTV GG GR
Sbjct: 118 VRGRGQNVQ-RGGRGGRYGSSGGRGAGDTVVSRSSGAGGARGR 159
>SPCC757.09c |rnc1||RNA-binding protein that suppresses calcineurin
deletion Rnc1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 398
Score = 27.1 bits (57), Expect = 2.3
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = +3
Query: 504 PCSRCTRPVVPPVSCWTPATVSPTPCPST 590
P SR T+P+ S +P VSP PST
Sbjct: 262 PVSRLTQPLPSLASTASPQQVSPPAAPST 290
>SPBC21D10.12 |hob1||BAR adaptor protein Hob1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 466
Score = 27.1 bits (57), Expect = 2.3
Identities = 12/36 (33%), Positives = 15/36 (41%)
Frame = +3
Query: 480 PPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPS 587
PP P + T PV PV+ A P P P+
Sbjct: 367 PPPVMPQPAAAAVTTPVAAPVAAAAAAVPVPPPAPA 402
>SPCC550.12 |arp6||actin-like protein Arp6|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 401
Score = 26.6 bits (56), Expect = 3.1
Identities = 21/81 (25%), Positives = 37/81 (45%), Gaps = 2/81 (2%)
Frame = +3
Query: 114 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 293
+V+DNG+ KAGFAG P+ + R + G + ++G+E + TL
Sbjct: 8 IVLDNGAYHIKAGFAGGKV--VEIPNCLTRSKD-------GNR-LFLGNELANCNDFTTL 57
Query: 294 KYPIEH--GIVTNWDDMEKIW 350
++ H G + +W +W
Sbjct: 58 QFRRAHEKGYLVHWSTETAVW 78
Score = 25.0 bits (52), Expect = 9.5
Identities = 9/30 (30%), Positives = 18/30 (60%)
Frame = +2
Query: 542 IVLDSGDGVSHTVPIYEGYALPHAILRLDL 631
+V+DSG +H +P+ + A+ R+D+
Sbjct: 159 LVIDSGYSFTHIIPVIDFSVQEQAVKRVDV 188
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 26.6 bits (56), Expect = 3.1
Identities = 17/41 (41%), Positives = 21/41 (51%), Gaps = 2/41 (4%)
Frame = -2
Query: 259 SPT*ESFC--PIPTITP*WRGLPTIEGNTARGASSPAKPAL 143
S T +SF P+PT P LPT NT + P+ PAL
Sbjct: 64 SNTPKSFAAPPVPTGAP---SLPTSSNNTQQAEERPSMPAL 101
>SPAC20G8.05c |cdc15||cell division control protein
Cdc15|Schizosaccharomyces pombe|chr 1|||Manual
Length = 927
Score = 26.6 bits (56), Expect = 3.1
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = -3
Query: 267 VPHLLHKSPSVPYRPSRPDGGAFPRSRET 181
+ L+ K+PS PY SRP A S T
Sbjct: 306 IDQLISKAPSYPYSSSRPSASASLASSPT 334
>SPBC216.07c |tor2|SPBC646.01c|phosphatidylinositol kinase
Tor2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 2337
Score = 25.8 bits (54), Expect = 5.4
Identities = 10/27 (37%), Positives = 17/27 (62%)
Frame = -1
Query: 296 FEGQDTSFALCLISYIRVLLSHTDHHA 216
+EG+DT+ +Y+R++L TD A
Sbjct: 74 YEGEDTTRITRFANYLRIILPGTDQKA 100
>SPAC1D4.14 |tho2|SPAC22F3.14c|THO complex subunit Tho2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1628
Score = 25.4 bits (53), Expect = 7.2
Identities = 15/50 (30%), Positives = 27/50 (54%)
Frame = +1
Query: 415 SPQPQGQQREDDPDHVRNIQHARHVRRHPSRALAVRVRSYHRYRAGLRRR 564
+PQ + E++ D++R++ +RH RR P +A + R H + R R
Sbjct: 1428 TPQSRSFTNENN-DNLRSV--SRHTRREPQQAQNLNARREHESQKSDRWR 1474
>SPAC821.09 |eng1||endo-1,3-beta-glucanase Eng1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1016
Score = 25.0 bits (52), Expect = 9.5
Identities = 15/43 (34%), Positives = 22/43 (51%)
Frame = +3
Query: 486 CTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTP 614
C +PS+ C + PV + T S TP P+T + +PTP
Sbjct: 825 CYNPSQ--YGCDNGALGPVQS-SSTTSSITPTPTTTSSITPTP 864
>SPBC4C3.12 |sep1||fork head transcription factor
Sep1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 663
Score = 25.0 bits (52), Expect = 9.5
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +3
Query: 501 KPCSRCTRPVVPPVSCWTPATVSPTPCP 584
KP S+ TRP +P + T +V P P P
Sbjct: 65 KPSSKATRPYIPSYTRLT-YSVPPLPIP 91
>SPAC1D4.11c |lkh1|kic1|dual specificity protein kinase
Lkh1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 690
Score = 25.0 bits (52), Expect = 9.5
Identities = 13/49 (26%), Positives = 23/49 (46%)
Frame = +3
Query: 462 SKHSTRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTRDTHSP 608
S+H + +PS + P+ P ++ W P T PT P + + + P
Sbjct: 244 SQHKSVNYSVTPSSINNHTAVPLSPTLAVWLPMT-QPTFQPPSANVYQP 291
>SPBC1683.09c |frp1||ferric-chelate reductase
Frp1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 564
Score = 25.0 bits (52), Expect = 9.5
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = +3
Query: 219 VMVGMGQKDSYVGDEAQSKRGILTLKYPI 305
+M+G +Y+G AQ KR +LT + I
Sbjct: 165 IMIGAIHGFAYIGLAAQGKRALLTARVTI 193
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,938,539
Number of Sequences: 5004
Number of extensions: 66042
Number of successful extensions: 262
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 213
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 254
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 293780908
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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