Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--2021
         (811 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    25   0.71 
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    24   1.2  
EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate 1-deca...    22   5.0  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    21   8.8  

>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 25.0 bits (52), Expect = 0.71
 Identities = 13/46 (28%), Positives = 22/46 (47%)
 Frame = +1

Query: 559 ESNLQEVVFDHLHATAFQGTPLGQTILGPTKNIKKISKADLQSYIR 696
           E N+ + V  H +  +  G        GP   ++  S+ DLQ+Y+R
Sbjct: 500 EINIMKSVRQHPYIVSLIGCVTEGRAEGPLLVVEYCSRGDLQTYLR 545


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 24.2 bits (50), Expect = 1.2
 Identities = 11/27 (40%), Positives = 15/27 (55%)
 Frame = -3

Query: 395  FKCAPMFSTSSSKSVCDLLLVPLKAMC 315
            F CAP     ++K++CD    P KA C
Sbjct: 1305 FNCAPGLHWDNNKNICDW---PEKATC 1328



 Score = 22.6 bits (46), Expect = 3.8
 Identities = 7/9 (77%), Positives = 8/9 (88%)
 Frame = -3

Query: 632  VCPNGVPWN 606
            VCPNG+ WN
Sbjct: 2264 VCPNGLFWN 2272



 Score = 21.8 bits (44), Expect = 6.6
 Identities = 9/18 (50%), Positives = 10/18 (55%)
 Frame = -3

Query: 770  ARSTTFSCLTPPAPDKPI 717
            A ST     TP  PDKP+
Sbjct: 2288 ASSTMAPSTTPMVPDKPV 2305


>EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate
           1-decarboxylase protein.
          Length = 540

 Score = 22.2 bits (45), Expect = 5.0
 Identities = 7/12 (58%), Positives = 11/12 (91%)
 Frame = -1

Query: 271 GSQRRSRVLQWQ 236
           G+ R++RVLQW+
Sbjct: 81  GTNRKNRVLQWR 92


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
            adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 21.4 bits (43), Expect = 8.8
 Identities = 12/30 (40%), Positives = 16/30 (53%)
 Frame = +2

Query: 251  SGSTLAPAMKPPRTMVSLISLNTWLLKVPV 340
            +G T+APA + P+     I L    L VPV
Sbjct: 1585 TGGTIAPAREIPKEDTFQIILANLNLVVPV 1614


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 203,258
Number of Sequences: 336
Number of extensions: 4636
Number of successful extensions: 11
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 22102797
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)