Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--2021
         (811 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.            27   0.52 
DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            25   2.1  
EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calc...    25   2.8  
AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative FGF-sign...    24   6.4  

>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
          Length = 3361

 Score = 27.5 bits (58), Expect = 0.52
 Identities = 17/51 (33%), Positives = 25/51 (49%)
 Frame = -2

Query: 594  KVIKHNLLKVTFDILHFAKNDTAFSFDFGFGEGGILYDISKDLYCYGNVIS 442
            KV   N L  ++ I +  +ND   S  + FG GG  + +  D    G+VIS
Sbjct: 2046 KVYVINTLNTSYSIDYEYENDNLRSIKYPFGAGGEPFRLIYDWNGNGDVIS 2096


>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 25.4 bits (53), Expect = 2.1
 Identities = 11/42 (26%), Positives = 22/42 (52%)
 Frame = +1

Query: 481 IIQNSSLAEPEIERERGVILREMQDVESNLQEVVFDHLHATA 606
           +++  +  E ++ERER  ++   + +    + VV  HLH  A
Sbjct: 810 VVEGGTKDETDMERERKEMVERSRPLRKRKRLVVQQHLHELA 851


>EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calcium
            channel alpha1 subunit protein.
          Length = 1893

 Score = 25.0 bits (52), Expect = 2.8
 Identities = 19/82 (23%), Positives = 32/82 (39%)
 Frame = +2

Query: 335  PVKDHRRT*NYW*KTWVHT*TPTPPGNKQFFTQNASLMTFP*Q*RSLLISYRIPPSPNPK 514
            P   HRR    +   W     P P G+KQ +  N + M+      S  + + +   PN  
Sbjct: 1633 PEPSHRRNHTLFGNVWSSIRRPGPFGSKQKWNSNNNKMSATSMAASAAM-HTVLSGPNDG 1691

Query: 515  SNENAVSFFAKCKMSKVTFRRL 580
            S++  +     C  S  T+  +
Sbjct: 1692 SSQTEMKPKQNCVNSSNTYNHV 1713


>AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative FGF-signaling
            promoter protein.
          Length = 1197

 Score = 23.8 bits (49), Expect = 6.4
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = +2

Query: 482  SYRIPPSPNPKSNE 523
            +Y +PPSP P S E
Sbjct: 1051 NYMVPPSPRPVSEE 1064


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 901,334
Number of Sequences: 2352
Number of extensions: 20819
Number of successful extensions: 128
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 128
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 128
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 85655418
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)