Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--2018
         (443 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI0001555513 Cluster: PREDICTED: hypothetical protein,...    34   1.2  
UniRef50_A7IFT3 Cluster: Anti-ECFsigma factor, ChrR; n=1; Xantho...    34   1.2  
UniRef50_A3HV82 Cluster: Mannosyl transferase; n=1; Algoriphagus...    31   8.5  

>UniRef50_UPI0001555513 Cluster: PREDICTED: hypothetical protein,
           partial; n=1; Ornithorhynchus anatinus|Rep: PREDICTED:
           hypothetical protein, partial - Ornithorhynchus anatinus
          Length = 502

 Score = 34.3 bits (75), Expect = 1.2
 Identities = 19/39 (48%), Positives = 26/39 (66%), Gaps = 1/39 (2%)
 Frame = -2

Query: 385 AVWDRL*VRLSHSRQL-ESIDLSSKTWVSNPVARVLQES 272
           A+W+ + V L  S+ L ESI +S   WVS PV+R L+ES
Sbjct: 43  ALWESILVSLPRSQALWESILVSQALWVSIPVSRPLRES 81


>UniRef50_A7IFT3 Cluster: Anti-ECFsigma factor, ChrR; n=1;
           Xanthobacter autotrophicus Py2|Rep: Anti-ECFsigma
           factor, ChrR - Xanthobacter sp. (strain Py2)
          Length = 235

 Score = 34.3 bits (75), Expect = 1.2
 Identities = 15/26 (57%), Positives = 20/26 (76%)
 Frame = +1

Query: 223 RDHLICRYTGPSAGPCMTPEGLVLPD 300
           RDHL   ++GP+A P + PEGLVLP+
Sbjct: 89  RDHLEAAFSGPAAAPRL-PEGLVLPE 113


>UniRef50_A3HV82 Cluster: Mannosyl transferase; n=1; Algoriphagus
           sp. PR1|Rep: Mannosyl transferase - Algoriphagus sp. PR1
          Length = 376

 Score = 31.5 bits (68), Expect = 8.5
 Identities = 12/32 (37%), Positives = 19/32 (59%)
 Frame = -1

Query: 155 CKNTHLLFSLYFLQH*LNRPRMYRRYFINFVR 60
           C+   +L   +F Q   N PR +R+YF+N +R
Sbjct: 103 CRRMTVLHDAFFWQMPQNYPRWWRKYFLNLIR 134


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 456,756,641
Number of Sequences: 1657284
Number of extensions: 8826980
Number of successful extensions: 22644
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 21878
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22639
length of database: 575,637,011
effective HSP length: 93
effective length of database: 421,509,599
effective search space used: 22761518346
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)