Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--2018
         (443 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF395080-1|AAK97462.1|  537|Anopheles gambiae zinc finger transc...    26   0.69 
M93689-1|AAA29368.1|  442|Anopheles gambiae protein ( Anopheles ...    24   2.1  
EF014219-1|ABJ91581.1|  647|Anopheles gambiae cation proton anti...    24   2.1  
AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            23   4.9  

>AF395080-1|AAK97462.1|  537|Anopheles gambiae zinc finger
           transcription factor pannier protein.
          Length = 537

 Score = 25.8 bits (54), Expect = 0.69
 Identities = 10/18 (55%), Positives = 13/18 (72%)
 Frame = -2

Query: 220 TQNSHTNLNGDGNRH*AG 167
           TQ+SH+ +NG GN H  G
Sbjct: 369 TQHSHSPVNGYGNNHPTG 386


>M93689-1|AAA29368.1|  442|Anopheles gambiae protein ( Anopheles
           gambiae T1 retroposon. ).
          Length = 442

 Score = 24.2 bits (50), Expect = 2.1
 Identities = 10/28 (35%), Positives = 15/28 (53%)
 Frame = +3

Query: 339 SCLEWLRRTQRRSQTAPGPCPPRRKTSA 422
           SC  +  RT+  S  + GPC    K+S+
Sbjct: 210 SCNHYTHRTKVTSDISAGPCRTNTKSSS 237


>EF014219-1|ABJ91581.1|  647|Anopheles gambiae cation proton
           antiporter protein.
          Length = 647

 Score = 24.2 bits (50), Expect = 2.1
 Identities = 10/22 (45%), Positives = 14/22 (63%)
 Frame = -2

Query: 442 VGRTLLQALVFLLGGQGPGAVW 377
           +G  + QA V ++GG G G VW
Sbjct: 357 LGLQIAQAPVCIIGGLGFGVVW 378


>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 23.0 bits (47), Expect = 4.9
 Identities = 13/39 (33%), Positives = 15/39 (38%)
 Frame = -2

Query: 178  H*AGNIIFVKTRTYCSLYIFYSTSLTDPACTGVISSISF 62
            H   NII +    Y S Y      L   AC G  SS  +
Sbjct: 3102 HNTSNIIGITEDHYSSCYPIEYNGLLTTACAGTNSSYMY 3140


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 491,302
Number of Sequences: 2352
Number of extensions: 9740
Number of successful extensions: 18
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 37418568
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)