Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--2017
(710 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF237761-2|AAF81411.1| 908|Drosophila melanogaster unknown prot... 134 1e-31
AY180919-1|AAN87272.1| 884|Drosophila melanogaster ORF1 protein. 125 7e-29
AF456125-1|AAL57609.1| 832|Drosophila melanogaster reverse tran... 125 7e-29
M17214-2|AAA28508.1| 858|Drosophila melanogaster protein ( D.me... 113 2e-25
X17551-2|CAA35587.1| 888|Drosophila melanogaster protein ( D.me... 109 5e-24
AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p pro... 109 5e-24
AY060438-1|AAL25477.1| 906|Drosophila melanogaster LD46618p pro... 102 4e-22
M22874-2|AAA28675.1| 916|Drosophila melanogaster protein ( D.me... 97 2e-20
AY089343-1|AAL90081.2| 718|Drosophila melanogaster AT16518p pro... 97 2e-20
AM040243-1|CAJ13339.1| 656|Drosophila melanogaster pol protein ... 74 2e-13
AM040242-2|CAJ13338.1| 1103|Drosophila melanogaster pol protein ... 74 2e-13
AJ542582-2|CAD65871.1| 1103|Drosophila melanogaster pol protein ... 74 2e-13
AJ542581-2|CAD65869.1| 1103|Drosophila melanogaster pol protein ... 74 2e-13
AY600955-2|AAT12845.1| 1092|Drosophila melanogaster pol protein ... 66 4e-11
U14101-2|AAC46494.1| 1084|Drosophila melanogaster putative rever... 62 1e-09
U02279-1|AAA18301.1| 964|Drosophila melanogaster protein ( Dros... 59 7e-09
AY561850-2|AAS68534.1| 1080|Drosophila melanogaster pol protein ... 59 7e-09
AY035777-2|AAK77971.1| 1080|Drosophila melanogaster pol protein ... 59 7e-09
AM040245-1|CAJ13341.1| 1042|Drosophila melanogaster pol protein ... 59 7e-09
AJ566116-2|CAD92793.1| 1080|Drosophila melanogaster pol protein ... 59 7e-09
U14102-1|AAC46495.1| 299|Drosophila melanogaster putative rever... 46 7e-05
X51968-2|CAA36227.1| 1021|Drosophila melanogaster protein ( Dros... 45 9e-05
M14954-2|AAA70222.2| 1219|Drosophila melanogaster putative ORF2 ... 31 1.5
AJ278684-2|CAB99192.1| 989|Drosophila melanogaster endonuclease... 29 6.2
>AF237761-2|AAF81411.1| 908|Drosophila melanogaster unknown protein.
Length = 908
Score = 134 bits (323), Expect = 1e-31
Identities = 72/204 (35%), Positives = 103/204 (50%)
Frame = +3
Query: 84 PDIPRSPPTHLALFADDTTVYYSSRNKSLIAKKLQSAALALGQWFRKWRIDINPAKSTAV 263
PD+ + LA FADD V Y SR + A +Q A +W R+W I IN +KS V
Sbjct: 661 PDVSLYGKSMLATFADDVCVTYRSRCEHDAADGIQDFAYRFSEWARRWNIGINSSKSNNV 720
Query: 264 LFQXXXXXXXXXXXXXXNLTPPITLFRQPIPWARKVKYLGVTLDASMTFRPHIKSVRDRA 443
F PP+ + P+P KYLGV LD +TF H+ +R R
Sbjct: 721 CFTLKR-----------RTPPPVYIEEVPVPQPNAAKYLGVLLDRRLTFSKHVTDIRTRL 769
Query: 444 AFILGRLYPMICKRSKMSLRNKVTLYKTCIRPVMTYASVVFAHAARTHIDTLQSLQSRFC 623
+ + Y ++ RSK+SL NK+T+YK + P Y ++ A +HI +Q++Q++
Sbjct: 770 RAKVAKHYWLLSSRSKLSLSNKLTIYKQILAPNWKYGCQIWGLACDSHIKRIQAIQNKVA 829
Query: 624 RLAVGASWFVRNVDLHDDLGLESI 695
RL G WFVRN LH DL L ++
Sbjct: 830 RLITGCEWFVRNTTLHRDLKLATV 853
>AY180919-1|AAN87272.1| 884|Drosophila melanogaster ORF1 protein.
Length = 884
Score = 125 bits (301), Expect = 7e-29
Identities = 63/205 (30%), Positives = 109/205 (53%)
Frame = +3
Query: 87 DIPRSPPTHLALFADDTTVYYSSRNKSLIAKKLQSAALALGQWFRKWRIDINPAKSTAVL 266
DIP++ L+LFADD VY + + S I + +QS L +++KW+I INP K+ A+
Sbjct: 683 DIPQATNCVLSLFADDAAVYSAGFSYSEINQSMQSYLNELDIYYKKWKIKINPNKTNAIF 742
Query: 267 FQXXXXXXXXXXXXXXNLTPPITLFRQPIPWARKVKYLGVTLDASMTFRPHIKSVRDRAA 446
F + + PI W ++YLG+ D +TF+ HI + +
Sbjct: 743 FTKRRKPRYLPDRQ-------LRILDSPIQWVDNIRYLGIIFDKKLTFKYHINNTIMKVN 795
Query: 447 FILGRLYPMICKRSKMSLRNKVTLYKTCIRPVMTYASVVFAHAARTHIDTLQSLQSRFCR 626
I+ LYP+I ++SK+S+ NK+ ++KT P++ Y S V+ A+THI LQ Q++ +
Sbjct: 796 KIICTLYPLINRKSKLSISNKIIIFKTIFNPILMYGSPVWGRCAQTHIKKLQICQNKLLK 855
Query: 627 LAVGASWFVRNVDLHDDLGLESIRK 701
L + ++ LH G++ +++
Sbjct: 856 LIMNLPYYTNTKYLHIKAGVQKVQQ 880
>AF456125-1|AAL57609.1| 832|Drosophila melanogaster reverse
transcriptase protein.
Length = 832
Score = 125 bits (301), Expect = 7e-29
Identities = 63/205 (30%), Positives = 109/205 (53%)
Frame = +3
Query: 87 DIPRSPPTHLALFADDTTVYYSSRNKSLIAKKLQSAALALGQWFRKWRIDINPAKSTAVL 266
DIP++ L+LFADD VY + + S I + +QS L +++KW+I INP K+ A+
Sbjct: 631 DIPQATNCVLSLFADDAAVYSAGFSYSEINQSMQSYLNELDIYYKKWKIKINPNKTNAIF 690
Query: 267 FQXXXXXXXXXXXXXXNLTPPITLFRQPIPWARKVKYLGVTLDASMTFRPHIKSVRDRAA 446
F + + PI W ++YLG+ D +TF+ HI + +
Sbjct: 691 FTKRRKPRYLPDRQ-------LRILDSPIQWVDNIRYLGIIFDKKLTFKYHINNTIMKVN 743
Query: 447 FILGRLYPMICKRSKMSLRNKVTLYKTCIRPVMTYASVVFAHAARTHIDTLQSLQSRFCR 626
I+ LYP+I ++SK+S+ NK+ ++KT P++ Y S V+ A+THI LQ Q++ +
Sbjct: 744 KIICTLYPLINRKSKLSISNKIIIFKTIFNPILMYGSPVWGRCAQTHIKKLQICQNKLLK 803
Query: 627 LAVGASWFVRNVDLHDDLGLESIRK 701
L + ++ LH G++ +++
Sbjct: 804 LIMNLPYYTNTKYLHIKAGVQKVQQ 828
>M17214-2|AAA28508.1| 858|Drosophila melanogaster protein (
D.melanogaster Fw repetitiveelement putative reverse
transcriptase, complete cds,and putative binding protein,
3' end. ).
Length = 858
Score = 113 bits (273), Expect = 2e-25
Identities = 64/203 (31%), Positives = 105/203 (51%)
Frame = +3
Query: 87 DIPRSPPTHLALFADDTTVYYSSRNKSLIAKKLQSAALALGQWFRKWRIDINPAKSTAVL 266
DIP + ++ FADDT + SR+ +L + + +W WRI +N K V
Sbjct: 655 DIPTNSRLTVSTFADDTAILSRSRSPIQATAQLALYLIDIKKWLSDWRIKVNEQKCKHVT 714
Query: 267 FQXXXXXXXXXXXXXXNLTPPITLFRQPIPWARKVKYLGVTLDASMTFRPHIKSVRDRAA 446
F PP+ L P+P A +V YLGV LD +T+R HI++ + +
Sbjct: 715 FTLNRQDC-----------PPLLLNSIPLPKADEVTYLGVHLDRRLTWRRHIEAKKTQLK 763
Query: 447 FILGRLYPMICKRSKMSLRNKVTLYKTCIRPVMTYASVVFAHAARTHIDTLQSLQSRFCR 626
L+ +I S +SL +KV LY + ++P+ TY S ++ +A+ ++ID +Q QS+ R
Sbjct: 764 LKANNLHWLINSGSPLSLDHKVLLYNSILKPIWTYGSQLWGNASNSNIDIIQRAQSKILR 823
Query: 627 LAVGASWFVRNVDLHDDLGLESI 695
GA W+VR+ ++ DL + S+
Sbjct: 824 TITGAPWYVRSENIQRDLNIPSV 846
>X17551-2|CAA35587.1| 888|Drosophila melanogaster protein (
D.melanogaster white-one mutant DNA with Doc retroposon,
inserted inwhite locuspromoter region. ).
Length = 888
Score = 109 bits (261), Expect = 5e-24
Identities = 65/203 (32%), Positives = 99/203 (48%)
Frame = +3
Query: 87 DIPRSPPTHLALFADDTTVYYSSRNKSLIAKKLQSAALALGQWFRKWRIDINPAKSTAVL 266
D P + FADDT + S+ L ++ +W WRI IN K V
Sbjct: 653 DFPIDYNLTTSTFADDTAILSRSKCPIKATALLSRHLTSVERWLADWRISINVQKCKQVT 712
Query: 267 FQXXXXXXXXXXXXXXNLTPPITLFRQPIPWARKVKYLGVTLDASMTFRPHIKSVRDRAA 446
F PP+ L IP A +V YLGV LD +T+R HI++
Sbjct: 713 FTLNK-----------QTCPPLVLNNICIPQADEVTYLGVHLDRRLTWRKHIEAKSKHLK 761
Query: 447 FILGRLYPMICKRSKMSLRNKVTLYKTCIRPVMTYASVVFAHAARTHIDTLQSLQSRFCR 626
L+ +I RS +SL K LY + ++P+ TY S ++ +A+R++ID +Q QSR R
Sbjct: 762 LKARNLHWLINARSPLSLEFKALLYNSVLKPIWTYGSELWGNASRSNIDIIQRAQSRILR 821
Query: 627 LAVGASWFVRNVDLHDDLGLESI 695
+ GA W++RN ++H DL ++ +
Sbjct: 822 IITGAPWYLRNENIHRDLKIKLV 844
>AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p protein.
Length = 888
Score = 109 bits (261), Expect = 5e-24
Identities = 65/203 (32%), Positives = 99/203 (48%)
Frame = +3
Query: 87 DIPRSPPTHLALFADDTTVYYSSRNKSLIAKKLQSAALALGQWFRKWRIDINPAKSTAVL 266
D P + FADDT + S+ L ++ +W WRI IN K V
Sbjct: 653 DFPIDYNLTTSTFADDTAILSRSKCPIKATALLSRHLTSVERWLADWRISINVQKCKQVT 712
Query: 267 FQXXXXXXXXXXXXXXNLTPPITLFRQPIPWARKVKYLGVTLDASMTFRPHIKSVRDRAA 446
F PP+ L IP A +V YLGV LD +T+R HI++
Sbjct: 713 FTLNK-----------QTCPPLVLNNICIPQADEVTYLGVHLDRRLTWRKHIEAKSKHLK 761
Query: 447 FILGRLYPMICKRSKMSLRNKVTLYKTCIRPVMTYASVVFAHAARTHIDTLQSLQSRFCR 626
L+ +I RS +SL K LY + ++P+ TY S ++ +A+R++ID +Q QSR R
Sbjct: 762 LKARNLHWLINARSPLSLEFKALLYNSVLKPIWTYGSELWGNASRSNIDIIQRAQSRILR 821
Query: 627 LAVGASWFVRNVDLHDDLGLESI 695
+ GA W++RN ++H DL ++ +
Sbjct: 822 IITGAPWYLRNENIHRDLKIKLV 844
>AY060438-1|AAL25477.1| 906|Drosophila melanogaster LD46618p protein.
Length = 906
Score = 102 bits (245), Expect = 4e-22
Identities = 59/196 (30%), Positives = 98/196 (50%)
Frame = +3
Query: 114 LALFADDTTVYYSSRNKSLIAKKLQSAALALGQWFRKWRIDINPAKSTAVLFQXXXXXXX 293
LA +ADD + YSS + A+ LQ L W ++W + +NP K+ F
Sbjct: 675 LATYADDIALLYSSNCCNEAARGLQEYLTTLAAWCKRWILKVNPQKTINPCFTLKTLSP- 733
Query: 294 XXXXXXXNLTPPITLFRQPIPWARKVKYLGVTLDASMTFRPHIKSVRDRAAFILGRLYPM 473
+T PI L + + KYLG+TLD +TF PH+K+ R + +L +
Sbjct: 734 --------VTAPIELEGVILDQPSQAKYLGITLDKRLTFGPHLKATTRRCYQRMQQLRWL 785
Query: 474 ICKRSKMSLRNKVTLYKTCIRPVMTYASVVFAHAARTHIDTLQSLQSRFCRLAVGASWFV 653
+ ++S M+LR K +Y C+ P+ Y ++ AA+++ + +Q LQ+R R ++V
Sbjct: 786 LNRKSTMTLRAKRAVYVHCVAPIWLYGIQIWGIAAKSNYNRIQVLQNRAMRAITDCPYYV 845
Query: 654 RNVDLHDDLGLESIRK 701
R LH DL L ++ +
Sbjct: 846 RGTTLHRDLNLHTVEE 861
>M22874-2|AAA28675.1| 916|Drosophila melanogaster protein (
D.melanogaster LINEelement J-1, clone J-1. ).
Length = 916
Score = 97.1 bits (231), Expect = 2e-20
Identities = 58/189 (30%), Positives = 93/189 (49%)
Frame = +3
Query: 114 LALFADDTTVYYSSRNKSLIAKKLQSAALALGQWFRKWRIDINPAKSTAVLFQXXXXXXX 293
+A +ADDT V S++ LQ A QW W + IN K V F
Sbjct: 676 IATYADDTAVLTKSKSILAATSGLQEYLDAFQQWAENWNVRINAEKCANVTFANRTGSC- 734
Query: 294 XXXXXXXNLTPPITLFRQPIPWARKVKYLGVTLDASMTFRPHIKSVRDRAAFILGRLYPM 473
P ++L + I + KYLG+TLD +TF HI +++ + R+ +
Sbjct: 735 ----------PGVSLNGRLIRHHQAYKYLGITLDRKLTFSRHITNIQQAFRTKVARMSWL 784
Query: 474 ICKRSKMSLRNKVTLYKTCIRPVMTYASVVFAHAARTHIDTLQSLQSRFCRLAVGASWFV 653
I R+K+SL KV +YK+ + P + Y V+ AA++H++ ++ LQ++ R GA W++
Sbjct: 785 IAPRNKLSLGCKVNIYKSILAPCLFYGLQVYGIAAKSHLNKIRILQAKTLRRISGAPWYM 844
Query: 654 RNVDLHDDL 680
R D+ DL
Sbjct: 845 RTRDIERDL 853
>AY089343-1|AAL90081.2| 718|Drosophila melanogaster AT16518p protein.
Length = 718
Score = 97.1 bits (231), Expect = 2e-20
Identities = 58/189 (30%), Positives = 93/189 (49%)
Frame = +3
Query: 114 LALFADDTTVYYSSRNKSLIAKKLQSAALALGQWFRKWRIDINPAKSTAVLFQXXXXXXX 293
+A +ADDT V S++ LQ A QW W + IN K V F
Sbjct: 478 IATYADDTAVLTKSKSILAATSGLQEYLDAFQQWAENWNVRINAEKCANVTFANRTGSC- 536
Query: 294 XXXXXXXNLTPPITLFRQPIPWARKVKYLGVTLDASMTFRPHIKSVRDRAAFILGRLYPM 473
P ++L + I + KYLG+TLD +TF HI +++ + R+ +
Sbjct: 537 ----------PGVSLNGRLIRHHQAYKYLGITLDRKLTFSRHITNIQQAFRTKVARMSWL 586
Query: 474 ICKRSKMSLRNKVTLYKTCIRPVMTYASVVFAHAARTHIDTLQSLQSRFCRLAVGASWFV 653
I R+K+SL KV +YK+ + P + Y V+ AA++H++ ++ LQ++ R GA W++
Sbjct: 587 IAPRNKLSLGCKVNIYKSILAPCLFYGLQVYGIAAKSHLNKIRILQAKTLRRISGAPWYM 646
Query: 654 RNVDLHDDL 680
R D+ DL
Sbjct: 647 RTRDIERDL 655
>AM040243-1|CAJ13339.1| 656|Drosophila melanogaster pol protein
protein.
Length = 656
Score = 74.1 bits (174), Expect = 2e-13
Identities = 52/203 (25%), Positives = 92/203 (45%), Gaps = 3/203 (1%)
Frame = +3
Query: 93 PRSPPTH--LALFADDTTVYYSSRNKSLIAKKLQSAALALGQWFRKWRIDINPAKSTAVL 266
P PT+ LA +ADDT + S+ L Q+ +W +KW I IN K+ +L
Sbjct: 275 PDYHPTNIILATYADDTIILSRSKYTKLAINLNQNYLNVFCRWSKKWDIAINAKKTGHIL 334
Query: 267 FQXXXXXXXXXXXXXXNLTPPITLFRQPIPWARKVKYLGVTLDASMTFRPHIKSVRDRAA 446
F TPP+ + Q K +YLG+ LD +TF H+ ++ +
Sbjct: 335 FSLKKEQTNIY-------TPPL-INGQRAAKLNKQRYLGLMLDRRLTFCAHMTLLKGKTI 386
Query: 447 FILGRLYPMICKRSKMSLRNKVTLYKTCIRPVMTYASVVFAH-AARTHIDTLQSLQSRFC 623
+L +I K S + K+ L+K + P+ YA ++ + T +Q++++++
Sbjct: 387 AAYKKLEWLIGKNSHLPKNAKILLWKQIVSPIWHYAIAIWGSLVSDTQAKKIQTMENKYI 446
Query: 624 RLAVGASWFVRNVDLHDDLGLES 692
R + AS + R D+ ++S
Sbjct: 447 RRIINASRYTRQADIRTKYNIKS 469
>AM040242-2|CAJ13338.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 74.1 bits (174), Expect = 2e-13
Identities = 52/203 (25%), Positives = 92/203 (45%), Gaps = 3/203 (1%)
Frame = +3
Query: 93 PRSPPTH--LALFADDTTVYYSSRNKSLIAKKLQSAALALGQWFRKWRIDINPAKSTAVL 266
P PT+ LA +ADDT + S+ L Q+ +W +KW I IN K+ +L
Sbjct: 722 PDYHPTNIILATYADDTIILSRSKYTKLAINLNQNYLNVFCRWSKKWDIAINAKKTGHIL 781
Query: 267 FQXXXXXXXXXXXXXXNLTPPITLFRQPIPWARKVKYLGVTLDASMTFRPHIKSVRDRAA 446
F TPP+ + Q K +YLG+ LD +TF H+ ++ +
Sbjct: 782 FSLKKEQTNIY-------TPPL-INGQRAAKLNKQRYLGLMLDRRLTFCAHMTLLKGKTI 833
Query: 447 FILGRLYPMICKRSKMSLRNKVTLYKTCIRPVMTYASVVFAH-AARTHIDTLQSLQSRFC 623
+L +I K S + K+ L+K + P+ YA ++ + T +Q++++++
Sbjct: 834 AAYKKLEWLIGKNSHLPKNAKILLWKQIVSPIWHYAIAIWGSLVSDTQAKKIQTMENKYI 893
Query: 624 RLAVGASWFVRNVDLHDDLGLES 692
R + AS + R D+ ++S
Sbjct: 894 RRIINASRYTRQADIRTKYNIKS 916
>AJ542582-2|CAD65871.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 74.1 bits (174), Expect = 2e-13
Identities = 52/203 (25%), Positives = 92/203 (45%), Gaps = 3/203 (1%)
Frame = +3
Query: 93 PRSPPTH--LALFADDTTVYYSSRNKSLIAKKLQSAALALGQWFRKWRIDINPAKSTAVL 266
P PT+ LA +ADDT + S+ L Q+ +W +KW I IN K+ +L
Sbjct: 722 PDYHPTNIILATYADDTIILSRSKYTKLAINLNQNYLNVFCRWSKKWDIAINAKKTGHIL 781
Query: 267 FQXXXXXXXXXXXXXXNLTPPITLFRQPIPWARKVKYLGVTLDASMTFRPHIKSVRDRAA 446
F TPP+ + Q K +YLG+ LD +TF H+ ++ +
Sbjct: 782 FSLKKEQTNIY-------TPPL-INGQRAAKLNKQRYLGLMLDRRLTFCAHMTLLKGKTI 833
Query: 447 FILGRLYPMICKRSKMSLRNKVTLYKTCIRPVMTYASVVFAH-AARTHIDTLQSLQSRFC 623
+L +I K S + K+ L+K + P+ YA ++ + T +Q++++++
Sbjct: 834 AAYKKLEWLIGKNSHLPKNAKILLWKQIVSPIWHYAIAIWGSLVSDTQAKKIQTMENKYI 893
Query: 624 RLAVGASWFVRNVDLHDDLGLES 692
R + AS + R D+ ++S
Sbjct: 894 RRIINASRYTRQADIRTKYNIKS 916
>AJ542581-2|CAD65869.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 74.1 bits (174), Expect = 2e-13
Identities = 52/203 (25%), Positives = 92/203 (45%), Gaps = 3/203 (1%)
Frame = +3
Query: 93 PRSPPTH--LALFADDTTVYYSSRNKSLIAKKLQSAALALGQWFRKWRIDINPAKSTAVL 266
P PT+ LA +ADDT + S+ L Q+ +W +KW I IN K+ +L
Sbjct: 722 PDYHPTNIILATYADDTIILSRSKYTKLAINLNQNYLNVFCRWSKKWDIAINAKKTGHIL 781
Query: 267 FQXXXXXXXXXXXXXXNLTPPITLFRQPIPWARKVKYLGVTLDASMTFRPHIKSVRDRAA 446
F TPP+ + Q K +YLG+ LD +TF H+ ++ +
Sbjct: 782 FSLKKEQTNIY-------TPPL-INGQRAAKLNKQRYLGLMLDRRLTFCAHMTLLKGKTI 833
Query: 447 FILGRLYPMICKRSKMSLRNKVTLYKTCIRPVMTYASVVFAH-AARTHIDTLQSLQSRFC 623
+L +I K S + K+ L+K + P+ YA ++ + T +Q++++++
Sbjct: 834 AAYKKLEWLIGKNSHLPKNAKILLWKQIVSPIWHYAIAIWGSLVSDTQAKKIQTMENKYI 893
Query: 624 RLAVGASWFVRNVDLHDDLGLES 692
R + AS + R D+ ++S
Sbjct: 894 RRIINASRYTRQADIRTKYNIKS 916
>AY600955-2|AAT12845.1| 1092|Drosophila melanogaster pol protein
protein.
Length = 1092
Score = 66.1 bits (154), Expect = 4e-11
Identities = 51/210 (24%), Positives = 89/210 (42%), Gaps = 4/210 (1%)
Frame = +3
Query: 84 PDIPRSPPTH---LALFADDTTVYYSSRNKSLIAKKLQSAALALGQWFRKWRIDINPAKS 254
P I R PT L+ +ADDT V S + + ++ W KW I +N AK+
Sbjct: 719 PYIYRPSPTQRIMLSTYADDTIVLSSDTLATAATRNNENYLKTFSDWADKWGISVNAAKT 778
Query: 255 TAVLFQXXXXXXXXXXXXXXNLTPPITLFRQPIPWARKVKYLGVTLDASMTFRPHIKSVR 434
V+F + + Q I K YLGVTLD+ +T H+ +
Sbjct: 779 GHVIFTLKNDLPTNSMN--------VKIKGQTIKKESKQSYLGVTLDSKLTLSSHVTKLL 830
Query: 435 DRAAFILGRLYPMICKRSKMSLRNKVTLYKTCIRPVMTYASVVFAH-AARTHIDTLQSLQ 611
+ + +L ++ RSK+ + K+ + K+ + P+ YA + I +Q +
Sbjct: 831 GKYSTAYRKLTWILNGRSKLPTKTKILILKSVLSPIWQYAIAAWGPLVTDAQIRRVQVEE 890
Query: 612 SRFCRLAVGASWFVRNVDLHDDLGLESIRK 701
+R R A + RN + D G++++ +
Sbjct: 891 NRKIRDICRAGRYTRNQTIRDLFGVKTVEE 920
>U14101-2|AAC46494.1| 1084|Drosophila melanogaster putative reverse
transcriptase protein.
Length = 1084
Score = 61.7 bits (143), Expect = 1e-09
Identities = 48/210 (22%), Positives = 88/210 (41%), Gaps = 4/210 (1%)
Frame = +3
Query: 84 PDIPRSPPTH---LALFADDTTVYYSSRNKSLIAKKLQSAALALGQWFRKWRIDINPAKS 254
P I R PT L+ +ADDT V S + + ++ + W KW I +N AK+
Sbjct: 707 PYIYRPSPTERIMLSTYADDTIVLSSDTLATAATRNNENYLKSFSDWADKWGISVNAAKT 766
Query: 255 TAVLFQXXXXXXXXXXXXXXNLTPPITLFRQPIPWARKVKYLGVTLDASMTFRPHIKSVR 434
V+F + + Q I K YLGV LD+ +T H+ +
Sbjct: 767 GHVIFTLKNDLPTSLRT--------MKIKGQVIKIESKQSYLGVILDSKLTLSSHVTKLM 818
Query: 435 DRAAFILGRLYPMICKRSKMSLRNKVTLYKTCIRPVMTYASVVFAH-AARTHIDTLQSLQ 611
+ ++ ++ +RSK+ + K+ + K+ + P+ YA + I +Q +
Sbjct: 819 GKYTTAYRKMTWILNRRSKLPTKTKMLILKSVLSPIWQYAIAAWGPLVTDAQIRRIQVEE 878
Query: 612 SRFCRLAVGASWFVRNVDLHDDLGLESIRK 701
+R R A + N + D G++++ +
Sbjct: 879 NRKMRDICRAGRYTSNQTIRDRYGIKTVEE 908
>U02279-1|AAA18301.1| 964|Drosophila melanogaster protein (
Drosophila melanogastertelomere-associated transposons
TART, TART-A and HeT-A,and TART-A ORF2 gene, partial cds.
).
Length = 964
Score = 58.8 bits (136), Expect = 7e-09
Identities = 49/210 (23%), Positives = 88/210 (41%), Gaps = 4/210 (1%)
Frame = +3
Query: 84 PDIPRSPPTH---LALFADDTTVYYSSRNKSLIAKKLQSAALALGQWFRKWRIDINPAKS 254
P I PT L+ +ADDT V S + + ++ W KW I +N AK+
Sbjct: 591 PHIYHPSPTERIMLSTYADDTIVLSSDILATAATRNNENYLKTFSDWADKWGISVNAAKT 650
Query: 255 TAVLFQXXXXXXXXXXXXXXNLTPPITLFRQPIPWARKVKYLGVTLDASMTFRPHIKSVR 434
V++ NL + + Q I K YLGV LD+ +T PH+ V
Sbjct: 651 GHVIYTLKNDIPT-------NLKT-MKIKGQAIKKESKQSYLGVILDSKLTLSPHVTKVV 702
Query: 435 DRAAFILGRLYPMICKRSKMSLRNKVTLYKTCIRPVMTYASVVFAH-AARTHIDTLQSLQ 611
+ ++ ++ +RSK+ K+ + K+ + P+ YA + I +Q +
Sbjct: 703 GKYLTAYRKMSWILNERSKLPTNTKMLILKSVLSPIWQYAIAAWGPLVTDAQIRRIQVEE 762
Query: 612 SRFCRLAVGASWFVRNVDLHDDLGLESIRK 701
+R R A + +N + D ++++ +
Sbjct: 763 NRKMRDICRAGRYTKNQTIRDRYCVKTVEE 792
>AY561850-2|AAS68534.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 58.8 bits (136), Expect = 7e-09
Identities = 49/210 (23%), Positives = 88/210 (41%), Gaps = 4/210 (1%)
Frame = +3
Query: 84 PDIPRSPPTH---LALFADDTTVYYSSRNKSLIAKKLQSAALALGQWFRKWRIDINPAKS 254
P I PT L+ +ADDT V S + + ++ W KW I +N AK+
Sbjct: 707 PHIYHPSPTERIMLSTYADDTIVLSSDILATAATRNNENYLKTFSDWADKWGISVNAAKT 766
Query: 255 TAVLFQXXXXXXXXXXXXXXNLTPPITLFRQPIPWARKVKYLGVTLDASMTFRPHIKSVR 434
V++ NL + + Q I K YLGV LD+ +T PH+ V
Sbjct: 767 GHVIYTLKNDIPT-------NLKT-MKIKGQAIKKESKQSYLGVILDSKLTLSPHVTKVV 818
Query: 435 DRAAFILGRLYPMICKRSKMSLRNKVTLYKTCIRPVMTYASVVFAH-AARTHIDTLQSLQ 611
+ ++ ++ +RSK+ K+ + K+ + P+ YA + I +Q +
Sbjct: 819 GKYLTAYRKMSWILNERSKLPTNTKMLILKSVLSPIWQYAIAAWGPLVTDAQIRRIQVEE 878
Query: 612 SRFCRLAVGASWFVRNVDLHDDLGLESIRK 701
+R R A + +N + D ++++ +
Sbjct: 879 NRKMRDICRAGRYTKNQTIRDRYCVKTVEE 908
>AY035777-2|AAK77971.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 58.8 bits (136), Expect = 7e-09
Identities = 49/210 (23%), Positives = 88/210 (41%), Gaps = 4/210 (1%)
Frame = +3
Query: 84 PDIPRSPPTH---LALFADDTTVYYSSRNKSLIAKKLQSAALALGQWFRKWRIDINPAKS 254
P I PT L+ +ADDT V S + + ++ W KW I +N AK+
Sbjct: 707 PHIYHPSPTERIMLSTYADDTIVLSSDILATAATRNNENYLKTFSDWADKWGISVNAAKT 766
Query: 255 TAVLFQXXXXXXXXXXXXXXNLTPPITLFRQPIPWARKVKYLGVTLDASMTFRPHIKSVR 434
V++ NL + + Q I K YLGV LD+ +T PH+ V
Sbjct: 767 GHVIYTLKNDIPT-------NLKT-MKIKGQAIKKESKQSYLGVILDSKLTLSPHVTKVV 818
Query: 435 DRAAFILGRLYPMICKRSKMSLRNKVTLYKTCIRPVMTYASVVFAH-AARTHIDTLQSLQ 611
+ ++ ++ +RSK+ K+ + K+ + P+ YA + I +Q +
Sbjct: 819 GKYLTAYRKMSWILNERSKLPTNTKMLILKSVLSPIWQYAIAAWGPLVTDAQIRRIQVEE 878
Query: 612 SRFCRLAVGASWFVRNVDLHDDLGLESIRK 701
+R R A + +N + D ++++ +
Sbjct: 879 NRKMRDICRAGRYTKNQTIRDRYCVKTVEE 908
>AM040245-1|CAJ13341.1| 1042|Drosophila melanogaster pol protein
protein.
Length = 1042
Score = 58.8 bits (136), Expect = 7e-09
Identities = 49/210 (23%), Positives = 88/210 (41%), Gaps = 4/210 (1%)
Frame = +3
Query: 84 PDIPRSPPTH---LALFADDTTVYYSSRNKSLIAKKLQSAALALGQWFRKWRIDINPAKS 254
P I PT L+ +ADDT V S + + ++ W KW I +N AK+
Sbjct: 669 PHIYHPSPTERIMLSTYADDTIVLSSDILATAATRNNENYLKTFSDWADKWGISVNAAKT 728
Query: 255 TAVLFQXXXXXXXXXXXXXXNLTPPITLFRQPIPWARKVKYLGVTLDASMTFRPHIKSVR 434
V++ NL + + Q I K YLGV LD+ +T PH+ V
Sbjct: 729 GHVIYTLKNDIPT-------NLKT-MKIKGQAIKKESKQSYLGVILDSKLTLSPHVTKVV 780
Query: 435 DRAAFILGRLYPMICKRSKMSLRNKVTLYKTCIRPVMTYASVVFAH-AARTHIDTLQSLQ 611
+ ++ ++ +RSK+ K+ + K+ + P+ YA + I +Q +
Sbjct: 781 GKYLTAYRKMSWILNERSKLPTNTKMLILKSVLSPIWQYAIAAWGPLVTDAQIRRIQVEE 840
Query: 612 SRFCRLAVGASWFVRNVDLHDDLGLESIRK 701
+R R A + +N + D ++++ +
Sbjct: 841 NRKMRDICRAGRYTKNQTIRDRYCVKTVEE 870
>AJ566116-2|CAD92793.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 58.8 bits (136), Expect = 7e-09
Identities = 49/210 (23%), Positives = 88/210 (41%), Gaps = 4/210 (1%)
Frame = +3
Query: 84 PDIPRSPPTH---LALFADDTTVYYSSRNKSLIAKKLQSAALALGQWFRKWRIDINPAKS 254
P I PT L+ +ADDT V S + + ++ W KW I +N AK+
Sbjct: 707 PHIYHPSPTERIMLSTYADDTIVLSSDILATAATRNNENYLKTFSDWADKWGISVNAAKT 766
Query: 255 TAVLFQXXXXXXXXXXXXXXNLTPPITLFRQPIPWARKVKYLGVTLDASMTFRPHIKSVR 434
V++ NL + + Q I K YLGV LD+ +T PH+ V
Sbjct: 767 GHVIYTLKNDIPT-------NLKT-MKIKGQAIKKESKQSYLGVILDSKLTLSPHVTKVV 818
Query: 435 DRAAFILGRLYPMICKRSKMSLRNKVTLYKTCIRPVMTYASVVFAH-AARTHIDTLQSLQ 611
+ ++ ++ +RSK+ K+ + K+ + P+ YA + I +Q +
Sbjct: 819 GKYLTAYRKMSWILNERSKLPTNTKMLILKSVLSPIWQYAIAAWGPLVTDAQIRRIQVEE 878
Query: 612 SRFCRLAVGASWFVRNVDLHDDLGLESIRK 701
+R R A + +N + D ++++ +
Sbjct: 879 NRKMRDICRAGRYTKNQTIRDRYCVKTVEE 908
>U14102-1|AAC46495.1| 299|Drosophila melanogaster putative reverse
transcriptase protein.
Length = 299
Score = 45.6 bits (103), Expect = 7e-05
Identities = 27/120 (22%), Positives = 55/120 (45%), Gaps = 1/120 (0%)
Frame = +3
Query: 345 QPIPWARKVKYLGVTLDASMTFRPHIKSVRDRAAFILGRLYPMICKRSKMSLRNKVTLYK 524
Q I K YLGV LD+ +T H+ + + ++ ++ +RSK+ + K+ + K
Sbjct: 4 QVIKIESKQSYLGVILDSKLTLSSHVTKLMGKYTTAYRKMTWILNRRSKLPTKTKMLILK 63
Query: 525 TCIRPVMTYASVVFAH-AARTHIDTLQSLQSRFCRLAVGASWFVRNVDLHDDLGLESIRK 701
+ + P+ YA + I +Q ++R R A + N + D G++++ +
Sbjct: 64 SVLSPIWQYAIAAWGPLVTDAQIRRIQVEENRKMRDICRAGRYTSNQTIRDRYGIKTVEE 123
>X51968-2|CAA36227.1| 1021|Drosophila melanogaster protein (
Drosophila melanogasterDNA for type I retrotransposable
element R1Dm. ).
Length = 1021
Score = 45.2 bits (102), Expect = 9e-05
Identities = 23/85 (27%), Positives = 42/85 (49%)
Frame = +3
Query: 324 PPITLFRQPIPWARKVKYLGVTLDASMTFRPHIKSVRDRAAFILGRLYPMICKRSKMSLR 503
P + + +P+ R +YLG+T+ M F HI S+R R ++G L ++ S R
Sbjct: 719 PTVRFAGRNLPYVRSCRYLGITVSEGMKFLTHIASLRQRMTGVVGALARVLRADWGFSPR 778
Query: 504 NKVTLYKTCIRPVMTYASVVFAHAA 578
+ T+Y + P + + + V+ A
Sbjct: 779 ARRTIYDGLMAPCVLFGAPVWYDTA 803
>M14954-2|AAA70222.2| 1219|Drosophila melanogaster putative ORF2
protein.
Length = 1219
Score = 31.1 bits (67), Expect = 1.5
Identities = 20/97 (20%), Positives = 44/97 (45%)
Frame = +3
Query: 351 IPWARKVKYLGVTLDASMTFRPHIKSVRDRAAFILGRLYPMICKRSKMSLRNKVTLYKTC 530
IP +K LG+TL+ + HI + + L + + + + + + K
Sbjct: 731 IPSVTSLKILGITLNNKYKWNTHINLLLPKLHNKLNIIKCLSSLKFNCNTHTLLNVAKAT 790
Query: 531 IRPVMTYASVVFAHAARTHIDTLQSLQSRFCRLAVGA 641
I + Y ++ HA ++ ++ +++ + RLA+GA
Sbjct: 791 IIAKLEYGLFLYGHAPKSILNKIKTPFNSAIRLALGA 827
>AJ278684-2|CAB99192.1| 989|Drosophila melanogaster
endonuclease/reverse transcriptase protein.
Length = 989
Score = 29.1 bits (62), Expect = 6.2
Identities = 14/42 (33%), Positives = 23/42 (54%), Gaps = 3/42 (7%)
Frame = +3
Query: 360 ARKVKYLGVTLDASMTFRPHIKSVRDRAAF---ILGRLYPMI 476
A +KYLGV +D ++F+ H + +AA L R+ P +
Sbjct: 714 AETLKYLGVLIDRRLSFKAHARYASKKAAMTAAALARIMPNV 755
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,959,323
Number of Sequences: 53049
Number of extensions: 759458
Number of successful extensions: 1842
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 1714
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1826
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3149551053
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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