Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--2015
         (670 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF003140-5|AAD47120.1|  814|Caenorhabditis elegans Hypothetical ...    52   4e-07
AF003140-4|AAD47119.1| 2712|Caenorhabditis elegans Hypothetical ...    52   4e-07
AF003140-3|AAM15563.1| 2710|Caenorhabditis elegans Hypothetical ...    52   4e-07
AF100305-5|AAN65285.1|  353|Caenorhabditis elegans Hypothetical ...    31   0.98 
AF100305-4|AAC68916.2|  426|Caenorhabditis elegans Hypothetical ...    31   0.98 
AF100305-3|AAL65795.1|  426|Caenorhabditis elegans Hypothetical ...    31   0.98 
Z79605-8|CAE18060.2|  340|Caenorhabditis elegans Hypothetical pr...    30   1.3  
AL034489-11|CAL49453.1|  340|Caenorhabditis elegans Hypothetical...    30   1.3  
Z66495-4|CAA91271.1|  954|Caenorhabditis elegans Hypothetical pr...    29   3.9  
Z92789-7|CAB07215.2| 1319|Caenorhabditis elegans Hypothetical pr...    28   5.2  
AL032646-12|CAA21685.2|  411|Caenorhabditis elegans Hypothetical...    28   5.2  
U23514-5|AAC46541.2|  590|Caenorhabditis elegans Phosphatase 2a ...    28   6.9  
Z96047-6|CAB09416.1|  922|Caenorhabditis elegans Hypothetical pr...    27   9.1  
AF024614-1|AAB97161.1|  922|Caenorhabditis elegans ADAM 10 protein.    27   9.1  

>AF003140-5|AAD47120.1|  814|Caenorhabditis elegans Hypothetical
           protein C44E4.1b protein.
          Length = 814

 Score = 52.0 bits (119), Expect = 4e-07
 Identities = 22/65 (33%), Positives = 42/65 (64%)
 Frame = -2

Query: 420 HEPTQMLVCEKVIPIVHRLEQVSSGEHVGSLAENLLXXXRSQPQCAAKIQQVREFTRQEK 241
           H+ +Q  + +  + ++HRLEQV+S   +G+LAEN++       +   +I+ VR+ T ++K
Sbjct: 417 HQASQKEIAKTTLKLMHRLEQVASDNSIGTLAENVIEALNEDEEVRNQIKLVRDETEKKK 476

Query: 240 KRLAM 226
           K++AM
Sbjct: 477 KQMAM 481



 Score = 30.3 bits (65), Expect = 1.3
 Identities = 18/42 (42%), Positives = 26/42 (61%), Gaps = 1/42 (2%)
 Frame = -1

Query: 550 YIVKHAPCV-KPTLVCSDSDDLKEFISRPALKYILRFLTGLA 428
           Y+ K  P + +PT    +S + K F++RP+LK IL  L GLA
Sbjct: 377 YLTKDLPNLYQPT----ESPEWKVFLARPSLKLILTLLAGLA 414


>AF003140-4|AAD47119.1| 2712|Caenorhabditis elegans Hypothetical
            protein C44E4.1a protein.
          Length = 2712

 Score = 52.0 bits (119), Expect = 4e-07
 Identities = 22/65 (33%), Positives = 42/65 (64%)
 Frame = -2

Query: 420  HEPTQMLVCEKVIPIVHRLEQVSSGEHVGSLAENLLXXXRSQPQCAAKIQQVREFTRQEK 241
            H+ +Q  + +  + ++HRLEQV+S   +G+LAEN++       +   +I+ VR+ T ++K
Sbjct: 2315 HQASQKEIAKTTLKLMHRLEQVASDNSIGTLAENVIEALNEDEEVRNQIKLVRDETEKKK 2374

Query: 240  KRLAM 226
            K++AM
Sbjct: 2375 KQMAM 2379



 Score = 30.3 bits (65), Expect = 1.3
 Identities = 18/42 (42%), Positives = 26/42 (61%), Gaps = 1/42 (2%)
 Frame = -1

Query: 550  YIVKHAPCV-KPTLVCSDSDDLKEFISRPALKYILRFLTGLA 428
            Y+ K  P + +PT    +S + K F++RP+LK IL  L GLA
Sbjct: 2275 YLTKDLPNLYQPT----ESPEWKVFLARPSLKLILTLLAGLA 2312


>AF003140-3|AAM15563.1| 2710|Caenorhabditis elegans Hypothetical
            protein C44E4.1c protein.
          Length = 2710

 Score = 52.0 bits (119), Expect = 4e-07
 Identities = 22/65 (33%), Positives = 42/65 (64%)
 Frame = -2

Query: 420  HEPTQMLVCEKVIPIVHRLEQVSSGEHVGSLAENLLXXXRSQPQCAAKIQQVREFTRQEK 241
            H+ +Q  + +  + ++HRLEQV+S   +G+LAEN++       +   +I+ VR+ T ++K
Sbjct: 2313 HQASQKEIAKTTLKLMHRLEQVASDNSIGTLAENVIEALNEDEEVRNQIKLVRDETEKKK 2372

Query: 240  KRLAM 226
            K++AM
Sbjct: 2373 KQMAM 2377



 Score = 30.3 bits (65), Expect = 1.3
 Identities = 18/42 (42%), Positives = 26/42 (61%), Gaps = 1/42 (2%)
 Frame = -1

Query: 550  YIVKHAPCV-KPTLVCSDSDDLKEFISRPALKYILRFLTGLA 428
            Y+ K  P + +PT    +S + K F++RP+LK IL  L GLA
Sbjct: 2273 YLTKDLPNLYQPT----ESPEWKVFLARPSLKLILTLLAGLA 2310


>AF100305-5|AAN65285.1|  353|Caenorhabditis elegans Hypothetical
           protein W04B5.3c protein.
          Length = 353

 Score = 30.7 bits (66), Expect = 0.98
 Identities = 15/31 (48%), Positives = 18/31 (58%)
 Frame = +3

Query: 156 AVTCPRSLLRMPSAPSCRPLSRTASPTASSP 248
           A T P + + MP  PS  PLS T +PT S P
Sbjct: 268 AYTSPYTSVPMPQPPSSVPLSYTPAPTPSVP 298


>AF100305-4|AAC68916.2|  426|Caenorhabditis elegans Hypothetical
           protein W04B5.3a protein.
          Length = 426

 Score = 30.7 bits (66), Expect = 0.98
 Identities = 15/31 (48%), Positives = 18/31 (58%)
 Frame = +3

Query: 156 AVTCPRSLLRMPSAPSCRPLSRTASPTASSP 248
           A T P + + MP  PS  PLS T +PT S P
Sbjct: 268 AYTSPYTSVPMPQPPSSVPLSYTPAPTPSVP 298


>AF100305-3|AAL65795.1|  426|Caenorhabditis elegans Hypothetical
           protein W04B5.3b protein.
          Length = 426

 Score = 30.7 bits (66), Expect = 0.98
 Identities = 15/31 (48%), Positives = 18/31 (58%)
 Frame = +3

Query: 156 AVTCPRSLLRMPSAPSCRPLSRTASPTASSP 248
           A T P + + MP  PS  PLS T +PT S P
Sbjct: 268 AYTSPYTSVPMPQPPSSVPLSYTPAPTPSVP 298


>Z79605-8|CAE18060.2|  340|Caenorhabditis elegans Hypothetical
           protein ZK678.8 protein.
          Length = 340

 Score = 30.3 bits (65), Expect = 1.3
 Identities = 14/43 (32%), Positives = 20/43 (46%)
 Frame = -3

Query: 377 LCIVWNKCLRANTWDPSPRTCXRXCGPSRSAQPKYNKSENLPD 249
           LC   +  L     DP  +TC     P+R A P+  K + +PD
Sbjct: 56  LCYTQSDLLSTEPRDPDFQTCVNKFFPNREADPENCKLDKIPD 98


>AL034489-11|CAL49453.1|  340|Caenorhabditis elegans Hypothetical
           protein ZK678.8 protein.
          Length = 340

 Score = 30.3 bits (65), Expect = 1.3
 Identities = 14/43 (32%), Positives = 20/43 (46%)
 Frame = -3

Query: 377 LCIVWNKCLRANTWDPSPRTCXRXCGPSRSAQPKYNKSENLPD 249
           LC   +  L     DP  +TC     P+R A P+  K + +PD
Sbjct: 56  LCYTQSDLLSTEPRDPDFQTCVNKFFPNREADPENCKLDKIPD 98


>Z66495-4|CAA91271.1|  954|Caenorhabditis elegans Hypothetical
           protein C36A4.5 protein.
          Length = 954

 Score = 28.7 bits (61), Expect = 3.9
 Identities = 13/33 (39%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
 Frame = +3

Query: 156 AVTCPRSLL-RMPSAPSCRPLSRTASPTASSPV 251
           AV+ PR+L  R P+ P+C   +R+A+P   + V
Sbjct: 340 AVSAPRALTSRAPTGPACPTTTRSAAPATRTAV 372


>Z92789-7|CAB07215.2| 1319|Caenorhabditis elegans Hypothetical
           protein H02I12.1 protein.
          Length = 1319

 Score = 28.3 bits (60), Expect = 5.2
 Identities = 10/24 (41%), Positives = 16/24 (66%)
 Frame = -1

Query: 286 RSQNTTSPRIYQTGEEAVGDAVRE 215
           +   TT+P++Y+ GEE  G+A  E
Sbjct: 149 KQDTTTAPQVYEDGEEGYGEASGE 172


>AL032646-12|CAA21685.2|  411|Caenorhabditis elegans Hypothetical
           protein Y54E2A.12 protein.
          Length = 411

 Score = 28.3 bits (60), Expect = 5.2
 Identities = 18/90 (20%), Positives = 42/90 (46%), Gaps = 8/90 (8%)
 Frame = -2

Query: 495 TILRSSSVVPLSNIYYASSPDL-------LLDHEPTQMLVCEKVIPIVHR-LEQVSSGEH 340
           T+ +   +V   +++ ASSP L       ++      +L CE+ +P +HR L ++     
Sbjct: 280 TLKQYQQIVRFFDVFLASSPLLPIYVSAAVVVFRRASILACEREMPFLHRLLTEMPHELP 339

Query: 339 VGSLAENLLXXXRSQPQCAAKIQQVREFTR 250
           + ++ ++ +   +  P C  K +   E+ +
Sbjct: 340 IDTIIKDSVYLSKLMPPCLLKTKYTNEYRK 369


>U23514-5|AAC46541.2|  590|Caenorhabditis elegans Phosphatase 2a
           regulatory a subunitprotein 1 protein.
          Length = 590

 Score = 27.9 bits (59), Expect = 6.9
 Identities = 16/49 (32%), Positives = 28/49 (57%)
 Frame = -2

Query: 402 LVCEKVIPIVHRLEQVSSGEHVGSLAENLLXXXRSQPQCAAKIQQVREF 256
           +V EK+I I + L +     H+ ++  NLL     + +CAA  Q+++EF
Sbjct: 264 MVAEKLIEIQNVLGEDMDTTHLVNMYTNLLKDPEGEVRCAA-TQRLQEF 311


>Z96047-6|CAB09416.1|  922|Caenorhabditis elegans Hypothetical
           protein DY3.7 protein.
          Length = 922

 Score = 27.5 bits (58), Expect = 9.1
 Identities = 14/43 (32%), Positives = 16/43 (37%)
 Frame = +3

Query: 504 EHTKVGFTHGACFTIYSKCITNKPQAI*GSPSRCLRSNSAQCS 632
           E    GF+   C  +  KC         G P  C R   AQCS
Sbjct: 523 EECDCGFSQADCDQMGDKCCVPHEARGNGGPGPCKRKPGAQCS 565


>AF024614-1|AAB97161.1|  922|Caenorhabditis elegans ADAM 10 protein.
          Length = 922

 Score = 27.5 bits (58), Expect = 9.1
 Identities = 14/43 (32%), Positives = 16/43 (37%)
 Frame = +3

Query: 504 EHTKVGFTHGACFTIYSKCITNKPQAI*GSPSRCLRSNSAQCS 632
           E    GF+   C  +  KC         G P  C R   AQCS
Sbjct: 523 EECDCGFSQADCDQMGDKCCVPHEARGNGGPGPCKRKPGAQCS 565


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,815,725
Number of Sequences: 27780
Number of extensions: 301806
Number of successful extensions: 1040
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 965
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1038
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1508017654
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)