Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--2012
         (344 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC090886-1|AAH90886.1|  400|Homo sapiens chromosome 1 open readi...    31   0.73 
AL133320-3|CAI21782.1|  400|Homo sapiens chromosome 1 open readi...    31   0.73 
Y18064-1|CAA77022.1|  890|Homo sapiens wolframin protein.              29   5.2  
BC030130-1|AAH30130.1|  890|Homo sapiens WFS1 protein protein.         29   5.2  
AF084481-1|AAC64943.1|  890|Homo sapiens transmembrane protein p...    29   5.2  
X13988-1|CAA32167.1| 1940|Homo sapiens protein ( Human mRNA for ...    28   9.0  
BC093815-1|AAH93815.1| 1135|Homo sapiens protocadherin 18 protein.     28   9.0  
AB046782-1|BAB13388.1| 1136|Homo sapiens KIAA1562 protein protein.     28   9.0  

>BC090886-1|AAH90886.1|  400|Homo sapiens chromosome 1 open reading
           frame 141 protein.
          Length = 400

 Score = 31.5 bits (68), Expect = 0.73
 Identities = 16/50 (32%), Positives = 23/50 (46%)
 Frame = -1

Query: 200 NLSQNVSELNDNYPGFYESLVPKELSTQQKRFESVLVHANKTEITLMTLL 51
           N SQN S L   + G+ +  V  E+S Q  +FE +      T I   + L
Sbjct: 316 NFSQNFSSLTKQFVGYLDKAVIHEMSAQTGKFERMFSAGKPTSIPTSSAL 365


>AL133320-3|CAI21782.1|  400|Homo sapiens chromosome 1 open reading
           frame 141 protein.
          Length = 400

 Score = 31.5 bits (68), Expect = 0.73
 Identities = 16/50 (32%), Positives = 23/50 (46%)
 Frame = -1

Query: 200 NLSQNVSELNDNYPGFYESLVPKELSTQQKRFESVLVHANKTEITLMTLL 51
           N SQN S L   + G+ +  V  E+S Q  +FE +      T I   + L
Sbjct: 316 NFSQNFSSLTKQFVGYLDKAVIHEMSAQTGKFERMFSAGKPTSIPTSSAL 365


>Y18064-1|CAA77022.1|  890|Homo sapiens wolframin protein.
          Length = 890

 Score = 28.7 bits (61), Expect = 5.2
 Identities = 14/48 (29%), Positives = 25/48 (52%)
 Frame = -1

Query: 206 IDNLSQNVSELNDNYPGFYESLVPKELSTQQKRFESVLVHANKTEITL 63
           +  L +NV ++N++  G     VPK L  Q++  E ++   +K  I L
Sbjct: 197 VAELLENVGQVNEHDGGAQPGPVPKSLQKQRRMLERLVSSESKNYIAL 244


>BC030130-1|AAH30130.1|  890|Homo sapiens WFS1 protein protein.
          Length = 890

 Score = 28.7 bits (61), Expect = 5.2
 Identities = 14/48 (29%), Positives = 25/48 (52%)
 Frame = -1

Query: 206 IDNLSQNVSELNDNYPGFYESLVPKELSTQQKRFESVLVHANKTEITL 63
           +  L +NV ++N++  G     VPK L  Q++  E ++   +K  I L
Sbjct: 197 VAELLENVGQVNEHDGGAQPGPVPKSLQKQRRMLERLVSSESKNYIAL 244


>AF084481-1|AAC64943.1|  890|Homo sapiens transmembrane protein
           protein.
          Length = 890

 Score = 28.7 bits (61), Expect = 5.2
 Identities = 14/48 (29%), Positives = 25/48 (52%)
 Frame = -1

Query: 206 IDNLSQNVSELNDNYPGFYESLVPKELSTQQKRFESVLVHANKTEITL 63
           +  L +NV ++N++  G     VPK L  Q++  E ++   +K  I L
Sbjct: 197 VAELLENVGQVNEHDGGAQPGPVPKSLQKQRRMLERLVSSESKNYIAL 244


>X13988-1|CAA32167.1| 1940|Homo sapiens protein ( Human mRNA for
           embryonic myosin heavy chain. ).
          Length = 1940

 Score = 27.9 bits (59), Expect = 9.0
 Identities = 14/61 (22%), Positives = 31/61 (50%), Gaps = 2/61 (3%)
 Frame = -1

Query: 203 DNLSQNVSELNDNYPGFYESLVPKELSTQQKRFESVLVHANKTEITL--MTLLQKSFTDK 30
           +NL++ +S L   +P F   ++P E  T      S+++H  +    L  + + +K F ++
Sbjct: 654 ENLNKLMSNLRTTHPHFVRCIIPNETKTPGAMEHSLVLHQLRCNGVLEGIRICRKGFPNR 713

Query: 29  L 27
           +
Sbjct: 714 I 714


>BC093815-1|AAH93815.1| 1135|Homo sapiens protocadherin 18 protein.
          Length = 1135

 Score = 27.9 bits (59), Expect = 9.0
 Identities = 11/29 (37%), Positives = 19/29 (65%)
 Frame = -1

Query: 209 EIDNLSQNVSELNDNYPGFYESLVPKELS 123
           ++ ++   V ++NDN P F  SL+P E+S
Sbjct: 119 QLFHIEVEVLDINDNSPQFSRSLIPIEIS 147


>AB046782-1|BAB13388.1| 1136|Homo sapiens KIAA1562 protein protein.
          Length = 1136

 Score = 27.9 bits (59), Expect = 9.0
 Identities = 11/29 (37%), Positives = 19/29 (65%)
 Frame = -1

Query: 209 EIDNLSQNVSELNDNYPGFYESLVPKELS 123
           ++ ++   V ++NDN P F  SL+P E+S
Sbjct: 120 QLFHIEVEVLDINDNSPQFSRSLIPIEIS 148


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 36,678,216
Number of Sequences: 237096
Number of extensions: 600844
Number of successful extensions: 1477
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1420
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1475
length of database: 76,859,062
effective HSP length: 80
effective length of database: 57,891,382
effective search space used: 1968306988
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)