Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--2007
(614 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 336 9e-93
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 336 9e-93
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 336 9e-93
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 336 9e-93
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 336 9e-93
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 336 9e-93
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 335 2e-92
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 333 5e-92
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 325 2e-89
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 300 6e-82
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 256 1e-68
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 194 4e-50
J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein ( C.ele... 171 3e-43
J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein ( C.ele... 171 3e-43
J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein ( C.ele... 170 6e-43
J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein ( C.ele... 165 3e-41
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 157 8e-39
AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 130 6e-31
AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical ... 102 2e-22
Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical pr... 46 2e-05
U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related p... 46 2e-05
AL132943-5|CAB81977.1| 367|Caenorhabditis elegans Hypothetical ... 29 2.0
AF099923-3|AAN63403.1| 784|Caenorhabditis elegans Ferm domain (... 29 2.0
AF099923-2|AAM48544.1| 814|Caenorhabditis elegans Ferm domain (... 29 2.0
AF099923-1|AAM48545.1| 853|Caenorhabditis elegans Ferm domain (... 29 2.0
Z81047-2|CAB02828.1| 376|Caenorhabditis elegans Hypothetical pr... 28 4.6
U46675-7|AAB52641.1| 1274|Caenorhabditis elegans Hypothetical pr... 28 4.6
AF003147-1|AAB54205.2| 569|Caenorhabditis elegans Hypothetical ... 28 6.1
AC006701-1|AAM97962.1| 327|Caenorhabditis elegans Hypothetical ... 28 6.1
Z75955-5|CAB00119.2| 285|Caenorhabditis elegans Hypothetical pr... 27 8.1
AL132864-1|CAB63392.1| 613|Caenorhabditis elegans Hypothetical ... 27 8.1
AF025453-5|AAY55851.1| 279|Caenorhabditis elegans Hypothetical ... 27 8.1
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 336 bits (825), Expect = 9e-93
Identities = 160/181 (88%), Positives = 164/181 (90%)
Frame = +3
Query: 72 MCDEEVAALVVDNXSGMCKAGFAGDDAPRTVFPSIVGRPRHQGGWGWVGMGQKDSYVGDE 251
MCD+EVAALVVDN SGMCKAGFAGDDAPR VFPSIVGRPRHQG VGMGQKDSYVGDE
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVM--VGMGQKDSYVGDE 58
Query: 252 AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANRE 431
AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANRE
Sbjct: 59 AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANRE 118
Query: 432 KMTQIMFETFNTPAMYRRHPSPCSXCTPSGRTTGIVLDSGDGVSHTVPIYEGYPLPHAIL 611
KMTQIMFETFNTPAMY + S SGRTTG+VLDSGDGV+HTVPIYEGY LPHAIL
Sbjct: 119 KMTQIMFETFNTPAMYVAIQAVLSLYA-SGRTTGVVLDSGDGVTHTVPIYEGYALPHAIL 177
Query: 612 R 614
R
Sbjct: 178 R 178
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 336 bits (825), Expect = 9e-93
Identities = 160/181 (88%), Positives = 164/181 (90%)
Frame = +3
Query: 72 MCDEEVAALVVDNXSGMCKAGFAGDDAPRTVFPSIVGRPRHQGGWGWVGMGQKDSYVGDE 251
MCD+EVAALVVDN SGMCKAGFAGDDAPR VFPSIVGRPRHQG VGMGQKDSYVGDE
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVM--VGMGQKDSYVGDE 58
Query: 252 AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANRE 431
AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANRE
Sbjct: 59 AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANRE 118
Query: 432 KMTQIMFETFNTPAMYRRHPSPCSXCTPSGRTTGIVLDSGDGVSHTVPIYEGYPLPHAIL 611
KMTQIMFETFNTPAMY + S SGRTTG+VLDSGDGV+HTVPIYEGY LPHAIL
Sbjct: 119 KMTQIMFETFNTPAMYVAIQAVLSLYA-SGRTTGVVLDSGDGVTHTVPIYEGYALPHAIL 177
Query: 612 R 614
R
Sbjct: 178 R 178
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 336 bits (825), Expect = 9e-93
Identities = 160/181 (88%), Positives = 164/181 (90%)
Frame = +3
Query: 72 MCDEEVAALVVDNXSGMCKAGFAGDDAPRTVFPSIVGRPRHQGGWGWVGMGQKDSYVGDE 251
MCD+EVAALVVDN SGMCKAGFAGDDAPR VFPSIVGRPRHQG VGMGQKDSYVGDE
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVM--VGMGQKDSYVGDE 58
Query: 252 AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANRE 431
AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANRE
Sbjct: 59 AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANRE 118
Query: 432 KMTQIMFETFNTPAMYRRHPSPCSXCTPSGRTTGIVLDSGDGVSHTVPIYEGYPLPHAIL 611
KMTQIMFETFNTPAMY + S SGRTTG+VLDSGDGV+HTVPIYEGY LPHAIL
Sbjct: 119 KMTQIMFETFNTPAMYVAIQAVLSLYA-SGRTTGVVLDSGDGVTHTVPIYEGYALPHAIL 177
Query: 612 R 614
R
Sbjct: 178 R 178
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 336 bits (825), Expect = 9e-93
Identities = 160/181 (88%), Positives = 164/181 (90%)
Frame = +3
Query: 72 MCDEEVAALVVDNXSGMCKAGFAGDDAPRTVFPSIVGRPRHQGGWGWVGMGQKDSYVGDE 251
MCD+EVAALVVDN SGMCKAGFAGDDAPR VFPSIVGRPRHQG VGMGQKDSYVGDE
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVM--VGMGQKDSYVGDE 58
Query: 252 AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANRE 431
AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANRE
Sbjct: 59 AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANRE 118
Query: 432 KMTQIMFETFNTPAMYRRHPSPCSXCTPSGRTTGIVLDSGDGVSHTVPIYEGYPLPHAIL 611
KMTQIMFETFNTPAMY + S SGRTTG+VLDSGDGV+HTVPIYEGY LPHAIL
Sbjct: 119 KMTQIMFETFNTPAMYVAIQAVLSLYA-SGRTTGVVLDSGDGVTHTVPIYEGYALPHAIL 177
Query: 612 R 614
R
Sbjct: 178 R 178
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 336 bits (825), Expect = 9e-93
Identities = 160/181 (88%), Positives = 164/181 (90%)
Frame = +3
Query: 72 MCDEEVAALVVDNXSGMCKAGFAGDDAPRTVFPSIVGRPRHQGGWGWVGMGQKDSYVGDE 251
MCD+EVAALVVDN SGMCKAGFAGDDAPR VFPSIVGRPRHQG VGMGQKDSYVGDE
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVM--VGMGQKDSYVGDE 58
Query: 252 AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANRE 431
AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANRE
Sbjct: 59 AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANRE 118
Query: 432 KMTQIMFETFNTPAMYRRHPSPCSXCTPSGRTTGIVLDSGDGVSHTVPIYEGYPLPHAIL 611
KMTQIMFETFNTPAMY + S SGRTTG+VLDSGDGV+HTVPIYEGY LPHAIL
Sbjct: 119 KMTQIMFETFNTPAMYVAIQAVLSLYA-SGRTTGVVLDSGDGVTHTVPIYEGYALPHAIL 177
Query: 612 R 614
R
Sbjct: 178 R 178
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 336 bits (825), Expect = 9e-93
Identities = 160/181 (88%), Positives = 164/181 (90%)
Frame = +3
Query: 72 MCDEEVAALVVDNXSGMCKAGFAGDDAPRTVFPSIVGRPRHQGGWGWVGMGQKDSYVGDE 251
MCD+EVAALVVDN SGMCKAGFAGDDAPR VFPSIVGRPRHQG VGMGQKDSYVGDE
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVM--VGMGQKDSYVGDE 58
Query: 252 AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANRE 431
AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANRE
Sbjct: 59 AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANRE 118
Query: 432 KMTQIMFETFNTPAMYRRHPSPCSXCTPSGRTTGIVLDSGDGVSHTVPIYEGYPLPHAIL 611
KMTQIMFETFNTPAMY + S SGRTTG+VLDSGDGV+HTVPIYEGY LPHAIL
Sbjct: 119 KMTQIMFETFNTPAMYVAIQAVLSLYA-SGRTTGVVLDSGDGVTHTVPIYEGYALPHAIL 177
Query: 612 R 614
R
Sbjct: 178 R 178
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 335 bits (823), Expect = 2e-92
Identities = 160/181 (88%), Positives = 164/181 (90%)
Frame = +3
Query: 72 MCDEEVAALVVDNXSGMCKAGFAGDDAPRTVFPSIVGRPRHQGGWGWVGMGQKDSYVGDE 251
MCD++VAALVVDN SGMCKAGFAGDDAPR VFPSIVGRPRHQG VGMGQKDSYVGDE
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVM--VGMGQKDSYVGDE 58
Query: 252 AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANRE 431
AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANRE
Sbjct: 59 AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANRE 118
Query: 432 KMTQIMFETFNTPAMYRRHPSPCSXCTPSGRTTGIVLDSGDGVSHTVPIYEGYPLPHAIL 611
KMTQIMFETFNTPAMY + S SGRTTGIVLDSGDGV+HTVPIYEGY LPHAIL
Sbjct: 119 KMTQIMFETFNTPAMYVAIQAVLSLYA-SGRTTGIVLDSGDGVTHTVPIYEGYALPHAIL 177
Query: 612 R 614
R
Sbjct: 178 R 178
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 333 bits (819), Expect = 5e-92
Identities = 158/181 (87%), Positives = 164/181 (90%)
Frame = +3
Query: 72 MCDEEVAALVVDNXSGMCKAGFAGDDAPRTVFPSIVGRPRHQGGWGWVGMGQKDSYVGDE 251
MCD++VAAL++DN SGMCKAGFAGDDAPR VFPSIVGRPRHQG VGMGQKDSYVGDE
Sbjct: 1 MCDDDVAALILDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVM--VGMGQKDSYVGDE 58
Query: 252 AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANRE 431
AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANRE
Sbjct: 59 AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANRE 118
Query: 432 KMTQIMFETFNTPAMYRRHPSPCSXCTPSGRTTGIVLDSGDGVSHTVPIYEGYPLPHAIL 611
KMTQIMFETFNTPAMY + S SGRTTGIVLDSGDGV+HTVPIYEGY LPHAIL
Sbjct: 119 KMTQIMFETFNTPAMYVAIQAVLSLYA-SGRTTGIVLDSGDGVTHTVPIYEGYALPHAIL 177
Query: 612 R 614
R
Sbjct: 178 R 178
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 325 bits (798), Expect = 2e-89
Identities = 154/179 (86%), Positives = 161/179 (89%)
Frame = +3
Query: 78 DEEVAALVVDNXSGMCKAGFAGDDAPRTVFPSIVGRPRHQGGWGWVGMGQKDSYVGDEAQ 257
+EE+AALVVDN SGMCKAGFAGDDAPR VFPSIVGRPRHQG VGMGQKDSYVGDEAQ
Sbjct: 2 EEEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVM--VGMGQKDSYVGDEAQ 59
Query: 258 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 437
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELR+APEEHPVLLTEAPLNPK+NREKM
Sbjct: 60 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKSNREKM 119
Query: 438 TQIMFETFNTPAMYRRHPSPCSXCTPSGRTTGIVLDSGDGVSHTVPIYEGYPLPHAILR 614
TQIMFETFNTPAMY + S SGRTTGIVLD+GDGV+HTVPIYEGY LPHAI R
Sbjct: 120 TQIMFETFNTPAMYVNIQAVLSLYA-SGRTTGIVLDTGDGVTHTVPIYEGYALPHAIQR 177
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 300 bits (736), Expect = 6e-82
Identities = 143/163 (87%), Positives = 147/163 (90%)
Frame = +3
Query: 126 KAGFAGDDAPRTVFPSIVGRPRHQGGWGWVGMGQKDSYVGDEAQSKRGILTLKYPIEHGI 305
+AGFAGDDAPR VFPSIVGRPRHQG VGMGQKDSYVGDEAQSKRGILTLKYPIEHGI
Sbjct: 5 RAGFAGDDAPRAVFPSIVGRPRHQGVM--VGMGQKDSYVGDEAQSKRGILTLKYPIEHGI 62
Query: 306 VTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYRR 485
VTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMY
Sbjct: 63 VTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVA 122
Query: 486 HPSPCSXCTPSGRTTGIVLDSGDGVSHTVPIYEGYPLPHAILR 614
+ S SGRTTG+VLDSGDGV+HTVPIYEGY LPHAILR
Sbjct: 123 IQAVLSLYA-SGRTTGVVLDSGDGVTHTVPIYEGYALPHAILR 164
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 256 bits (626), Expect = 1e-68
Identities = 120/134 (89%), Positives = 123/134 (91%)
Frame = +3
Query: 213 VGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVL 392
VGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVL
Sbjct: 2 VGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVL 61
Query: 393 LTEAPLNPKANREKMTQIMFETFNTPAMYRRHPSPCSXCTPSGRTTGIVLDSGDGVSHTV 572
LTEAPLNPKANREKMTQIMFETFNTPAMY + S SGRTTG+VLDSGDGV+HTV
Sbjct: 62 LTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYA-SGRTTGVVLDSGDGVTHTV 120
Query: 573 PIYEGYPLPHAILR 614
PIYEGY LPHAILR
Sbjct: 121 PIYEGYALPHAILR 134
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 194 bits (473), Expect = 4e-50
Identities = 90/174 (51%), Positives = 124/174 (71%), Gaps = 1/174 (0%)
Frame = +3
Query: 96 LVVDNXSGMCKAGFAGDDAPRTVFPSIVGRPRHQGGWGWVGMGQKDSYVGDEAQSKRGIL 275
+V+DN SG+ KAGFAG+ P+ F + VGRP++ G D ++G +A+S RG+
Sbjct: 11 VVIDNGSGVIKAGFAGEQQPKVRFANFVGRPKYHRVMA--GGLDGDIFIGPKAESNRGLF 68
Query: 276 TLKYPIEHGIVTNWDDMEKIWHHTF-YNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF 452
+++YP+EHGIV NW DMEKIW + F ++L++ PEEHPVLLT+APLNP NRE+ +I F
Sbjct: 69 SIEYPMEHGIVNNWSDMEKIWEYIFGQDQLKIFPEEHPVLLTDAPLNPLKNRERSAEIFF 128
Query: 453 ETFNTPAMYRRHPSPCSXCTPSGRTTGIVLDSGDGVSHTVPIYEGYPLPHAILR 614
ETFN PA+Y + + S +GRTTG+VLDSGDGV+H VPI +G+ + HAI R
Sbjct: 129 ETFNVPALYIQMQAVLSLYA-TGRTTGVVLDSGDGVTHAVPIVKGFAMKHAIQR 181
>J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene III, 5' end. ).
Length = 86
Score = 171 bits (417), Expect = 3e-43
Identities = 81/88 (92%), Positives = 82/88 (93%)
Frame = +3
Query: 72 MCDEEVAALVVDNXSGMCKAGFAGDDAPRTVFPSIVGRPRHQGGWGWVGMGQKDSYVGDE 251
MCD+EVAALVVDN SGMCKAGFAGDDAPR VFPSIVGRPRHQG VGMGQKDSYVGDE
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVM--VGMGQKDSYVGDE 58
Query: 252 AQSKRGILTLKYPIEHGIVTNWDDMEKI 335
AQSKRGILTLKYPIEHGIVTNWDDMEKI
Sbjct: 59 AQSKRGILTLKYPIEHGIVTNWDDMEKI 86
>J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene I, 5' end. ).
Length = 86
Score = 171 bits (417), Expect = 3e-43
Identities = 81/88 (92%), Positives = 82/88 (93%)
Frame = +3
Query: 72 MCDEEVAALVVDNXSGMCKAGFAGDDAPRTVFPSIVGRPRHQGGWGWVGMGQKDSYVGDE 251
MCD+EVAALVVDN SGMCKAGFAGDDAPR VFPSIVGRPRHQG VGMGQKDSYVGDE
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVM--VGMGQKDSYVGDE 58
Query: 252 AQSKRGILTLKYPIEHGIVTNWDDMEKI 335
AQSKRGILTLKYPIEHGIVTNWDDMEKI
Sbjct: 59 AQSKRGILTLKYPIEHGIVTNWDDMEKI 86
>J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene IV, 5' end. ).
Length = 86
Score = 170 bits (414), Expect = 6e-43
Identities = 80/88 (90%), Positives = 82/88 (93%)
Frame = +3
Query: 72 MCDEEVAALVVDNXSGMCKAGFAGDDAPRTVFPSIVGRPRHQGGWGWVGMGQKDSYVGDE 251
MCD++VAALVVDN SGMCKAGFAGDDAPR VFPSIVGRPRHQG VGMGQKDSYVGDE
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVM--VGMGQKDSYVGDE 58
Query: 252 AQSKRGILTLKYPIEHGIVTNWDDMEKI 335
AQSKRGILTLKYPIEHGIVTNWDDMEKI
Sbjct: 59 AQSKRGILTLKYPIEHGIVTNWDDMEKI 86
>J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene II, 5' end. ).
Length = 83
Score = 165 bits (400), Expect = 3e-41
Identities = 77/85 (90%), Positives = 79/85 (92%)
Frame = +3
Query: 72 MCDEEVAALVVDNXSGMCKAGFAGDDAPRTVFPSIVGRPRHQGGWGWVGMGQKDSYVGDE 251
MCD++VAALVVDN SGMCKAGFAGDDAPR VFPSIVGRPRHQG VGMGQKDSYVGDE
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG--VMVGMGQKDSYVGDE 58
Query: 252 AQSKRGILTLKYPIEHGIVTNWDDM 326
AQSKRGILTLKYPIEHGIVTNWDDM
Sbjct: 59 AQSKRGILTLKYPIEHGIVTNWDDM 83
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical
protein K07C5.1 protein.
Length = 395
Score = 157 bits (380), Expect = 8e-39
Identities = 78/174 (44%), Positives = 108/174 (62%), Gaps = 1/174 (0%)
Frame = +3
Query: 96 LVVDNXSGMCKAGFAGDDAPRTVFPSIVGRPRHQGGWGWVGMGQKDSYVGDEAQSKRGIL 275
+VVDN +G K G+AG + P +FPS+VGRP + + KD VG+E R +L
Sbjct: 9 IVVDNGTGFVKCGYAGTNFPAHIFPSMVGRPIVRSTQRVGNIEIKDLMVGEECSQLRQML 68
Query: 276 TLKYPIEHGIVTNWDDMEKIWHHTFYNE-LRVAPEEHPVLLTEAPLNPKANREKMTQIMF 452
+ YP+++GIV NWDDM +W HTF E L + P+E +LLTE PLNP +NREKM Q+MF
Sbjct: 69 DINYPMDNGIVRNWDDMAHVWDHTFGPEKLDIDPKECKLLLTEPPLNPNSNREKMFQVMF 128
Query: 453 ETFNTPAMYRRHPSPCSXCTPSGRTTGIVLDSGDGVSHTVPIYEGYPLPHAILR 614
E + ++Y + + G TG+V+DSGDGV+H P+YEG+ L H R
Sbjct: 129 EQYGFNSIYVAVQAVLTLYA-QGLLTGVVVDSGDGVTHICPVYEGFALHHLTRR 181
>AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex
component protein 1 protein.
Length = 425
Score = 130 bits (315), Expect = 6e-31
Identities = 72/197 (36%), Positives = 102/197 (51%), Gaps = 18/197 (9%)
Frame = +3
Query: 72 MCDEEVAALVVDNXSGMCKAGFAGDDAPRTVFPSIVG-----RPRHQGGWGW-----VGM 221
M ++ A V+DN +G K G+AG+ P+ + PS + + W G+
Sbjct: 1 MSAHQLPACVIDNGTGYTKLGYAGNTEPQFIIPSAIAVKDKVASSNSQAMRWNNRVGAGI 60
Query: 222 GQKDSYVGDEAQSKRGI-LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLT 398
D ++GDEA S T+KYPI HGIV +WD ME+ W + LR PE+H LLT
Sbjct: 61 DDLDFFIGDEALSPAATNYTVKYPIRHGIVEDWDLMERYWEQCIFKYLRAEPEDHFFLLT 120
Query: 399 EAPLNPKANREKMTQIMFETFNTPAMYRRHPSPCSXCTP-------SGRTTGIVLDSGDG 557
E PLN NRE +IMFE+FN P +Y + + TG+V+DSGDG
Sbjct: 121 EPPLNTPENREYTAEIMFESFNVPGLYIAVQAVLALTASWNSREANERSLTGLVIDSGDG 180
Query: 558 VSHTVPIYEGYPLPHAI 608
V+H +P+ +GY + I
Sbjct: 181 VTHCIPVADGYVIGSCI 197
>AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical
protein ZK616.4 protein.
Length = 436
Score = 102 bits (244), Expect = 2e-22
Identities = 62/193 (32%), Positives = 101/193 (52%), Gaps = 15/193 (7%)
Frame = +3
Query: 81 EEVAALVVDNXSGMCKAGFAGDDAPRTVFPSIVG-------------RPRHQGGWGWVGM 221
+EV+ LV D S + GFAG++ P+ PS + +G V
Sbjct: 9 DEVSGLVFDAGSQSFRVGFAGEEYPKGDIPSYIAVQEALPDDTIEKQEAMEEGDNSKVQT 68
Query: 222 G-QKDSYVGD-EAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLL 395
+K+ ++G + R ++ ++ G++ +W+ EKI H++ N L P EHPVL
Sbjct: 69 KREKNFFIGTTKIIVPRARTNMESFMKEGLIEDWELFEKIVEHSYENILYSNPSEHPVLF 128
Query: 396 TEAPLNPKANREKMTQIMFETFNTPAMYRRHPSPCSXCTPSGRTTGIVLDSGDGVSHTVP 575
+E+ N +A REK+T+IMFE F PA Y S C GRT G+++DSG + VP
Sbjct: 129 SESSWNDRARREKLTEIMFEKFQVPAYYLSKNVVLS-CFAQGRTHGLMVDSGATQTSVVP 187
Query: 576 IYEGYPLPHAILR 614
+++GY + HA+++
Sbjct: 188 VFDGYAVTHAVVK 200
>Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical
protein C08B11.6 protein.
Length = 418
Score = 46.0 bits (104), Expect = 2e-05
Identities = 41/179 (22%), Positives = 75/179 (41%), Gaps = 3/179 (1%)
Frame = +3
Query: 87 VAALVVDNXSGMCKAGFAGDDAPRTVFPSIVGRPRHQGGWGWVGMGQKDSYVGDEAQSKR 266
+ ++ DN K G ++PR V SIV + +H+ +V Q +E K
Sbjct: 3 LTTIIFDNGGHNMKIGTIDSESPRLVPNSIV-KAKHEKKRVFVAHEQ------EECSDKF 55
Query: 267 GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 446
+ ++ PIE G V NWD ++IW TF + V + LT+ A + ++I
Sbjct: 56 SLFYVR-PIERGYVVNWDTQQQIWEKTF-GSMDVEASTSRIALTDNNYLIPALPDVSSEI 113
Query: 447 MFETFNTPAMYRRHPSPC---SXCTPSGRTTGIVLDSGDGVSHTVPIYEGYPLPHAILR 614
+F+ F +++ S + +V+DSG + G + +++R
Sbjct: 114 LFDYFGFTEVHKTSASTLVAKHSNKINNEKCAVVVDSGFSWTTVASFVNGMLIQDSVIR 172
>U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related
protein-like protein.
Length = 418
Score = 46.0 bits (104), Expect = 2e-05
Identities = 41/179 (22%), Positives = 75/179 (41%), Gaps = 3/179 (1%)
Frame = +3
Query: 87 VAALVVDNXSGMCKAGFAGDDAPRTVFPSIVGRPRHQGGWGWVGMGQKDSYVGDEAQSKR 266
+ ++ DN K G ++PR V SIV + +H+ +V Q +E K
Sbjct: 3 LTTIIFDNGGHNMKIGTIDSESPRLVPNSIV-KAKHEKKRVFVAHEQ------EECSDKF 55
Query: 267 GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 446
+ ++ PIE G V NWD ++IW TF + V + LT+ A + ++I
Sbjct: 56 SLFYVR-PIERGYVVNWDTQQQIWEKTF-GSMDVEASTSRIALTDNNYLIPALPDVSSEI 113
Query: 447 MFETFNTPAMYRRHPSPC---SXCTPSGRTTGIVLDSGDGVSHTVPIYEGYPLPHAILR 614
+F+ F +++ S + +V+DSG + G + +++R
Sbjct: 114 LFDYFGFTEVHKTSASTLVAKHSNKINNEKCAVVVDSGFSWTTVASFVNGMLIQDSVIR 172
>AL132943-5|CAB81977.1| 367|Caenorhabditis elegans Hypothetical
protein Y116F11B.8 protein.
Length = 367
Score = 29.5 bits (63), Expect = 2.0
Identities = 36/151 (23%), Positives = 54/151 (35%), Gaps = 2/151 (1%)
Frame = +3
Query: 102 VDNXSGMCKAGFAGDDAPRTVFPSI--VGRPRHQGGWGWVGMGQKDSYVGDEAQSKRGIL 275
+ N + + G ++A R P+ V P+ Q + W G+ K SYV K G
Sbjct: 88 LSNLTKLALLGLTFEEAIRKARPTFFEVLFPQ-QRYFSWSGIESKVSYVYKNKTLKMGFA 146
Query: 276 TLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFE 455
P+ + NW + K V P P L T A + +A +T +
Sbjct: 147 CYVGPLNRSEIINWSN--KTQQKRCKERCLVQPTRKPSLKTSAATS-RATDAPVTSLPPP 203
Query: 456 TFNTPAMYRRHPSPCSXCTPSGRTTGIVLDS 548
T + P S T S TT + S
Sbjct: 204 TDPPSTLGPMETPPNSPGTSSAATTSAPVTS 234
>AF099923-3|AAN63403.1| 784|Caenorhabditis elegans Ferm domain
(protein4.1-ezrin-radixin-moesin) family protein 8,
isoform c protein.
Length = 784
Score = 29.5 bits (63), Expect = 2.0
Identities = 23/80 (28%), Positives = 38/80 (47%), Gaps = 3/80 (3%)
Frame = +3
Query: 201 GWGWVGMGQKDS---YVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA 371
G+G+V GQ + +V E S G+L Y + + N DM+ N +R A
Sbjct: 105 GFGFVAAGQLPTIIQFVSPEGPSD-GLL---YANDQILEVNGLDMQNETKDNVVNAVRAA 160
Query: 372 PEEHPVLLTEAPLNPKANRE 431
EE + + + P PK++R+
Sbjct: 161 KEELQITVQQLPQRPKSSRK 180
>AF099923-2|AAM48544.1| 814|Caenorhabditis elegans Ferm domain
(protein4.1-ezrin-radixin-moesin) family protein 8,
isoform a protein.
Length = 814
Score = 29.5 bits (63), Expect = 2.0
Identities = 23/80 (28%), Positives = 38/80 (47%), Gaps = 3/80 (3%)
Frame = +3
Query: 201 GWGWVGMGQKDS---YVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA 371
G+G+V GQ + +V E S G+L Y + + N DM+ N +R A
Sbjct: 105 GFGFVAAGQLPTIIQFVSPEGPSD-GLL---YANDQILEVNGLDMQNETKDNVVNAVRAA 160
Query: 372 PEEHPVLLTEAPLNPKANRE 431
EE + + + P PK++R+
Sbjct: 161 KEELQITVQQLPQRPKSSRK 180
>AF099923-1|AAM48545.1| 853|Caenorhabditis elegans Ferm domain
(protein4.1-ezrin-radixin-moesin) family protein 8,
isoform b protein.
Length = 853
Score = 29.5 bits (63), Expect = 2.0
Identities = 23/80 (28%), Positives = 38/80 (47%), Gaps = 3/80 (3%)
Frame = +3
Query: 201 GWGWVGMGQKDS---YVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA 371
G+G+V GQ + +V E S G+L Y + + N DM+ N +R A
Sbjct: 144 GFGFVAAGQLPTIIQFVSPEGPSD-GLL---YANDQILEVNGLDMQNETKDNVVNAVRAA 199
Query: 372 PEEHPVLLTEAPLNPKANRE 431
EE + + + P PK++R+
Sbjct: 200 KEELQITVQQLPQRPKSSRK 219
>Z81047-2|CAB02828.1| 376|Caenorhabditis elegans Hypothetical
protein C41G6.3 protein.
Length = 376
Score = 28.3 bits (60), Expect = 4.6
Identities = 12/37 (32%), Positives = 19/37 (51%)
Frame = +3
Query: 105 DNXSGMCKAGFAGDDAPRTVFPSIVGRPRHQGGWGWV 215
DN + +CK+ F PR V + V P+ WG++
Sbjct: 195 DNANEICKSMFESFITPRYVLATPVNLPKLMSTWGFI 231
>U46675-7|AAB52641.1| 1274|Caenorhabditis elegans Hypothetical
protein F35A5.1 protein.
Length = 1274
Score = 28.3 bits (60), Expect = 4.6
Identities = 18/62 (29%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
Frame = +2
Query: 431 EDDPDHVRNIQHARHVPSPSKPVLSLYAVRSYHRYRAGLRRRCLPHRAHLRGI-PTPPRH 607
EDD V +++ A VP+ PVL + + R ++ P + H + PTP ++
Sbjct: 148 EDDEVDVEDVKDAPTVPAKKTPVLKKKEPAAAAKPRDPSPKKAAPSKEHDPIVPPTPIKN 207
Query: 608 PA 613
PA
Sbjct: 208 PA 209
>AF003147-1|AAB54205.2| 569|Caenorhabditis elegans Hypothetical
protein C11D9.1 protein.
Length = 569
Score = 27.9 bits (59), Expect = 6.1
Identities = 15/33 (45%), Positives = 18/33 (54%), Gaps = 2/33 (6%)
Frame = +2
Query: 410 QPQGQQREDDPDHV--RNIQHARHVPSPSKPVL 502
QPQ QQ+ PDHV N H +P+KP L
Sbjct: 48 QPQQQQQYHPPDHVTTHNGTTTFHTTNPTKPRL 80
>AC006701-1|AAM97962.1| 327|Caenorhabditis elegans Hypothetical
protein Y104H12D.2 protein.
Length = 327
Score = 27.9 bits (59), Expect = 6.1
Identities = 13/43 (30%), Positives = 21/43 (48%)
Frame = +3
Query: 201 GWGWVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDME 329
G WV + +V +E + K + T + I G+V D+ME
Sbjct: 156 GCKWVAVEAVKHFVVEENEEKEAVATGEVKISWGVVVEVDEME 198
>Z75955-5|CAB00119.2| 285|Caenorhabditis elegans Hypothetical
protein R07B7.10 protein.
Length = 285
Score = 27.5 bits (58), Expect = 8.1
Identities = 13/44 (29%), Positives = 27/44 (61%)
Frame = -2
Query: 562 ETPSPESSTIPVVRPDGVQXEHGLGWRRYMAGVLNVSNMIWVIF 431
+T SP+ T+ + R DG++ + GW + G + V+ +I+V++
Sbjct: 235 KTLSPKEMTLKIYREDGLRAFYRGGWAISLRGFV-VNAVIFVVY 277
>AL132864-1|CAB63392.1| 613|Caenorhabditis elegans Hypothetical
protein Y53H1A.1 protein.
Length = 613
Score = 27.5 bits (58), Expect = 8.1
Identities = 14/41 (34%), Positives = 16/41 (39%)
Frame = +2
Query: 374 RGTPRPAY*GSPQPQGQQREDDPDHVRNIQHARHVPSPSKP 496
RG P PA+ G P G + P H H P P P
Sbjct: 111 RGAPPPAHHGHFGPPGHHFQGPPQHFPPGPPRPHFPGPPGP 151
>AF025453-5|AAY55851.1| 279|Caenorhabditis elegans Hypothetical
protein C08F1.11 protein.
Length = 279
Score = 27.5 bits (58), Expect = 8.1
Identities = 12/38 (31%), Positives = 18/38 (47%)
Frame = +3
Query: 93 ALVVDNXSGMCKAGFAGDDAPRTVFPSIVGRPRHQGGW 206
AL N KA + G D P+ F I+G ++G +
Sbjct: 33 ALGTINCFHFIKASYLGHDTPQATFREIIGNKEYRGNF 70
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,157,970
Number of Sequences: 27780
Number of extensions: 408349
Number of successful extensions: 1472
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 1270
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1435
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1332243108
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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