Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--2002
         (596 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF263515-1|AAF74207.1|  126|Tribolium castaneum cytochrome P450 ...    25   0.64 
DQ855494-1|ABH88181.1|   99|Tribolium castaneum chemosensory pro...    23   2.6  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   6.0  
Z69735-1|CAA93623.1|  162|Tribolium castaneum initiation factor ...    21   7.9  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    21   7.9  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    21   7.9  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    21   7.9  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    21   7.9  

>AF263515-1|AAF74207.1|  126|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 126

 Score = 24.6 bits (51), Expect = 0.64
 Identities = 17/65 (26%), Positives = 29/65 (44%)
 Frame = +2

Query: 68  ILYLLNHRGGEELTTQEATDIFFATTKLFQSKDVVLRRLVYLCIKELSPMAQDVIIVTSS 247
           ++ L NH   +E   QE  D+   T K     D+   + +   IKE+  +   V  ++  
Sbjct: 9   LMVLANHPTVQEEIVQEMKDVLGDTKKKPVYNDLQELKYMERVIKEVLRLYPSVHYISRE 68

Query: 248 LTKDM 262
           L +DM
Sbjct: 69  LGEDM 73


>DQ855494-1|ABH88181.1|   99|Tribolium castaneum chemosensory
           protein 8 protein.
          Length = 99

 Score = 22.6 bits (46), Expect = 2.6
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = -2

Query: 334 QHCTVCDATQSSNGGRSVLIVFTRH 260
           ++C  CD+ Q +N  R    V T+H
Sbjct: 62  KNCERCDSRQVANARRIARYVQTKH 86


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.4 bits (43), Expect = 6.0
 Identities = 11/40 (27%), Positives = 18/40 (45%)
 Frame = -1

Query: 563  SFTVEINRCVLPQQQQPRHGKNPSHDLKSWPPVLSFIQRR 444
            SF V +N  ++PQ   P    NP   +  W   +  + R+
Sbjct: 1220 SFYVCVNGHLVPQNCAPGLHYNPEEHMCDWKYKVKCVGRK 1259


>Z69735-1|CAA93623.1|  162|Tribolium castaneum initiation factor
           5-like protein protein.
          Length = 162

 Score = 21.0 bits (42), Expect = 7.9
 Identities = 10/25 (40%), Positives = 13/25 (52%)
 Frame = +1

Query: 514 GCCCWGKTQRLISTVKLITKLARNP 588
           GC   G    L S  KL+T + +NP
Sbjct: 35  GCKACGYHSPLESNHKLVTFILKNP 59


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 7.9
 Identities = 9/33 (27%), Positives = 18/33 (54%)
 Frame = +2

Query: 2   QEARYFNSTPLHPRKCIHILTKILYLLNHRGGE 100
           +++RYF    +   KC+     +L++L  + GE
Sbjct: 292 EQSRYFIYMFVSVWKCLLFFVSVLFILLVKEGE 324


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 7.9
 Identities = 9/33 (27%), Positives = 18/33 (54%)
 Frame = +2

Query: 2   QEARYFNSTPLHPRKCIHILTKILYLLNHRGGE 100
           +++RYF    +   KC+     +L++L  + GE
Sbjct: 292 EQSRYFIYMFVSVWKCLLFFVSVLFILLVKEGE 324


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 7.9
 Identities = 9/33 (27%), Positives = 18/33 (54%)
 Frame = +2

Query: 2   QEARYFNSTPLHPRKCIHILTKILYLLNHRGGE 100
           +++RYF    +   KC+     +L++L  + GE
Sbjct: 292 EQSRYFIYMFVSVWKCLLFFVSVLFILLVKEGE 324


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 7.9
 Identities = 9/33 (27%), Positives = 18/33 (54%)
 Frame = +2

Query: 2   QEARYFNSTPLHPRKCIHILTKILYLLNHRGGE 100
           +++RYF    +   KC+     +L++L  + GE
Sbjct: 292 EQSRYFIYMFVSVWKCLLFFVSVLFILLVKEGE 324


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 142,645
Number of Sequences: 336
Number of extensions: 2967
Number of successful extensions: 19
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15039504
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)