Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--2002
(596 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC066650-1|AAH66650.1| 874|Homo sapiens coatomer protein comple... 204 1e-52
AF100756-1|AAD43020.1| 874|Homo sapiens coat protein gamma-cop ... 204 1e-52
AB047846-1|BAB17657.1| 874|Homo sapiens gamma1-COP protein. 204 1e-52
BC110796-1|AAI10797.1| 726|Homo sapiens COPG2 protein protein. 198 2e-50
BC017443-1|AAH17443.2| 865|Homo sapiens COPG2 protein protein. 198 2e-50
AF207598-1|AAF19433.1| 871|Homo sapiens coat protein gamma2-COP... 198 2e-50
AF157833-1|AAF14271.1| 871|Homo sapiens nonclathrin coat protei... 198 2e-50
AB047847-1|BAB17658.1| 871|Homo sapiens gamma2-COP protein. 198 2e-50
AK022934-1|BAB14315.1| 799|Homo sapiens protein ( Homo sapiens ... 135 1e-31
BC014146-1|AAH14146.1| 739|Homo sapiens adaptor-related protein... 41 0.003
AL137856-9|CAI19074.1| 262|Homo sapiens adaptor-related protein... 41 0.003
AL137856-5|CAI19072.1| 739|Homo sapiens adaptor-related protein... 41 0.003
AF092094-1|AAD20448.1| 739|Homo sapiens AP-4 adaptor complex be... 41 0.003
AB209817-1|BAD93054.1| 771|Homo sapiens adaptor-related protein... 41 0.003
U91931-1|AAD03778.1| 1093|Homo sapiens AP-3 complex beta3A subun... 38 0.020
U81504-1|AAB61638.1| 1094|Homo sapiens beta-3A-adaptin subunit o... 38 0.020
BC038444-1|AAH38444.1| 1094|Homo sapiens adaptor-related protein... 38 0.020
AY623424-1|AAT49048.1| 800|Homo sapiens adaptor-related protein... 38 0.020
U37673-1|AAC50219.1| 1081|Homo sapiens beta-NAP protein. 38 0.027
BC093739-1|AAH93739.1| 1082|Homo sapiens adaptor-related protein... 38 0.027
AF022152-1|AAB71894.1| 1082|Homo sapiens AP-3 complex beta3B sub... 38 0.027
BC020498-1|AAH20498.2| 699|Homo sapiens COPG protein protein. 34 0.33
U72395-1|AAB68948.1| 890|Homo sapiens MIP protein. 33 1.0
U72069-1|AAB58254.1| 890|Homo sapiens karyopherin beta2 protein. 33 1.0
U70322-1|AAC50723.1| 890|Homo sapiens transportin protein. 33 1.0
BC040340-1|AAH40340.1| 890|Homo sapiens transportin 1 protein. 33 1.0
BC072420-1|AAH72420.1| 887|Homo sapiens transportin 2 (importin... 32 1.8
AF007748-1|AAB71349.1| 887|Homo sapiens karyopherin beta2b homo... 32 1.8
AB210011-1|BAE06093.1| 1051|Homo sapiens TNPO2 variant protein p... 32 1.8
AY429749-1|AAR38528.1| 99|Homo sapiens immunoglobulin heavy ch... 30 5.4
>BC066650-1|AAH66650.1| 874|Homo sapiens coatomer protein complex,
subunit gamma protein.
Length = 874
Score = 204 bits (499), Expect = 1e-52
Identities = 109/181 (60%), Positives = 126/181 (69%)
Frame = +2
Query: 2 QEARYFNSTPLHPRKCIHILTKILYLLNHRGGEELTTQEATDIFFATTKLFQSKDVVLRR 181
QEAR FN TP++PRKC HILTKILYL+N GE L T EAT+ FFA TKLFQS D LRR
Sbjct: 29 QEARVFNETPINPRKCAHILTKILYLINQ--GEHLGTTEATEAFFAMTKLFQSNDPTLRR 86
Query: 182 LVYLCIKELSPMAQDVIIVTSSLTKDMTGKDDEYRPAAIRALCSITDSTMLQAIERYMKQ 361
+ YL IKE+S +A+DVIIVTSSLTKDMTGK+D YR A+RALC ITDSTMLQAIERYMKQ
Sbjct: 87 MCYLTIKEMSCIAEDVIIVTSSLTKDMTGKEDNYRGPAVRALCQITDSTMLQAIERYMKQ 146
Query: 362 AIVDKNPXXXXXXXXXXXXXXXPYRI*CVAG*MKAQEAMTSDHVMGSYHALAVVAGARRN 541
AIVDK P +AQEA +SD++M YHAL ++ R+N
Sbjct: 147 AIVDKVPSVSSSALVSSLHLLKCSFDVVKRWVNEAQEAASSDNIMVQYHALGLLYHVRKN 206
Query: 542 D 544
D
Sbjct: 207 D 207
>AF100756-1|AAD43020.1| 874|Homo sapiens coat protein gamma-cop
protein.
Length = 874
Score = 204 bits (499), Expect = 1e-52
Identities = 109/181 (60%), Positives = 126/181 (69%)
Frame = +2
Query: 2 QEARYFNSTPLHPRKCIHILTKILYLLNHRGGEELTTQEATDIFFATTKLFQSKDVVLRR 181
QEAR FN TP++PRKC HILTKILYL+N GE L T EAT+ FFA TKLFQS D LRR
Sbjct: 29 QEARVFNETPINPRKCAHILTKILYLINQ--GEHLGTTEATEAFFAMTKLFQSNDPTLRR 86
Query: 182 LVYLCIKELSPMAQDVIIVTSSLTKDMTGKDDEYRPAAIRALCSITDSTMLQAIERYMKQ 361
+ YL IKE+S +A+DVIIVTSSLTKDMTGK+D YR A+RALC ITDSTMLQAIERYMKQ
Sbjct: 87 MCYLTIKEMSCIAEDVIIVTSSLTKDMTGKEDNYRGPAVRALCQITDSTMLQAIERYMKQ 146
Query: 362 AIVDKNPXXXXXXXXXXXXXXXPYRI*CVAG*MKAQEAMTSDHVMGSYHALAVVAGARRN 541
AIVDK P +AQEA +SD++M YHAL ++ R+N
Sbjct: 147 AIVDKVPSVSSSALVSSLHLLKCSFDVVKRWVNEAQEAASSDNIMVQYHALGLLYHVRKN 206
Query: 542 D 544
D
Sbjct: 207 D 207
>AB047846-1|BAB17657.1| 874|Homo sapiens gamma1-COP protein.
Length = 874
Score = 204 bits (499), Expect = 1e-52
Identities = 109/181 (60%), Positives = 126/181 (69%)
Frame = +2
Query: 2 QEARYFNSTPLHPRKCIHILTKILYLLNHRGGEELTTQEATDIFFATTKLFQSKDVVLRR 181
QEAR FN TP++PRKC HILTKILYL+N GE L T EAT+ FFA TKLFQS D LRR
Sbjct: 29 QEARVFNETPINPRKCAHILTKILYLINQ--GEHLGTTEATEAFFAMTKLFQSNDPTLRR 86
Query: 182 LVYLCIKELSPMAQDVIIVTSSLTKDMTGKDDEYRPAAIRALCSITDSTMLQAIERYMKQ 361
+ YL IKE+S +A+DVIIVTSSLTKDMTGK+D YR A+RALC ITDSTMLQAIERYMKQ
Sbjct: 87 MCYLTIKEMSCIAEDVIIVTSSLTKDMTGKEDNYRGPAVRALCQITDSTMLQAIERYMKQ 146
Query: 362 AIVDKNPXXXXXXXXXXXXXXXPYRI*CVAG*MKAQEAMTSDHVMGSYHALAVVAGARRN 541
AIVDK P +AQEA +SD++M YHAL ++ R+N
Sbjct: 147 AIVDKVPSVSSSALVSSLHLLKCSFDVVKRWVNEAQEAASSDNIMVQYHALGLLYHVRKN 206
Query: 542 D 544
D
Sbjct: 207 D 207
>BC110796-1|AAI10797.1| 726|Homo sapiens COPG2 protein protein.
Length = 726
Score = 198 bits (482), Expect = 2e-50
Identities = 106/182 (58%), Positives = 127/182 (69%), Gaps = 1/182 (0%)
Frame = +2
Query: 2 QEARYFNSTPLHPRKCIHILTKILYLLNHRGGEELTTQEATDIFFATTKLFQSKDVVLRR 181
QEAR FN TP++PR+C+HILTKILYLLN GE T EAT+ FFA T+LFQS D LRR
Sbjct: 29 QEARIFNETPINPRRCLHILTKILYLLNQ--GEHFGTTEATEAFFAMTRLFQSNDQTLRR 86
Query: 182 LVYLCIKELSPMAQDVIIVTSSLTKDMTGKDDEYRPAAIRALCSITDSTMLQAIERYMKQ 361
+ YL IKE++ +++DVIIVTSSLTKDMTGK+D YR AIRALC ITD TMLQAIERYMKQ
Sbjct: 87 MCYLTIKEMATISEDVIIVTSSLTKDMTGKEDVYRGPAIRALCRITDGTMLQAIERYMKQ 146
Query: 362 AIVDK-NPXXXXXXXXXXXXXXXPYRI*CVAG*MKAQEAMTSDHVMGSYHALAVVAGARR 538
AIVDK + Y + +AQEA +SD++M YHAL V+ R+
Sbjct: 147 AIVDKVSSVSSSALVSSLHMMKISYDV-VKRWINEAQEAASSDNIMVQYHALGVLYHLRK 205
Query: 539 ND 544
ND
Sbjct: 206 ND 207
>BC017443-1|AAH17443.2| 865|Homo sapiens COPG2 protein protein.
Length = 865
Score = 198 bits (482), Expect = 2e-50
Identities = 106/182 (58%), Positives = 127/182 (69%), Gaps = 1/182 (0%)
Frame = +2
Query: 2 QEARYFNSTPLHPRKCIHILTKILYLLNHRGGEELTTQEATDIFFATTKLFQSKDVVLRR 181
QEAR FN TP++PR+C+HILTKILYLLN GE T EAT+ FFA T+LFQS D LRR
Sbjct: 23 QEARIFNETPINPRRCLHILTKILYLLNQ--GEHFGTTEATEAFFAMTRLFQSNDQTLRR 80
Query: 182 LVYLCIKELSPMAQDVIIVTSSLTKDMTGKDDEYRPAAIRALCSITDSTMLQAIERYMKQ 361
+ YL IKE++ +++DVIIVTSSLTKDMTGK+D YR AIRALC ITD TMLQAIERYMKQ
Sbjct: 81 MCYLTIKEMATISEDVIIVTSSLTKDMTGKEDVYRGPAIRALCRITDGTMLQAIERYMKQ 140
Query: 362 AIVDK-NPXXXXXXXXXXXXXXXPYRI*CVAG*MKAQEAMTSDHVMGSYHALAVVAGARR 538
AIVDK + Y + +AQEA +SD++M YHAL V+ R+
Sbjct: 141 AIVDKVSSVSSSALVSSLHMMKISYDV-VKRWINEAQEAASSDNIMVQYHALGVLYHLRK 199
Query: 539 ND 544
ND
Sbjct: 200 ND 201
>AF207598-1|AAF19433.1| 871|Homo sapiens coat protein gamma2-COP
protein.
Length = 871
Score = 198 bits (482), Expect = 2e-50
Identities = 106/182 (58%), Positives = 127/182 (69%), Gaps = 1/182 (0%)
Frame = +2
Query: 2 QEARYFNSTPLHPRKCIHILTKILYLLNHRGGEELTTQEATDIFFATTKLFQSKDVVLRR 181
QEAR FN TP++PR+C+HILTKILYLLN GE T EAT+ FFA T+LFQS D LRR
Sbjct: 29 QEARIFNETPINPRRCLHILTKILYLLNQ--GEHFGTTEATEAFFAMTRLFQSNDQTLRR 86
Query: 182 LVYLCIKELSPMAQDVIIVTSSLTKDMTGKDDEYRPAAIRALCSITDSTMLQAIERYMKQ 361
+ YL IKE++ +++DVIIVTSSLTKDMTGK+D YR AIRALC ITD TMLQAIERYMKQ
Sbjct: 87 MCYLTIKEMATISEDVIIVTSSLTKDMTGKEDVYRGPAIRALCRITDGTMLQAIERYMKQ 146
Query: 362 AIVDK-NPXXXXXXXXXXXXXXXPYRI*CVAG*MKAQEAMTSDHVMGSYHALAVVAGARR 538
AIVDK + Y + +AQEA +SD++M YHAL V+ R+
Sbjct: 147 AIVDKVSSVSSSALVSSLHMMKISYDV-VKRWINEAQEAASSDNIMVQYHALGVLYHLRK 205
Query: 539 ND 544
ND
Sbjct: 206 ND 207
>AF157833-1|AAF14271.1| 871|Homo sapiens nonclathrin coat protein
gamma2-COP protein.
Length = 871
Score = 198 bits (482), Expect = 2e-50
Identities = 106/182 (58%), Positives = 127/182 (69%), Gaps = 1/182 (0%)
Frame = +2
Query: 2 QEARYFNSTPLHPRKCIHILTKILYLLNHRGGEELTTQEATDIFFATTKLFQSKDVVLRR 181
QEAR FN TP++PR+C+HILTKILYLLN GE T EAT+ FFA T+LFQS D LRR
Sbjct: 29 QEARIFNETPINPRRCLHILTKILYLLNQ--GEHFGTTEATEAFFAMTRLFQSNDQTLRR 86
Query: 182 LVYLCIKELSPMAQDVIIVTSSLTKDMTGKDDEYRPAAIRALCSITDSTMLQAIERYMKQ 361
+ YL IKE++ +++DVIIVTSSLTKDMTGK+D YR AIRALC ITD TMLQAIERYMKQ
Sbjct: 87 MCYLTIKEMATISEDVIIVTSSLTKDMTGKEDVYRGPAIRALCRITDGTMLQAIERYMKQ 146
Query: 362 AIVDK-NPXXXXXXXXXXXXXXXPYRI*CVAG*MKAQEAMTSDHVMGSYHALAVVAGARR 538
AIVDK + Y + +AQEA +SD++M YHAL V+ R+
Sbjct: 147 AIVDKVSSVSSSALVSSLHMMKISYDV-VKRWINEAQEAASSDNIMVQYHALGVLYHLRK 205
Query: 539 ND 544
ND
Sbjct: 206 ND 207
>AB047847-1|BAB17658.1| 871|Homo sapiens gamma2-COP protein.
Length = 871
Score = 198 bits (482), Expect = 2e-50
Identities = 106/182 (58%), Positives = 127/182 (69%), Gaps = 1/182 (0%)
Frame = +2
Query: 2 QEARYFNSTPLHPRKCIHILTKILYLLNHRGGEELTTQEATDIFFATTKLFQSKDVVLRR 181
QEAR FN TP++PR+C+HILTKILYLLN GE T EAT+ FFA T+LFQS D LRR
Sbjct: 29 QEARIFNETPINPRRCLHILTKILYLLNQ--GEHFGTTEATEAFFAMTRLFQSNDQTLRR 86
Query: 182 LVYLCIKELSPMAQDVIIVTSSLTKDMTGKDDEYRPAAIRALCSITDSTMLQAIERYMKQ 361
+ YL IKE++ +++DVIIVTSSLTKDMTGK+D YR AIRALC ITD TMLQAIERYMKQ
Sbjct: 87 MCYLTIKEMATISEDVIIVTSSLTKDMTGKEDVYRGPAIRALCRITDGTMLQAIERYMKQ 146
Query: 362 AIVDK-NPXXXXXXXXXXXXXXXPYRI*CVAG*MKAQEAMTSDHVMGSYHALAVVAGARR 538
AIVDK + Y + +AQEA +SD++M YHAL V+ R+
Sbjct: 147 AIVDKVSSVSSSALVSSLHMMKISYDV-VKRWINEAQEAASSDNIMVQYHALGVLYHLRK 205
Query: 539 ND 544
ND
Sbjct: 206 ND 207
>AK022934-1|BAB14315.1| 799|Homo sapiens protein ( Homo sapiens
cDNA FLJ12872 fis, clone NT2RP2003760, highly similar to
COATOMER GAMMA SUBUNIT. ).
Length = 799
Score = 135 bits (327), Expect = 1e-31
Identities = 75/135 (55%), Positives = 91/135 (67%), Gaps = 1/135 (0%)
Frame = +2
Query: 143 TKLFQSKDVVLRRLVYLCIKELSPMAQDVIIVTSSLTKDMTGKDDEYRPAAIRALCSITD 322
T+LFQS D LRR+ YL IKE++ +++DVIIVTSSLTKDMTGK+D YR AIRALC ITD
Sbjct: 2 TRLFQSNDQTLRRMCYLTIKEMATISEDVIIVTSSLTKDMTGKEDVYRGPAIRALCRITD 61
Query: 323 STMLQAIERYMKQAIVDK-NPXXXXXXXXXXXXXXXPYRI*CVAG*MKAQEAMTSDHVMG 499
TMLQAIERYMKQAIVDK + Y + +AQEA +SD++M
Sbjct: 62 GTMLQAIERYMKQAIVDKVSSVSSSALVSSLHMMKISYDV-VKRWINEAQEAASSDNIMV 120
Query: 500 SYHALAVVAGARRND 544
YHAL V+ R+ND
Sbjct: 121 QYHALGVLYHLRKND 135
>BC014146-1|AAH14146.1| 739|Homo sapiens adaptor-related protein
complex 4, beta 1 subunit protein.
Length = 739
Score = 41.1 bits (92), Expect = 0.003
Identities = 21/87 (24%), Positives = 49/87 (56%), Gaps = 1/87 (1%)
Frame = +2
Query: 116 EATDIFFATTKLFQSKDVVLRRLVYLCIKELSPMAQDV-IIVTSSLTKDMTGKDDEYRPA 292
+ + +F K + D+V ++LVYL + +P+ D+ ++ ++L KD + + R
Sbjct: 45 DMSGVFMEMVKASATVDIVQKKLVYLYMCTYAPLKPDLALLAINTLCKDCSDPNPMVRGL 104
Query: 293 AIRALCSITDSTMLQAIERYMKQAIVD 373
A+R++CS+ + ++ Y++Q I++
Sbjct: 105 ALRSMCSL----RMPGVQEYIQQPILN 127
>AL137856-9|CAI19074.1| 262|Homo sapiens adaptor-related protein
complex 4, beta 1 subunit protein.
Length = 262
Score = 41.1 bits (92), Expect = 0.003
Identities = 21/87 (24%), Positives = 49/87 (56%), Gaps = 1/87 (1%)
Frame = +2
Query: 116 EATDIFFATTKLFQSKDVVLRRLVYLCIKELSPMAQDV-IIVTSSLTKDMTGKDDEYRPA 292
+ + +F K + D+V ++LVYL + +P+ D+ ++ ++L KD + + R
Sbjct: 45 DMSGVFMEMVKASATVDIVQKKLVYLYMCTYAPLKPDLALLAINTLCKDCSDPNPMVRGL 104
Query: 293 AIRALCSITDSTMLQAIERYMKQAIVD 373
A+R++CS+ + ++ Y++Q I++
Sbjct: 105 ALRSMCSL----RMPGVQEYIQQPILN 127
>AL137856-5|CAI19072.1| 739|Homo sapiens adaptor-related protein
complex 4, beta 1 subunit protein.
Length = 739
Score = 41.1 bits (92), Expect = 0.003
Identities = 21/87 (24%), Positives = 49/87 (56%), Gaps = 1/87 (1%)
Frame = +2
Query: 116 EATDIFFATTKLFQSKDVVLRRLVYLCIKELSPMAQDV-IIVTSSLTKDMTGKDDEYRPA 292
+ + +F K + D+V ++LVYL + +P+ D+ ++ ++L KD + + R
Sbjct: 45 DMSGVFMEMVKASATVDIVQKKLVYLYMCTYAPLKPDLALLAINTLCKDCSDPNPMVRGL 104
Query: 293 AIRALCSITDSTMLQAIERYMKQAIVD 373
A+R++CS+ + ++ Y++Q I++
Sbjct: 105 ALRSMCSL----RMPGVQEYIQQPILN 127
>AF092094-1|AAD20448.1| 739|Homo sapiens AP-4 adaptor complex beta4
subunit protein.
Length = 739
Score = 41.1 bits (92), Expect = 0.003
Identities = 21/87 (24%), Positives = 49/87 (56%), Gaps = 1/87 (1%)
Frame = +2
Query: 116 EATDIFFATTKLFQSKDVVLRRLVYLCIKELSPMAQDV-IIVTSSLTKDMTGKDDEYRPA 292
+ + +F K + D+V ++LVYL + +P+ D+ ++ ++L KD + + R
Sbjct: 45 DMSGVFMEMVKASATVDIVQKKLVYLYMCTYAPLKPDLALLAINTLCKDCSDPNPMVRGL 104
Query: 293 AIRALCSITDSTMLQAIERYMKQAIVD 373
A+R++CS+ + ++ Y++Q I++
Sbjct: 105 ALRSMCSL----RMPGVQEYIQQPILN 127
>AB209817-1|BAD93054.1| 771|Homo sapiens adaptor-related protein
complex 4, beta 1 subunit variant protein.
Length = 771
Score = 41.1 bits (92), Expect = 0.003
Identities = 21/87 (24%), Positives = 49/87 (56%), Gaps = 1/87 (1%)
Frame = +2
Query: 116 EATDIFFATTKLFQSKDVVLRRLVYLCIKELSPMAQDV-IIVTSSLTKDMTGKDDEYRPA 292
+ + +F K + D+V ++LVYL + +P+ D+ ++ ++L KD + + R
Sbjct: 77 DMSGVFMEMVKASATVDIVQKKLVYLYMCTYAPLKPDLALLAINTLCKDCSDPNPMVRGL 136
Query: 293 AIRALCSITDSTMLQAIERYMKQAIVD 373
A+R++CS+ + ++ Y++Q I++
Sbjct: 137 ALRSMCSL----RMPGVQEYIQQPILN 159
>U91931-1|AAD03778.1| 1093|Homo sapiens AP-3 complex beta3A subunit
protein.
Length = 1093
Score = 38.3 bits (85), Expect = 0.020
Identities = 22/91 (24%), Positives = 50/91 (54%), Gaps = 1/91 (1%)
Frame = +2
Query: 113 QEATDIFFATTKLFQSKDVVLRRLVYLCIKELSPMAQDVIIVT-SSLTKDMTGKDDEYRP 289
+ A+++F A K SK++ +++LVY+ + + QD+ +++ S+ + + + R
Sbjct: 74 KNASELFPAVVKNVASKNIEIKKLVYVYLVRYAEEQQDLALLSISTFQRALKDPNQLIRA 133
Query: 290 AAIRALCSITDSTMLQAIERYMKQAIVDKNP 382
+A+R L SI ++ + +K+A D +P
Sbjct: 134 SALRVLSSIRVPIIVPIMMLAIKEASADLSP 164
>U81504-1|AAB61638.1| 1094|Homo sapiens beta-3A-adaptin subunit of
the AP-3 complex protein.
Length = 1094
Score = 38.3 bits (85), Expect = 0.020
Identities = 22/91 (24%), Positives = 50/91 (54%), Gaps = 1/91 (1%)
Frame = +2
Query: 113 QEATDIFFATTKLFQSKDVVLRRLVYLCIKELSPMAQDVIIVT-SSLTKDMTGKDDEYRP 289
+ A+++F A K SK++ +++LVY+ + + QD+ +++ S+ + + + R
Sbjct: 74 KNASELFPAVVKNVASKNIEIKKLVYVYLVRYAEEQQDLALLSISTFQRALKDPNQLIRA 133
Query: 290 AAIRALCSITDSTMLQAIERYMKQAIVDKNP 382
+A+R L SI ++ + +K+A D +P
Sbjct: 134 SALRVLSSIRVPIIVPIMMLAIKEASADLSP 164
>BC038444-1|AAH38444.1| 1094|Homo sapiens adaptor-related protein
complex 3, beta 1 subunit protein.
Length = 1094
Score = 38.3 bits (85), Expect = 0.020
Identities = 22/91 (24%), Positives = 50/91 (54%), Gaps = 1/91 (1%)
Frame = +2
Query: 113 QEATDIFFATTKLFQSKDVVLRRLVYLCIKELSPMAQDVIIVT-SSLTKDMTGKDDEYRP 289
+ A+++F A K SK++ +++LVY+ + + QD+ +++ S+ + + + R
Sbjct: 74 KNASELFPAVVKNVASKNIEIKKLVYVYLVRYAEEQQDLALLSISTFQRALKDPNQLIRA 133
Query: 290 AAIRALCSITDSTMLQAIERYMKQAIVDKNP 382
+A+R L SI ++ + +K+A D +P
Sbjct: 134 SALRVLSSIRVPIIVPIMMLAIKEASADLSP 164
>AY623424-1|AAT49048.1| 800|Homo sapiens adaptor-related protein
complex 3 beta 1 subunit protein.
Length = 800
Score = 38.3 bits (85), Expect = 0.020
Identities = 22/91 (24%), Positives = 50/91 (54%), Gaps = 1/91 (1%)
Frame = +2
Query: 113 QEATDIFFATTKLFQSKDVVLRRLVYLCIKELSPMAQDVIIVT-SSLTKDMTGKDDEYRP 289
+ A+++F A K SK++ +++LVY+ + + QD+ +++ S+ + + + R
Sbjct: 74 KNASELFPAVVKNVASKNIEIKKLVYVYLVRYAEEQQDLALLSISTFQRALKDPNQLIRA 133
Query: 290 AAIRALCSITDSTMLQAIERYMKQAIVDKNP 382
+A+R L SI ++ + +K+A D +P
Sbjct: 134 SALRVLSSIRVPIIVPIMMLAIKEASADLSP 164
>U37673-1|AAC50219.1| 1081|Homo sapiens beta-NAP protein.
Length = 1081
Score = 37.9 bits (84), Expect = 0.027
Identities = 22/91 (24%), Positives = 49/91 (53%), Gaps = 1/91 (1%)
Frame = +2
Query: 113 QEATDIFFATTKLFQSKDVVLRRLVYLCIKELSPMAQDVIIVT-SSLTKDMTGKDDEYRP 289
+ A+D+F A K K++ +++LVY+ + + QD+ +++ S+ + + + R
Sbjct: 69 KNASDLFPAVVKNVACKNIEVKKLVYVYLVRYAEEQQDLALLSISTFQRGLKDPNQLIRA 128
Query: 290 AAIRALCSITDSTMLQAIERYMKQAIVDKNP 382
+A+R L SI ++ + +K+A D +P
Sbjct: 129 SALRVLSSIRVPIIVPIMMLAIKEAASDMSP 159
>BC093739-1|AAH93739.1| 1082|Homo sapiens adaptor-related protein
complex 3, beta 2 subunit protein.
Length = 1082
Score = 37.9 bits (84), Expect = 0.027
Identities = 22/91 (24%), Positives = 49/91 (53%), Gaps = 1/91 (1%)
Frame = +2
Query: 113 QEATDIFFATTKLFQSKDVVLRRLVYLCIKELSPMAQDVIIVT-SSLTKDMTGKDDEYRP 289
+ A+D+F A K K++ +++LVY+ + + QD+ +++ S+ + + + R
Sbjct: 69 KNASDLFPAVVKNVACKNIEVKKLVYVYLVRYAEEQQDLALLSISTFQRGLKDPNQLIRA 128
Query: 290 AAIRALCSITDSTMLQAIERYMKQAIVDKNP 382
+A+R L SI ++ + +K+A D +P
Sbjct: 129 SALRVLSSIRVPIIVPIMMLAIKEAASDMSP 159
>AF022152-1|AAB71894.1| 1082|Homo sapiens AP-3 complex beta3B
subunit protein.
Length = 1082
Score = 37.9 bits (84), Expect = 0.027
Identities = 22/91 (24%), Positives = 49/91 (53%), Gaps = 1/91 (1%)
Frame = +2
Query: 113 QEATDIFFATTKLFQSKDVVLRRLVYLCIKELSPMAQDVIIVT-SSLTKDMTGKDDEYRP 289
+ A+D+F A K K++ +++LVY+ + + QD+ +++ S+ + + + R
Sbjct: 69 KNASDLFPAVVKNVACKNIEVKKLVYVYLVRYAEEQQDLALLSISTFQRGLKDPNQLIRA 128
Query: 290 AAIRALCSITDSTMLQAIERYMKQAIVDKNP 382
+A+R L SI ++ + +K+A D +P
Sbjct: 129 SALRVLSSIRVPIIVPIMMLAIKEAASDMSP 159
>BC020498-1|AAH20498.2| 699|Homo sapiens COPG protein protein.
Length = 699
Score = 34.3 bits (75), Expect = 0.33
Identities = 14/28 (50%), Positives = 21/28 (75%)
Frame = +2
Query: 461 KAQEAMTSDHVMGSYHALAVVAGARRND 544
+AQEA +SD++M YHAL ++ R+ND
Sbjct: 5 EAQEAASSDNIMVQYHALGLLYHVRKND 32
>U72395-1|AAB68948.1| 890|Homo sapiens MIP protein.
Length = 890
Score = 32.7 bits (71), Expect = 1.0
Identities = 15/56 (26%), Positives = 34/56 (60%)
Frame = +2
Query: 149 LFQSKDVVLRRLVYLCIKELSPMAQDVIIVTSSLTKDMTGKDDEYRPAAIRALCSI 316
L ++ + + RL Y+C +E++PM Q I + +++ +D+E + +A R +C++
Sbjct: 767 LLENTAITIGRLGYVCPQEVAPMLQQFIRPWCTSLRNI--RDNEEKDSAFRGICTM 820
>U72069-1|AAB58254.1| 890|Homo sapiens karyopherin beta2 protein.
Length = 890
Score = 32.7 bits (71), Expect = 1.0
Identities = 15/56 (26%), Positives = 34/56 (60%)
Frame = +2
Query: 149 LFQSKDVVLRRLVYLCIKELSPMAQDVIIVTSSLTKDMTGKDDEYRPAAIRALCSI 316
L ++ + + RL Y+C +E++PM Q I + +++ +D+E + +A R +C++
Sbjct: 767 LLENTAITIGRLGYVCPQEVAPMLQQFIRPWCTSLRNI--RDNEEKDSAFRGICTM 820
>U70322-1|AAC50723.1| 890|Homo sapiens transportin protein.
Length = 890
Score = 32.7 bits (71), Expect = 1.0
Identities = 15/56 (26%), Positives = 34/56 (60%)
Frame = +2
Query: 149 LFQSKDVVLRRLVYLCIKELSPMAQDVIIVTSSLTKDMTGKDDEYRPAAIRALCSI 316
L ++ + + RL Y+C +E++PM Q I + +++ +D+E + +A R +C++
Sbjct: 767 LLENTAITIGRLGYVCPQEVAPMLQQFIRPWCTSLRNI--RDNEEKDSAFRGICTM 820
>BC040340-1|AAH40340.1| 890|Homo sapiens transportin 1 protein.
Length = 890
Score = 32.7 bits (71), Expect = 1.0
Identities = 15/56 (26%), Positives = 34/56 (60%)
Frame = +2
Query: 149 LFQSKDVVLRRLVYLCIKELSPMAQDVIIVTSSLTKDMTGKDDEYRPAAIRALCSI 316
L ++ + + RL Y+C +E++PM Q I + +++ +D+E + +A R +C++
Sbjct: 767 LLENTAITIGRLGYVCPQEVAPMLQQFIRPWCTSLRNI--RDNEEKDSAFRGICTM 820
>BC072420-1|AAH72420.1| 887|Homo sapiens transportin 2 (importin 3,
karyopherin beta 2b) protein.
Length = 887
Score = 31.9 bits (69), Expect = 1.8
Identities = 15/54 (27%), Positives = 32/54 (59%)
Frame = +2
Query: 149 LFQSKDVVLRRLVYLCIKELSPMAQDVIIVTSSLTKDMTGKDDEYRPAAIRALC 310
L ++ + + RL Y+C +E++PM Q I + +++ +D+E + +A R +C
Sbjct: 764 LLENTAITIGRLGYVCPQEVAPMLQQFIRPWCTSLRNI--RDNEEKDSAFRGIC 815
>AF007748-1|AAB71349.1| 887|Homo sapiens karyopherin beta2b homolog
protein.
Length = 887
Score = 31.9 bits (69), Expect = 1.8
Identities = 15/54 (27%), Positives = 32/54 (59%)
Frame = +2
Query: 149 LFQSKDVVLRRLVYLCIKELSPMAQDVIIVTSSLTKDMTGKDDEYRPAAIRALC 310
L ++ + + RL Y+C +E++PM Q I + +++ +D+E + +A R +C
Sbjct: 764 LLENTAITIGRLGYVCPQEVAPMLQQFIRPWCTSLRNI--RDNEEKDSAFRGIC 815
>AB210011-1|BAE06093.1| 1051|Homo sapiens TNPO2 variant protein
protein.
Length = 1051
Score = 31.9 bits (69), Expect = 1.8
Identities = 15/54 (27%), Positives = 32/54 (59%)
Frame = +2
Query: 149 LFQSKDVVLRRLVYLCIKELSPMAQDVIIVTSSLTKDMTGKDDEYRPAAIRALC 310
L ++ + + RL Y+C +E++PM Q I + +++ +D+E + +A R +C
Sbjct: 928 LLENTAITIGRLGYVCPQEVAPMLQQFIRPWCTSLRNI--RDNEEKDSAFRGIC 979
>AY429749-1|AAR38528.1| 99|Homo sapiens immunoglobulin heavy chain
variable region protein.
Length = 99
Score = 30.3 bits (65), Expect = 5.4
Identities = 17/68 (25%), Positives = 31/68 (45%)
Frame = +2
Query: 44 KCIHILTKILYLLNHRGGEELTTQEATDIFFATTKLFQSKDVVLRRLVYLCIKELSPMAQ 223
+ I IL Y +G +T ++T + +S+D VY C +E P+
Sbjct: 32 RIIPILGIANYAQKFQGRVTITADKSTSTAYMELSSLRSEDTA----VYYCAREYRPLGS 87
Query: 224 DVIIVTSS 247
V+++TS+
Sbjct: 88 GVVVITSA 95
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 88,158,862
Number of Sequences: 237096
Number of extensions: 1820738
Number of successful extensions: 3438
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 3309
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3430
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 6324506272
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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