Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--2002
(596 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z68880-8|CAJ43445.1| 883|Caenorhabditis elegans Hypothetical pr... 180 5e-46
Z68880-7|CAA93095.1| 870|Caenorhabditis elegans Hypothetical pr... 180 5e-46
AF067609-7|AAC17536.1| 162|Caenorhabditis elegans Hypothetical ... 28 4.4
AF067609-6|AAC17535.1| 203|Caenorhabditis elegans Hypothetical ... 28 4.4
Z96047-4|CAB09414.1| 796|Caenorhabditis elegans Hypothetical pr... 28 5.8
Z70268-5|CAJ85767.2| 1204|Caenorhabditis elegans Hypothetical pr... 28 5.8
Z70268-4|CAA94220.3| 1263|Caenorhabditis elegans Hypothetical pr... 28 5.8
AC006810-5|AAF59629.2| 516|Caenorhabditis elegans Cytochrome p4... 27 7.7
>Z68880-8|CAJ43445.1| 883|Caenorhabditis elegans Hypothetical
protein T14G10.5b protein.
Length = 883
Score = 180 bits (439), Expect = 5e-46
Identities = 96/181 (53%), Positives = 121/181 (66%)
Frame = +2
Query: 2 QEARYFNSTPLHPRKCIHILTKILYLLNHRGGEELTTQEATDIFFATTKLFQSKDVVLRR 181
QEAR FN TP++ RKC IL+K++Y++ GE + EAT+ FF TKL+QSKDV LRR
Sbjct: 38 QEARAFNETPINARKCCFILSKLIYIIQQ--GESIGRTEATEAFFGVTKLWQSKDVSLRR 95
Query: 182 LVYLCIKELSPMAQDVIIVTSSLTKDMTGKDDEYRPAAIRALCSITDSTMLQAIERYMKQ 361
+VYL +KEL+ ++ DVIIVTSSLTKDMTG++D YR AAIRALC ITD+ MLQ IERYMKQ
Sbjct: 96 MVYLAVKELAEVSDDVIIVTSSLTKDMTGREDLYRAAAIRALCKITDTGMLQTIERYMKQ 155
Query: 362 AIVDKNPXXXXXXXXXXXXXXXPYRI*CVAG*MKAQEAMTSDHVMGSYHALAVVAGARRN 541
AIVD+N + QEA++SD+ M YHALA++ R N
Sbjct: 156 AIVDRNSAISSSAIVSSIHLMRKSSEVVRRWANEVQEAVSSDNHMVQYHALALLYQIRAN 215
Query: 542 D 544
D
Sbjct: 216 D 216
>Z68880-7|CAA93095.1| 870|Caenorhabditis elegans Hypothetical
protein T14G10.5a protein.
Length = 870
Score = 180 bits (439), Expect = 5e-46
Identities = 96/181 (53%), Positives = 121/181 (66%)
Frame = +2
Query: 2 QEARYFNSTPLHPRKCIHILTKILYLLNHRGGEELTTQEATDIFFATTKLFQSKDVVLRR 181
QEAR FN TP++ RKC IL+K++Y++ GE + EAT+ FF TKL+QSKDV LRR
Sbjct: 25 QEARAFNETPINARKCCFILSKLIYIIQQ--GESIGRTEATEAFFGVTKLWQSKDVSLRR 82
Query: 182 LVYLCIKELSPMAQDVIIVTSSLTKDMTGKDDEYRPAAIRALCSITDSTMLQAIERYMKQ 361
+VYL +KEL+ ++ DVIIVTSSLTKDMTG++D YR AAIRALC ITD+ MLQ IERYMKQ
Sbjct: 83 MVYLAVKELAEVSDDVIIVTSSLTKDMTGREDLYRAAAIRALCKITDTGMLQTIERYMKQ 142
Query: 362 AIVDKNPXXXXXXXXXXXXXXXPYRI*CVAG*MKAQEAMTSDHVMGSYHALAVVAGARRN 541
AIVD+N + QEA++SD+ M YHALA++ R N
Sbjct: 143 AIVDRNSAISSSAIVSSIHLMRKSSEVVRRWANEVQEAVSSDNHMVQYHALALLYQIRAN 202
Query: 542 D 544
D
Sbjct: 203 D 203
>AF067609-7|AAC17536.1| 162|Caenorhabditis elegans Hypothetical
protein C23H5.8b protein.
Length = 162
Score = 28.3 bits (60), Expect = 4.4
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = -3
Query: 150 SFVVAKNISVASCVVNSSPPLWFS 79
SF V + ++ CV++S+PP W S
Sbjct: 16 SFAVQTSGNIGKCVLSSAPPSWLS 39
>AF067609-6|AAC17535.1| 203|Caenorhabditis elegans Hypothetical
protein C23H5.8a protein.
Length = 203
Score = 28.3 bits (60), Expect = 4.4
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = -3
Query: 150 SFVVAKNISVASCVVNSSPPLWFS 79
SF V + ++ CV++S+PP W S
Sbjct: 16 SFAVQTSGNIGKCVLSSAPPSWLS 39
>Z96047-4|CAB09414.1| 796|Caenorhabditis elegans Hypothetical
protein DY3.5 protein.
Length = 796
Score = 27.9 bits (59), Expect = 5.8
Identities = 13/41 (31%), Positives = 22/41 (53%)
Frame = -1
Query: 557 TVEINRCVLPQQQQPRHGKNPSHDLKSWPPVLSFIQRRTKS 435
T EI + QQQQP++ ++ S+P ++ Q T+S
Sbjct: 183 TAEIQQQQYQQQQQPQYSQSYGESPSSFPTSFTYTQPETQS 223
>Z70268-5|CAJ85767.2| 1204|Caenorhabditis elegans Hypothetical
protein T21E8.1b protein.
Length = 1204
Score = 27.9 bits (59), Expect = 5.8
Identities = 13/35 (37%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Frame = +2
Query: 188 YLCI-KELSPMAQDVIIVTSSLTKDMTGKDDEYRP 289
YL + KE++PM ++++T S+T +M G Y P
Sbjct: 885 YLALRKEVAPMDTYLVLMTLSMTANMAGSAAAYLP 919
>Z70268-4|CAA94220.3| 1263|Caenorhabditis elegans Hypothetical protein
T21E8.1a protein.
Length = 1263
Score = 27.9 bits (59), Expect = 5.8
Identities = 13/35 (37%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Frame = +2
Query: 188 YLCI-KELSPMAQDVIIVTSSLTKDMTGKDDEYRP 289
YL + KE++PM ++++T S+T +M G Y P
Sbjct: 944 YLALRKEVAPMDTYLVLMTLSMTANMAGSAAAYLP 978
>AC006810-5|AAF59629.2| 516|Caenorhabditis elegans Cytochrome p450
family protein 32B1 protein.
Length = 516
Score = 27.5 bits (58), Expect = 7.7
Identities = 19/54 (35%), Positives = 28/54 (51%), Gaps = 6/54 (11%)
Frame = +2
Query: 173 LRRLVYL--CIKELSPMAQDVIIVTSSLTKDM----TGKDDEYRPAAIRALCSI 316
++++VYL CIKE M V V+ LT+D+ K D PA I + +I
Sbjct: 363 IQKMVYLEQCIKETLRMTPPVPFVSRKLTEDVKIPHATKPDLLLPAGINCMINI 416
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,959,085
Number of Sequences: 27780
Number of extensions: 290536
Number of successful extensions: 793
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 766
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 791
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1268802960
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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