Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--2002
         (596 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF393494-1|AAL60419.1|  144|Apis mellifera odorant binding prote...    23   2.3  
AF166496-1|AAD51944.1|  144|Apis mellifera pheromone-binding pro...    23   2.3  
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    23   2.3  
DQ071552-1|AAY82248.1|  495|Apis mellifera anarchy 1 protein.          21   6.9  
L10710-1|AAA27730.1|  382|Apis mellifera hyaluronidase protein.        21   9.2  

>AF393494-1|AAL60419.1|  144|Apis mellifera odorant binding protein
           ASP1 protein.
          Length = 144

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = -3

Query: 135 KNISVASCVVNSSPPLWF 82
           K  ++A CV  S+P +WF
Sbjct: 125 KIYNLAKCVQESAPDVWF 142


>AF166496-1|AAD51944.1|  144|Apis mellifera pheromone-binding
           protein ASP1 protein.
          Length = 144

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = -3

Query: 135 KNISVASCVVNSSPPLWF 82
           K  ++A CV  S+P +WF
Sbjct: 125 KIYNLAKCVQESAPDVWF 142


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
            protein.
          Length = 1143

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 13/39 (33%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
 Frame = +1

Query: 409  RFASVSPVPDLVRRWINESTGGHDFRSCDGFLPC-LGCC 522
            RF S+S  PD+ +  I+ +     +++ DGF P   G C
Sbjct: 897  RFYSISSSPDVHQGQIHLTVAVVQYKTQDGFGPIHYGVC 935


>DQ071552-1|AAY82248.1|  495|Apis mellifera anarchy 1 protein.
          Length = 495

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 7/14 (50%), Positives = 13/14 (92%)
 Frame = +3

Query: 15  ISTLHPCIRENASI 56
           +S+++PCI +NA+I
Sbjct: 230 MSSINPCIFDNATI 243


>L10710-1|AAA27730.1|  382|Apis mellifera hyaluronidase protein.
          Length = 382

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 8/23 (34%), Positives = 14/23 (60%)
 Frame = +1

Query: 403 GLRFASVSPVPDLVRRWINESTG 471
           GLRF  VS    +++ W+++  G
Sbjct: 58  GLRFEEVSEKYGILQNWMDKFRG 80


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 166,149
Number of Sequences: 438
Number of extensions: 3220
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17482179
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)