Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1996
         (430 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.            23   6.1  
CR954256-2|CAJ14143.1|  295|Anopheles gambiae cyclin protein.          22   8.0  

>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
          Length = 3318

 Score = 22.6 bits (46), Expect = 6.1
 Identities = 14/36 (38%), Positives = 21/36 (58%)
 Frame = +3

Query: 48   LGRILGTCLLNGRPPEEARIFS*VG*KDFLRLRGTV 155
            +GR  GT LL+  PPE  ++   +   D L L+GT+
Sbjct: 2945 IGRPGGTILLDKIPPEAMKVIDEILAIDKL-LKGTI 2979


>CR954256-2|CAJ14143.1|  295|Anopheles gambiae cyclin protein.
          Length = 295

 Score = 22.2 bits (45), Expect = 8.0
 Identities = 9/21 (42%), Positives = 13/21 (61%), Gaps = 1/21 (4%)
 Frame = +1

Query: 250 CI*PSCGTSWIWRN-ASLRCP 309
           C   +CGT W +R+ +SL  P
Sbjct: 206 CCRKTCGTGWKYRSISSLHAP 226


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 455,653
Number of Sequences: 2352
Number of extensions: 8152
Number of successful extensions: 15
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 35292513
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)