Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1992
         (667 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Y17918-1|CAA76938.1| 1441|Drosophila melanogaster CRAG protein p...    29   5.7  
AY094962-1|AAM11315.1| 1083|Drosophila melanogaster SD04240p pro...    29   5.7  
AE014298-1214|AAF46397.3| 1644|Drosophila melanogaster CG12737-P...    29   5.7  
AE014298-1213|AAF46398.3| 1671|Drosophila melanogaster CG12737-P...    29   5.7  
AE014296-2334|AAO41253.1|  653|Drosophila melanogaster CG17364-P...    29   5.7  
AE014296-2333|AAF49781.3|  804|Drosophila melanogaster CG17364-P...    29   5.7  

>Y17918-1|CAA76938.1| 1441|Drosophila melanogaster CRAG protein
            protein.
          Length = 1441

 Score = 29.1 bits (62), Expect = 5.7
 Identities = 11/29 (37%), Positives = 15/29 (51%)
 Frame = +3

Query: 360  LALPANKRNEHHIELRRTSTVYVHCRWEN 446
            L LP     EH   L +  TV++ C W+N
Sbjct: 1362 LCLPVPSDKEHIDPLSKVKTVHIQCLWDN 1390


>AY094962-1|AAM11315.1| 1083|Drosophila melanogaster SD04240p
           protein.
          Length = 1083

 Score = 29.1 bits (62), Expect = 5.7
 Identities = 11/29 (37%), Positives = 15/29 (51%)
 Frame = +3

Query: 360 LALPANKRNEHHIELRRTSTVYVHCRWEN 446
           L LP     EH   L +  TV++ C W+N
Sbjct: 911 LCLPVPSDKEHIDPLSKVKTVHIQCLWDN 939


>AE014298-1214|AAF46397.3| 1644|Drosophila melanogaster CG12737-PB,
            isoform B protein.
          Length = 1644

 Score = 29.1 bits (62), Expect = 5.7
 Identities = 11/29 (37%), Positives = 15/29 (51%)
 Frame = +3

Query: 360  LALPANKRNEHHIELRRTSTVYVHCRWEN 446
            L LP     EH   L +  TV++ C W+N
Sbjct: 1472 LCLPVPSDKEHIDPLSKVKTVHIQCLWDN 1500


>AE014298-1213|AAF46398.3| 1671|Drosophila melanogaster CG12737-PA,
            isoform A protein.
          Length = 1671

 Score = 29.1 bits (62), Expect = 5.7
 Identities = 11/29 (37%), Positives = 15/29 (51%)
 Frame = +3

Query: 360  LALPANKRNEHHIELRRTSTVYVHCRWEN 446
            L LP     EH   L +  TV++ C W+N
Sbjct: 1499 LCLPVPSDKEHIDPLSKVKTVHIQCLWDN 1527


>AE014296-2334|AAO41253.1|  653|Drosophila melanogaster CG17364-PB,
           isoform B protein.
          Length = 653

 Score = 29.1 bits (62), Expect = 5.7
 Identities = 11/32 (34%), Positives = 20/32 (62%)
 Frame = -2

Query: 345 IYGDRNSMCIHLQIVFKRNCNLATRFYNISFI 250
           IY D NS+C+  Q+     C  A+ F+++S++
Sbjct: 193 IYNDENSLCV--QVRHNAMCQCASGFHSVSYV 222


>AE014296-2333|AAF49781.3|  804|Drosophila melanogaster CG17364-PA,
           isoform A protein.
          Length = 804

 Score = 29.1 bits (62), Expect = 5.7
 Identities = 11/32 (34%), Positives = 20/32 (62%)
 Frame = -2

Query: 345 IYGDRNSMCIHLQIVFKRNCNLATRFYNISFI 250
           IY D NS+C+  Q+     C  A+ F+++S++
Sbjct: 193 IYNDENSLCV--QVRHNAMCQCASGFHSVSYV 222


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,756,776
Number of Sequences: 53049
Number of extensions: 385626
Number of successful extensions: 836
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 823
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 836
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2868730650
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)