Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1990
         (738 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY135184-1|AAN17505.1| 1009|Anopheles gambiae laccase 1 protein.       24   4.3  
AY280611-1|AAQ21364.1| 1102|Anopheles gambiae chloride/bicarbona...    24   5.6  
AY462096-1|AAS21248.1|  603|Anopheles gambiae transposase protein.     23   7.4  
DQ103706-1|AAZ43087.1|  344|Anopheles gambiae pk-1 receptor prot...    23   9.8  

>AY135184-1|AAN17505.1| 1009|Anopheles gambiae laccase 1 protein.
          Length = 1009

 Score = 24.2 bits (50), Expect = 4.3
 Identities = 11/37 (29%), Positives = 19/37 (51%)
 Frame = +2

Query: 188 GRHKRKKNFLFHSRLSAVISTLTPLSVISSVISFCHT 298
           GRH+     L  + +  ++S + P+    SVI+ C T
Sbjct: 11  GRHRLPALVLVTATILPILSLMVPIGHSQSVITDCDT 47


>AY280611-1|AAQ21364.1| 1102|Anopheles gambiae chloride/bicarbonate
           anion exchanger protein.
          Length = 1102

 Score = 23.8 bits (49), Expect = 5.6
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = +2

Query: 296 TPSMASSIDLFPLYHVHTSPSHMH 367
           T    SS + FP++ V ++PS MH
Sbjct: 247 TSKSISSANSFPMHVVSSAPSGMH 270


>AY462096-1|AAS21248.1|  603|Anopheles gambiae transposase protein.
          Length = 603

 Score = 23.4 bits (48), Expect = 7.4
 Identities = 8/32 (25%), Positives = 18/32 (56%)
 Frame = +2

Query: 230 LSAVISTLTPLSVISSVISFCHTPSMASSIDL 325
           ++ V    + +   S+ ++FCH P  A +++L
Sbjct: 242 VAMVTDNASNMKAASTELNFCHIPCFAHTLNL 273


>DQ103706-1|AAZ43087.1|  344|Anopheles gambiae pk-1 receptor
           protein.
          Length = 344

 Score = 23.0 bits (47), Expect = 9.8
 Identities = 8/11 (72%), Positives = 10/11 (90%)
 Frame = +1

Query: 274 ICHIFLSHTIN 306
           ICH FLSHT++
Sbjct: 148 ICHPFLSHTMS 158


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 721,442
Number of Sequences: 2352
Number of extensions: 14428
Number of successful extensions: 36
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 36
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 75676146
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)