Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1990
         (738 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly pro...    24   1.3  
S78459-1|AAB34403.1|   50|Apis mellifera mast cell-degranulating...    23   3.0  
DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    22   5.2  
AB073998-1|BAC76402.1|  339|Apis mellifera preprotachykinin prot...    22   6.9  
AB073996-1|BAC76400.1|  215|Apis mellifera preprotachykinin prot...    22   6.9  
AB073995-1|BAC76399.1|  301|Apis mellifera preprotachykinin prot...    22   6.9  

>AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly
           protein 8 protein.
          Length = 416

 Score = 24.2 bits (50), Expect = 1.3
 Identities = 15/44 (34%), Positives = 20/44 (45%)
 Frame = -2

Query: 560 HY*NSNMILK*SAI*K*LNPNFCVKFGCTFDTVLLMWRKYLLID 429
           HY     IL   A  K ++ N  + FG   DT L  W +  L+D
Sbjct: 292 HYQGKENILWTQASAKGISDNGVLFFGLVGDTSLACWNENRLLD 335


>S78459-1|AAB34403.1|   50|Apis mellifera mast cell-degranulating
          peptide protein.
          Length = 50

 Score = 23.0 bits (47), Expect = 3.0
 Identities = 11/25 (44%), Positives = 14/25 (56%)
 Frame = +2

Query: 17 SYLRRVIFFLTYSLVTKVRLNPTSS 91
          S LR   FFL+  L+T   + PT S
Sbjct: 3  SMLRCTFFFLSVILITSYFVTPTMS 27


>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 22.2 bits (45), Expect = 5.2
 Identities = 7/11 (63%), Positives = 10/11 (90%)
 Frame = +1

Query: 274 ICHIFLSHTIN 306
           ICH F+SHT++
Sbjct: 156 ICHPFISHTMS 166


>AB073998-1|BAC76402.1|  339|Apis mellifera preprotachykinin
           protein.
          Length = 339

 Score = 21.8 bits (44), Expect = 6.9
 Identities = 8/16 (50%), Positives = 13/16 (81%)
 Frame = -1

Query: 333 RGKRSIEEAIDGV*QK 286
           RGK+S+EE +D + +K
Sbjct: 118 RGKKSLEEILDEIKKK 133


>AB073996-1|BAC76400.1|  215|Apis mellifera preprotachykinin
           protein.
          Length = 215

 Score = 21.8 bits (44), Expect = 6.9
 Identities = 8/16 (50%), Positives = 13/16 (81%)
 Frame = -1

Query: 333 RGKRSIEEAIDGV*QK 286
           RGK+S+EE +D + +K
Sbjct: 118 RGKKSLEEILDEIKKK 133


>AB073995-1|BAC76399.1|  301|Apis mellifera preprotachykinin
           protein.
          Length = 301

 Score = 21.8 bits (44), Expect = 6.9
 Identities = 8/16 (50%), Positives = 13/16 (81%)
 Frame = -1

Query: 333 RGKRSIEEAIDGV*QK 286
           RGK+S+EE +D + +K
Sbjct: 118 RGKKSLEEILDEIKKK 133


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 201,903
Number of Sequences: 438
Number of extensions: 4476
Number of successful extensions: 13
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23023035
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)