Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1988
         (699 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF264718-1|AAF75271.1|  125|Tribolium castaneum putative cytochr...    23   1.8  
X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       22   5.5  
EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggeri...    22   5.5  
AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory recept...    21   7.3  
DQ414246-1|ABD63008.1|  126|Tribolium castaneum odd-skipped prot...    21   9.7  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    21   9.7  

>AF264718-1|AAF75271.1|  125|Tribolium castaneum putative cytochrome
           P450 monooxigenaseCYP4Q6 protein.
          Length = 125

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 11/23 (47%), Positives = 13/23 (56%)
 Frame = -3

Query: 235 ILGVSGPFPVGTYETRQELSFTK 167
           IL V G   + TY   QEL +TK
Sbjct: 26  ILSVVGKEKIPTYNDLQELKYTK 48


>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 9/16 (56%), Positives = 12/16 (75%)
 Frame = +3

Query: 564 AALNQPPDRNRDPLRR 611
           A+ N+ PD N+D LRR
Sbjct: 134 ASPNRKPDDNQDHLRR 149


>EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggering
           hormone receptorisoform B protein.
          Length = 451

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 9/28 (32%), Positives = 14/28 (50%)
 Frame = -2

Query: 110 TSRSKRTRPDLLESSRNAARVCGEVRRL 27
           T  S +   D   S RN+ + CG +R +
Sbjct: 392 THTSSQQTSDSFLSKRNSEKKCGSLREI 419


>AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory receptor
           candidate 58 protein.
          Length = 376

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = +1

Query: 358 IYLRDCCKRVIFFE 399
           IY+R  CK + FFE
Sbjct: 61  IYVRIYCKEIRFFE 74


>DQ414246-1|ABD63008.1|  126|Tribolium castaneum odd-skipped
           protein.
          Length = 126

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = +3

Query: 396 RAYVCK*CNSLVPYNVNLL 452
           R ++CK CN     + NLL
Sbjct: 78  RQFICKYCNRQFTKSYNLL 96


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = +3

Query: 339 CTH*IIYLFTRLL*KGYFFRAYV 407
           CT+   Y F  LL   YF+ A++
Sbjct: 99  CTYYFYYAFIILLCVYYFYYAFI 121


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 148,487
Number of Sequences: 336
Number of extensions: 3121
Number of successful extensions: 13
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18426585
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)