Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1987
(744 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L38951-1|AAC41763.1| 876|Homo sapiens importin beta subunit pro... 268 1e-71
BT009797-1|AAP88799.1| 876|Homo sapiens karyopherin (importin) ... 268 1e-71
BC036703-1|AAH36703.1| 876|Homo sapiens karyopherin (importin) ... 268 1e-71
BC024045-1|AAH24045.1| 876|Homo sapiens karyopherin (importin) ... 268 1e-71
BC003572-1|AAH03572.1| 876|Homo sapiens karyopherin (importin) ... 268 1e-71
L39793-1|AAA82869.1| 876|Homo sapiens nuclear factor p97 protein. 268 1e-71
AB040942-1|BAA96033.1| 1326|Homo sapiens KIAA1509 protein protein. 34 0.47
AB209476-1|BAD92713.1| 1264|Homo sapiens importin 4 variant prot... 30 7.6
>L38951-1|AAC41763.1| 876|Homo sapiens importin beta subunit
protein.
Length = 876
Score = 268 bits (658), Expect = 1e-71
Identities = 138/224 (61%), Positives = 166/224 (74%)
Frame = +1
Query: 73 LTLIQILEKTVSPDRNELEAAVRYLDHAATTNFTTFIKMLSDVPFFFQGGNSQVARMAAG 252
+ LI ILEKTVSPDR ELEAA ++L+ AA N TF+ LS V GNSQVAR+AAG
Sbjct: 1 MELITILEKTVSPDRLELEAAQKFLERAAVENLPTFLVELSRV--LANPGNSQVARVAAG 58
Query: 253 LQLKNHLTSKDPTLKQQYQQRWLALAEDVRLYIKENILAAIGTENSRPSSAAQCVAYVAV 432
LQ+KN LTSKDP +K QYQQRWLA+ + R +K +L +GTE RPSSA+QCVA +A
Sbjct: 59 LQIKNSLTSKDPDIKAQYQQRWLAIDANARREVKNYVLQTLGTETYRPSSASQCVAGIAC 118
Query: 433 AELPVGQWNDLIPILVENVVHVQSTELKKEATLEAIGYICQDIDAEVLTERSNQILTGII 612
AE+PV QW +LIP LV NV + STE KE+TLEAIGYICQDID E L ++SN+ILT II
Sbjct: 119 AEIPVNQWPELIPQLVANVTNPNSTEHMKESTLEAIGYICQDIDPEQLQDKSNEILTAII 178
Query: 613 HGMRSTEPSNHVRLAATQALLNSLEFTRANFGKRKRKETFFLEV 744
GMR EPSN+V+LAAT ALLNSLEFT+ANF K + F ++V
Sbjct: 179 QGMRKEEPSNNVKLAATNALLNSLEFTKANFDKESERH-FIMQV 221
>BT009797-1|AAP88799.1| 876|Homo sapiens karyopherin (importin)
beta 1 protein.
Length = 876
Score = 268 bits (658), Expect = 1e-71
Identities = 138/224 (61%), Positives = 166/224 (74%)
Frame = +1
Query: 73 LTLIQILEKTVSPDRNELEAAVRYLDHAATTNFTTFIKMLSDVPFFFQGGNSQVARMAAG 252
+ LI ILEKTVSPDR ELEAA ++L+ AA N TF+ LS V GNSQVAR+AAG
Sbjct: 1 MELITILEKTVSPDRLELEAAQKFLERAAVENLPTFLVELSRV--LANPGNSQVARVAAG 58
Query: 253 LQLKNHLTSKDPTLKQQYQQRWLALAEDVRLYIKENILAAIGTENSRPSSAAQCVAYVAV 432
LQ+KN LTSKDP +K QYQQRWLA+ + R +K +L +GTE RPSSA+QCVA +A
Sbjct: 59 LQIKNSLTSKDPDIKAQYQQRWLAIDANARREVKNYVLQTLGTETYRPSSASQCVAGIAC 118
Query: 433 AELPVGQWNDLIPILVENVVHVQSTELKKEATLEAIGYICQDIDAEVLTERSNQILTGII 612
AE+PV QW +LIP LV NV + STE KE+TLEAIGYICQDID E L ++SN+ILT II
Sbjct: 119 AEIPVNQWPELIPQLVANVTNPNSTEHMKESTLEAIGYICQDIDPEQLQDKSNEILTAII 178
Query: 613 HGMRSTEPSNHVRLAATQALLNSLEFTRANFGKRKRKETFFLEV 744
GMR EPSN+V+LAAT ALLNSLEFT+ANF K + F ++V
Sbjct: 179 QGMRKEEPSNNVKLAATNALLNSLEFTKANFDKESERH-FIMQV 221
>BC036703-1|AAH36703.1| 876|Homo sapiens karyopherin (importin)
beta 1 protein.
Length = 876
Score = 268 bits (658), Expect = 1e-71
Identities = 138/224 (61%), Positives = 166/224 (74%)
Frame = +1
Query: 73 LTLIQILEKTVSPDRNELEAAVRYLDHAATTNFTTFIKMLSDVPFFFQGGNSQVARMAAG 252
+ LI ILEKTVSPDR ELEAA ++L+ AA N TF+ LS V GNSQVAR+AAG
Sbjct: 1 MELITILEKTVSPDRLELEAAQKFLERAAVENLPTFLVELSRV--LANPGNSQVARVAAG 58
Query: 253 LQLKNHLTSKDPTLKQQYQQRWLALAEDVRLYIKENILAAIGTENSRPSSAAQCVAYVAV 432
LQ+KN LTSKDP +K QYQQRWLA+ + R +K +L +GTE RPSSA+QCVA +A
Sbjct: 59 LQIKNSLTSKDPDIKAQYQQRWLAIDANARREVKNYVLQTLGTETYRPSSASQCVAGIAC 118
Query: 433 AELPVGQWNDLIPILVENVVHVQSTELKKEATLEAIGYICQDIDAEVLTERSNQILTGII 612
AE+PV QW +LIP LV NV + STE KE+TLEAIGYICQDID E L ++SN+ILT II
Sbjct: 119 AEIPVNQWPELIPQLVANVTNPNSTEHMKESTLEAIGYICQDIDPEQLQDKSNEILTAII 178
Query: 613 HGMRSTEPSNHVRLAATQALLNSLEFTRANFGKRKRKETFFLEV 744
GMR EPSN+V+LAAT ALLNSLEFT+ANF K + F ++V
Sbjct: 179 QGMRKEEPSNNVKLAATNALLNSLEFTKANFDKESERH-FIMQV 221
>BC024045-1|AAH24045.1| 876|Homo sapiens karyopherin (importin)
beta 1 protein.
Length = 876
Score = 268 bits (658), Expect = 1e-71
Identities = 138/224 (61%), Positives = 166/224 (74%)
Frame = +1
Query: 73 LTLIQILEKTVSPDRNELEAAVRYLDHAATTNFTTFIKMLSDVPFFFQGGNSQVARMAAG 252
+ LI ILEKTVSPDR ELEAA ++L+ AA N TF+ LS V GNSQVAR+AAG
Sbjct: 1 MELITILEKTVSPDRLELEAAQKFLERAAVENLPTFLVELSRV--LANPGNSQVARVAAG 58
Query: 253 LQLKNHLTSKDPTLKQQYQQRWLALAEDVRLYIKENILAAIGTENSRPSSAAQCVAYVAV 432
LQ+KN LTSKDP +K QYQQRWLA+ + R +K +L +GTE RPSSA+QCVA +A
Sbjct: 59 LQIKNSLTSKDPDIKAQYQQRWLAIDANARREVKNYVLQTLGTETYRPSSASQCVAGIAC 118
Query: 433 AELPVGQWNDLIPILVENVVHVQSTELKKEATLEAIGYICQDIDAEVLTERSNQILTGII 612
AE+PV QW +LIP LV NV + STE KE+TLEAIGYICQDID E L ++SN+ILT II
Sbjct: 119 AEIPVNQWPELIPQLVANVTNPNSTEHMKESTLEAIGYICQDIDPEQLQDKSNEILTAII 178
Query: 613 HGMRSTEPSNHVRLAATQALLNSLEFTRANFGKRKRKETFFLEV 744
GMR EPSN+V+LAAT ALLNSLEFT+ANF K + F ++V
Sbjct: 179 QGMRKEEPSNNVKLAATNALLNSLEFTKANFDKESERH-FIMQV 221
>BC003572-1|AAH03572.1| 876|Homo sapiens karyopherin (importin)
beta 1 protein.
Length = 876
Score = 268 bits (658), Expect = 1e-71
Identities = 138/224 (61%), Positives = 166/224 (74%)
Frame = +1
Query: 73 LTLIQILEKTVSPDRNELEAAVRYLDHAATTNFTTFIKMLSDVPFFFQGGNSQVARMAAG 252
+ LI ILEKTVSPDR ELEAA ++L+ AA N TF+ LS V GNSQVAR+AAG
Sbjct: 1 MELITILEKTVSPDRLELEAAQKFLERAAVENLPTFLVELSRV--LANPGNSQVARVAAG 58
Query: 253 LQLKNHLTSKDPTLKQQYQQRWLALAEDVRLYIKENILAAIGTENSRPSSAAQCVAYVAV 432
LQ+KN LTSKDP +K QYQQRWLA+ + R +K +L +GTE RPSSA+QCVA +A
Sbjct: 59 LQIKNSLTSKDPDIKAQYQQRWLAIDANARREVKNYVLQTLGTETYRPSSASQCVAGIAC 118
Query: 433 AELPVGQWNDLIPILVENVVHVQSTELKKEATLEAIGYICQDIDAEVLTERSNQILTGII 612
AE+PV QW +LIP LV NV + STE KE+TLEAIGYICQDID E L ++SN+ILT II
Sbjct: 119 AEIPVNQWPELIPQLVANVTNPNSTEHMKESTLEAIGYICQDIDPEQLQDKSNEILTAII 178
Query: 613 HGMRSTEPSNHVRLAATQALLNSLEFTRANFGKRKRKETFFLEV 744
GMR EPSN+V+LAAT ALLNSLEFT+ANF K + F ++V
Sbjct: 179 QGMRKEEPSNNVKLAATNALLNSLEFTKANFDKESERH-FIMQV 221
>L39793-1|AAA82869.1| 876|Homo sapiens nuclear factor p97 protein.
Length = 876
Score = 268 bits (657), Expect = 1e-71
Identities = 138/224 (61%), Positives = 166/224 (74%)
Frame = +1
Query: 73 LTLIQILEKTVSPDRNELEAAVRYLDHAATTNFTTFIKMLSDVPFFFQGGNSQVARMAAG 252
+ LI ILEKTVSPDR ELEAA ++L+ AA N TF+ LS V GNSQVAR+AAG
Sbjct: 1 MELITILEKTVSPDRLELEAAQKFLERAAVENLPTFLVELSRV--LANPGNSQVARVAAG 58
Query: 253 LQLKNHLTSKDPTLKQQYQQRWLALAEDVRLYIKENILAAIGTENSRPSSAAQCVAYVAV 432
LQ+KN LTSKDP +K QYQQRWLA+ + R +K +L +GTE RPSSA+QCVA +A
Sbjct: 59 LQIKNSLTSKDPDIKAQYQQRWLAIDANARREVKNYVLHTLGTETYRPSSASQCVAGIAC 118
Query: 433 AELPVGQWNDLIPILVENVVHVQSTELKKEATLEAIGYICQDIDAEVLTERSNQILTGII 612
AE+PV QW +LIP LV NV + STE KE+TLEAIGYICQDID E L ++SN+ILT II
Sbjct: 119 AEIPVNQWPELIPQLVANVTNPNSTEHMKESTLEAIGYICQDIDPEQLQDKSNEILTAII 178
Query: 613 HGMRSTEPSNHVRLAATQALLNSLEFTRANFGKRKRKETFFLEV 744
GMR EPSN+V+LAAT ALLNSLEFT+ANF K + F ++V
Sbjct: 179 QGMRKEEPSNNVKLAATNALLNSLEFTKANFDKESERH-FIMQV 221
>AB040942-1|BAA96033.1| 1326|Homo sapiens KIAA1509 protein protein.
Length = 1326
Score = 34.3 bits (75), Expect = 0.47
Identities = 26/92 (28%), Positives = 43/92 (46%), Gaps = 9/92 (9%)
Frame = +1
Query: 58 HAETTLTLIQILEKTVSPDRN------ELEAAVRYLDHAATTN--FTTFIKMLSDVPFFF 213
H E T+ L+++ ++ + +RN E + L H T N F++ I L F
Sbjct: 343 HKEATMELLRVKDRAIELERNNAALQAEKQLLKEQLQHLETQNVTFSSQILTLQKQSAFL 402
Query: 214 QGGNSQVARMAAGLQLKNH-LTSKDPTLKQQY 306
Q N+ + A LQ++N L+S+ L QY
Sbjct: 403 QEHNTTLQTQTAKLQVENSTLSSQSAALTAQY 434
>AB209476-1|BAD92713.1| 1264|Homo sapiens importin 4 variant
protein.
Length = 1264
Score = 30.3 bits (65), Expect = 7.6
Identities = 13/33 (39%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Frame = +2
Query: 113 IEMNWKQQLDTSTMLPPQISQHSSKCCPM-SPF 208
IE W+ +T PP++ +S CCP SPF
Sbjct: 141 IESPWQPAGRAATPFPPEVGVRTSTCCPSPSPF 173
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 98,564,031
Number of Sequences: 237096
Number of extensions: 1976598
Number of successful extensions: 8240
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8097
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8234
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8903143626
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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