Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1986
(692 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 219 2e-57
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 219 2e-57
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 219 2e-57
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 219 2e-57
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 219 2e-57
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 219 2e-57
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 219 2e-57
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 219 2e-57
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 219 2e-57
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 216 1e-56
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 215 3e-56
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 137 6e-33
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 120 1e-27
AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 110 1e-24
J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein ( C.ele... 93 2e-19
J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein ( C.ele... 93 2e-19
J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein ( C.ele... 93 2e-19
J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein ( C.ele... 87 9e-18
AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical ... 75 4e-14
Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical pr... 38 0.007
U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related p... 38 0.007
Z82258-1|CAB05122.2| 906|Caenorhabditis elegans Hypothetical pr... 29 2.4
Z93339-1|CAB07544.1| 2105|Caenorhabditis elegans Hypothetical pr... 28 5.5
Z70203-7|CAA94110.1| 2105|Caenorhabditis elegans Hypothetical pr... 28 5.5
AL023825-2|CAA19443.1| 2105|Caenorhabditis elegans Hypothetical ... 28 5.5
Z29443-8|CAE45742.1| 455|Caenorhabditis elegans Hypothetical pr... 28 7.3
Z29443-7|CAA82571.2| 497|Caenorhabditis elegans Hypothetical pr... 28 7.3
AL117202-8|CAB57891.1| 547|Caenorhabditis elegans Hypothetical ... 28 7.3
AF024500-5|AAB70362.1| 288|Caenorhabditis elegans Hypothetical ... 28 7.3
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 219 bits (534), Expect = 2e-57
Identities = 105/116 (90%), Positives = 106/116 (91%)
Frame = +3
Query: 162 FPRSWEGPAIRAVMVPGGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHH 341
FP P + VMV GMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHH
Sbjct: 32 FPSIVGRPRHQGVMV--GMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHH 89
Query: 342 TFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYA 509
TFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYA
Sbjct: 90 TFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYA 145
Score = 83.8 bits (198), Expect = 1e-16
Identities = 45/61 (73%), Positives = 47/61 (77%), Gaps = 1/61 (1%)
Frame = +1
Query: 511 SGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDL-GRS*PHRLPHEDPHPSRGYSFTT 687
SGRTTG+VLDSGDGV+HTVPIYEGYALPHAILRLDL GR L RGYSFTT
Sbjct: 146 SGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYL--MKILTERGYSFTT 203
Query: 688 T 690
T
Sbjct: 204 T 204
Score = 51.6 bits (118), Expect = 5e-07
Identities = 22/23 (95%), Positives = 23/23 (100%)
Frame = +1
Query: 67 MCDEEVAALVVDNGSGMCKAGFA 135
MCD+EVAALVVDNGSGMCKAGFA
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFA 23
Score = 28.7 bits (61), Expect = 4.2
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = +2
Query: 140 DDAPRAVFPSIV 175
DDAPRAVFPSIV
Sbjct: 25 DDAPRAVFPSIV 36
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 219 bits (534), Expect = 2e-57
Identities = 105/116 (90%), Positives = 106/116 (91%)
Frame = +3
Query: 162 FPRSWEGPAIRAVMVPGGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHH 341
FP P + VMV GMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHH
Sbjct: 32 FPSIVGRPRHQGVMV--GMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHH 89
Query: 342 TFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYA 509
TFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYA
Sbjct: 90 TFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYA 145
Score = 84.2 bits (199), Expect = 8e-17
Identities = 46/61 (75%), Positives = 47/61 (77%), Gaps = 1/61 (1%)
Frame = +1
Query: 511 SGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDL-GRS*PHRLPHEDPHPSRGYSFTT 687
SGRTTGIVLDSGDGV+HTVPIYEGYALPHAILRLDL GR L RGYSFTT
Sbjct: 146 SGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYL--MKILTERGYSFTT 203
Query: 688 T 690
T
Sbjct: 204 T 204
Score = 50.4 bits (115), Expect = 1e-06
Identities = 21/23 (91%), Positives = 23/23 (100%)
Frame = +1
Query: 67 MCDEEVAALVVDNGSGMCKAGFA 135
MCD++VAALVVDNGSGMCKAGFA
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFA 23
Score = 28.7 bits (61), Expect = 4.2
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = +2
Query: 140 DDAPRAVFPSIV 175
DDAPRAVFPSIV
Sbjct: 25 DDAPRAVFPSIV 36
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 219 bits (534), Expect = 2e-57
Identities = 105/116 (90%), Positives = 106/116 (91%)
Frame = +3
Query: 162 FPRSWEGPAIRAVMVPGGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHH 341
FP P + VMV GMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHH
Sbjct: 32 FPSIVGRPRHQGVMV--GMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHH 89
Query: 342 TFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYA 509
TFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYA
Sbjct: 90 TFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYA 145
Score = 83.8 bits (198), Expect = 1e-16
Identities = 45/61 (73%), Positives = 47/61 (77%), Gaps = 1/61 (1%)
Frame = +1
Query: 511 SGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDL-GRS*PHRLPHEDPHPSRGYSFTT 687
SGRTTG+VLDSGDGV+HTVPIYEGYALPHAILRLDL GR L RGYSFTT
Sbjct: 146 SGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYL--MKILTERGYSFTT 203
Query: 688 T 690
T
Sbjct: 204 T 204
Score = 51.6 bits (118), Expect = 5e-07
Identities = 22/23 (95%), Positives = 23/23 (100%)
Frame = +1
Query: 67 MCDEEVAALVVDNGSGMCKAGFA 135
MCD+EVAALVVDNGSGMCKAGFA
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFA 23
Score = 28.7 bits (61), Expect = 4.2
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = +2
Query: 140 DDAPRAVFPSIV 175
DDAPRAVFPSIV
Sbjct: 25 DDAPRAVFPSIV 36
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 219 bits (534), Expect = 2e-57
Identities = 105/116 (90%), Positives = 106/116 (91%)
Frame = +3
Query: 162 FPRSWEGPAIRAVMVPGGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHH 341
FP P + VMV GMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHH
Sbjct: 32 FPSIVGRPRHQGVMV--GMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHH 89
Query: 342 TFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYA 509
TFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYA
Sbjct: 90 TFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYA 145
Score = 83.8 bits (198), Expect = 1e-16
Identities = 45/61 (73%), Positives = 47/61 (77%), Gaps = 1/61 (1%)
Frame = +1
Query: 511 SGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDL-GRS*PHRLPHEDPHPSRGYSFTT 687
SGRTTG+VLDSGDGV+HTVPIYEGYALPHAILRLDL GR L RGYSFTT
Sbjct: 146 SGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYL--MKILTERGYSFTT 203
Query: 688 T 690
T
Sbjct: 204 T 204
Score = 51.6 bits (118), Expect = 5e-07
Identities = 22/23 (95%), Positives = 23/23 (100%)
Frame = +1
Query: 67 MCDEEVAALVVDNGSGMCKAGFA 135
MCD+EVAALVVDNGSGMCKAGFA
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFA 23
Score = 28.7 bits (61), Expect = 4.2
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = +2
Query: 140 DDAPRAVFPSIV 175
DDAPRAVFPSIV
Sbjct: 25 DDAPRAVFPSIV 36
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 219 bits (534), Expect = 2e-57
Identities = 105/116 (90%), Positives = 106/116 (91%)
Frame = +3
Query: 162 FPRSWEGPAIRAVMVPGGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHH 341
FP P + VMV GMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHH
Sbjct: 32 FPSIVGRPRHQGVMV--GMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHH 89
Query: 342 TFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYA 509
TFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYA
Sbjct: 90 TFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYA 145
Score = 83.8 bits (198), Expect = 1e-16
Identities = 45/61 (73%), Positives = 47/61 (77%), Gaps = 1/61 (1%)
Frame = +1
Query: 511 SGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDL-GRS*PHRLPHEDPHPSRGYSFTT 687
SGRTTG+VLDSGDGV+HTVPIYEGYALPHAILRLDL GR L RGYSFTT
Sbjct: 146 SGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYL--MKILTERGYSFTT 203
Query: 688 T 690
T
Sbjct: 204 T 204
Score = 51.6 bits (118), Expect = 5e-07
Identities = 22/23 (95%), Positives = 23/23 (100%)
Frame = +1
Query: 67 MCDEEVAALVVDNGSGMCKAGFA 135
MCD+EVAALVVDNGSGMCKAGFA
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFA 23
Score = 28.7 bits (61), Expect = 4.2
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = +2
Query: 140 DDAPRAVFPSIV 175
DDAPRAVFPSIV
Sbjct: 25 DDAPRAVFPSIV 36
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 219 bits (534), Expect = 2e-57
Identities = 105/116 (90%), Positives = 106/116 (91%)
Frame = +3
Query: 162 FPRSWEGPAIRAVMVPGGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHH 341
FP P + VMV GMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHH
Sbjct: 32 FPSIVGRPRHQGVMV--GMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHH 89
Query: 342 TFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYA 509
TFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYA
Sbjct: 90 TFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYA 145
Score = 84.2 bits (199), Expect = 8e-17
Identities = 46/61 (75%), Positives = 47/61 (77%), Gaps = 1/61 (1%)
Frame = +1
Query: 511 SGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDL-GRS*PHRLPHEDPHPSRGYSFTT 687
SGRTTGIVLDSGDGV+HTVPIYEGYALPHAILRLDL GR L RGYSFTT
Sbjct: 146 SGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYL--MKILTERGYSFTT 203
Query: 688 T 690
T
Sbjct: 204 T 204
Score = 48.8 bits (111), Expect = 4e-06
Identities = 19/23 (82%), Positives = 23/23 (100%)
Frame = +1
Query: 67 MCDEEVAALVVDNGSGMCKAGFA 135
MCD++VAAL++DNGSGMCKAGFA
Sbjct: 1 MCDDDVAALILDNGSGMCKAGFA 23
Score = 28.7 bits (61), Expect = 4.2
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = +2
Query: 140 DDAPRAVFPSIV 175
DDAPRAVFPSIV
Sbjct: 25 DDAPRAVFPSIV 36
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 219 bits (534), Expect = 2e-57
Identities = 105/116 (90%), Positives = 106/116 (91%)
Frame = +3
Query: 162 FPRSWEGPAIRAVMVPGGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHH 341
FP P + VMV GMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHH
Sbjct: 32 FPSIVGRPRHQGVMV--GMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHH 89
Query: 342 TFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYA 509
TFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYA
Sbjct: 90 TFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYA 145
Score = 83.8 bits (198), Expect = 1e-16
Identities = 45/61 (73%), Positives = 47/61 (77%), Gaps = 1/61 (1%)
Frame = +1
Query: 511 SGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDL-GRS*PHRLPHEDPHPSRGYSFTT 687
SGRTTG+VLDSGDGV+HTVPIYEGYALPHAILRLDL GR L RGYSFTT
Sbjct: 146 SGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYL--MKILTERGYSFTT 203
Query: 688 T 690
T
Sbjct: 204 T 204
Score = 51.6 bits (118), Expect = 5e-07
Identities = 22/23 (95%), Positives = 23/23 (100%)
Frame = +1
Query: 67 MCDEEVAALVVDNGSGMCKAGFA 135
MCD+EVAALVVDNGSGMCKAGFA
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFA 23
Score = 28.7 bits (61), Expect = 4.2
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = +2
Query: 140 DDAPRAVFPSIV 175
DDAPRAVFPSIV
Sbjct: 25 DDAPRAVFPSIV 36
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 219 bits (534), Expect = 2e-57
Identities = 105/116 (90%), Positives = 106/116 (91%)
Frame = +3
Query: 162 FPRSWEGPAIRAVMVPGGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHH 341
FP P + VMV GMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHH
Sbjct: 18 FPSIVGRPRHQGVMV--GMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHH 75
Query: 342 TFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYA 509
TFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYA
Sbjct: 76 TFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYA 131
Score = 83.8 bits (198), Expect = 1e-16
Identities = 45/61 (73%), Positives = 47/61 (77%), Gaps = 1/61 (1%)
Frame = +1
Query: 511 SGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDL-GRS*PHRLPHEDPHPSRGYSFTT 687
SGRTTG+VLDSGDGV+HTVPIYEGYALPHAILRLDL GR L RGYSFTT
Sbjct: 132 SGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYL--MKILTERGYSFTT 189
Query: 688 T 690
T
Sbjct: 190 T 190
Score = 28.7 bits (61), Expect = 4.2
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = +2
Query: 140 DDAPRAVFPSIV 175
DDAPRAVFPSIV
Sbjct: 11 DDAPRAVFPSIV 22
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 219 bits (534), Expect = 2e-57
Identities = 105/116 (90%), Positives = 106/116 (91%)
Frame = +3
Query: 162 FPRSWEGPAIRAVMVPGGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHH 341
FP P + VMV GMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHH
Sbjct: 32 FPSIVGRPRHQGVMV--GMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHH 89
Query: 342 TFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYA 509
TFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYA
Sbjct: 90 TFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYA 145
Score = 83.8 bits (198), Expect = 1e-16
Identities = 45/61 (73%), Positives = 47/61 (77%), Gaps = 1/61 (1%)
Frame = +1
Query: 511 SGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDL-GRS*PHRLPHEDPHPSRGYSFTT 687
SGRTTG+VLDSGDGV+HTVPIYEGYALPHAILRLDL GR L RGYSFTT
Sbjct: 146 SGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYL--MKILTERGYSFTT 203
Query: 688 T 690
T
Sbjct: 204 T 204
Score = 51.6 bits (118), Expect = 5e-07
Identities = 22/23 (95%), Positives = 23/23 (100%)
Frame = +1
Query: 67 MCDEEVAALVVDNGSGMCKAGFA 135
MCD+EVAALVVDNGSGMCKAGFA
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFA 23
Score = 28.7 bits (61), Expect = 4.2
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = +2
Query: 140 DDAPRAVFPSIV 175
DDAPRAVFPSIV
Sbjct: 25 DDAPRAVFPSIV 36
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 216 bits (527), Expect = 1e-56
Identities = 99/99 (100%), Positives = 99/99 (100%)
Frame = +3
Query: 213 GMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLL 392
GMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLL
Sbjct: 3 GMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLL 62
Query: 393 TEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYA 509
TEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYA
Sbjct: 63 TEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYA 101
Score = 83.8 bits (198), Expect = 1e-16
Identities = 45/61 (73%), Positives = 47/61 (77%), Gaps = 1/61 (1%)
Frame = +1
Query: 511 SGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDL-GRS*PHRLPHEDPHPSRGYSFTT 687
SGRTTG+VLDSGDGV+HTVPIYEGYALPHAILRLDL GR L RGYSFTT
Sbjct: 102 SGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYL--MKILTERGYSFTT 159
Query: 688 T 690
T
Sbjct: 160 T 160
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 215 bits (524), Expect = 3e-56
Identities = 102/116 (87%), Positives = 105/116 (90%)
Frame = +3
Query: 162 FPRSWEGPAIRAVMVPGGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHH 341
FP P + VMV GMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHH
Sbjct: 31 FPSIVGRPRHQGVMV--GMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHH 88
Query: 342 TFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYA 509
TFYNELR+APEEHPVLLTEAPLNPK+NREKMTQIMFETFNTPAMYV IQAVLSLYA
Sbjct: 89 TFYNELRIAPEEHPVLLTEAPLNPKSNREKMTQIMFETFNTPAMYVNIQAVLSLYA 144
Score = 78.6 bits (185), Expect = 4e-15
Identities = 42/61 (68%), Positives = 46/61 (75%), Gaps = 1/61 (1%)
Frame = +1
Query: 511 SGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDL-GRS*PHRLPHEDPHPSRGYSFTT 687
SGRTTGIVLD+GDGV+HTVPIYEGYALPHAI RLDL GR + RGY+FTT
Sbjct: 145 SGRTTGIVLDTGDGVTHTVPIYEGYALPHAIQRLDLAGRDLTDYM--MKILTERGYTFTT 202
Query: 688 T 690
T
Sbjct: 203 T 203
Score = 45.2 bits (102), Expect = 4e-05
Identities = 19/21 (90%), Positives = 21/21 (100%)
Frame = +1
Query: 73 DEEVAALVVDNGSGMCKAGFA 135
+EE+AALVVDNGSGMCKAGFA
Sbjct: 2 EEEIAALVVDNGSGMCKAGFA 22
Score = 28.7 bits (61), Expect = 4.2
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = +2
Query: 140 DDAPRAVFPSIV 175
DDAPRAVFPSIV
Sbjct: 24 DDAPRAVFPSIV 35
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 137 bits (332), Expect = 6e-33
Identities = 62/110 (56%), Positives = 82/110 (74%), Gaps = 1/110 (0%)
Frame = +3
Query: 183 PAIRAVMVPGGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTF-YNEL 359
P VM G G D ++G +A+S RG+ +++YP+EHGIV NW DMEKIW + F ++L
Sbjct: 41 PKYHRVMAGGLDG--DIFIGPKAESNRGLFSIEYPMEHGIVNNWSDMEKIWEYIFGQDQL 98
Query: 360 RVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYA 509
++ PEEHPVLLT+APLNP NRE+ +I FETFN PA+Y+ +QAVLSLYA
Sbjct: 99 KIFPEEHPVLLTDAPLNPLKNRERSAEIFFETFNVPALYIQMQAVLSLYA 148
Score = 60.5 bits (140), Expect = 1e-09
Identities = 25/36 (69%), Positives = 32/36 (88%)
Frame = +1
Query: 511 SGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDL 618
+GRTTG+VLDSGDGV+H VPI +G+A+ HAI R+DL
Sbjct: 149 TGRTTGVVLDSGDGVTHAVPIVKGFAMKHAIQRMDL 184
Score = 28.7 bits (61), Expect = 4.2
Identities = 11/15 (73%), Positives = 14/15 (93%)
Frame = +1
Query: 91 LVVDNGSGMCKAGFA 135
+V+DNGSG+ KAGFA
Sbjct: 11 VVIDNGSGVIKAGFA 25
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical
protein K07C5.1 protein.
Length = 395
Score = 120 bits (289), Expect = 1e-27
Identities = 58/120 (48%), Positives = 78/120 (65%), Gaps = 1/120 (0%)
Frame = +3
Query: 153 AQCFPRSWEGPAIRAVMVPGGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 332
A FP P +R+ G + KD VG+E R +L + YP+++GIV NWDDM +
Sbjct: 29 AHIFPSMVGRPIVRSTQRVGNIEIKDLMVGEECSQLRQMLDINYPMDNGIVRNWDDMAHV 88
Query: 333 WHHTFYNE-LRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYA 509
W HTF E L + P+E +LLTE PLNP +NREKM Q+MFE + ++YVA+QAVL+LYA
Sbjct: 89 WDHTFGPEKLDIDPKECKLLLTEPPLNPNSNREKMFQVMFEQYGFNSIYVAVQAVLTLYA 148
Score = 52.0 bits (119), Expect = 4e-07
Identities = 21/35 (60%), Positives = 27/35 (77%)
Frame = +1
Query: 514 GRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDL 618
G TG+V+DSGDGV+H P+YEG+AL H RLD+
Sbjct: 150 GLLTGVVVDSGDGVTHICPVYEGFALHHLTRRLDI 184
>AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex
component protein 1 protein.
Length = 425
Score = 110 bits (264), Expect = 1e-24
Identities = 52/103 (50%), Positives = 66/103 (64%), Gaps = 1/103 (0%)
Frame = +3
Query: 204 VPGGMGQKDSYVGDEAQSKRGI-LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEH 380
V G+ D ++GDEA S T+KYPI HGIV +WD ME+ W + LR PE+H
Sbjct: 56 VGAGIDDLDFFIGDEALSPAATNYTVKYPIRHGIVEDWDLMERYWEQCIFKYLRAEPEDH 115
Query: 381 PVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYA 509
LLTE PLN NRE +IMFE+FN P +Y+A+QAVL+L A
Sbjct: 116 FFLLTEPPLNTPENREYTAEIMFESFNVPGLYIAVQAVLALTA 158
Score = 40.3 bits (90), Expect = 0.001
Identities = 16/41 (39%), Positives = 25/41 (60%)
Frame = +1
Query: 496 SRCTRSGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDL 618
SR TG+V+DSGDGV+H +P+ +GY + I + +
Sbjct: 162 SREANERSLTGLVIDSGDGVTHCIPVADGYVIGSCIKHIPI 202
>J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene IV, 5' end. ).
Length = 86
Score = 93.1 bits (221), Expect = 2e-19
Identities = 46/57 (80%), Positives = 47/57 (82%)
Frame = +3
Query: 162 FPRSWEGPAIRAVMVPGGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 332
FP P + VMV GMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI
Sbjct: 32 FPSIVGRPRHQGVMV--GMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 86
Score = 50.4 bits (115), Expect = 1e-06
Identities = 21/23 (91%), Positives = 23/23 (100%)
Frame = +1
Query: 67 MCDEEVAALVVDNGSGMCKAGFA 135
MCD++VAALVVDNGSGMCKAGFA
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFA 23
Score = 28.7 bits (61), Expect = 4.2
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = +2
Query: 140 DDAPRAVFPSIV 175
DDAPRAVFPSIV
Sbjct: 25 DDAPRAVFPSIV 36
>J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene III, 5' end. ).
Length = 86
Score = 93.1 bits (221), Expect = 2e-19
Identities = 46/57 (80%), Positives = 47/57 (82%)
Frame = +3
Query: 162 FPRSWEGPAIRAVMVPGGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 332
FP P + VMV GMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI
Sbjct: 32 FPSIVGRPRHQGVMV--GMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 86
Score = 51.6 bits (118), Expect = 5e-07
Identities = 22/23 (95%), Positives = 23/23 (100%)
Frame = +1
Query: 67 MCDEEVAALVVDNGSGMCKAGFA 135
MCD+EVAALVVDNGSGMCKAGFA
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFA 23
Score = 28.7 bits (61), Expect = 4.2
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = +2
Query: 140 DDAPRAVFPSIV 175
DDAPRAVFPSIV
Sbjct: 25 DDAPRAVFPSIV 36
>J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene I, 5' end. ).
Length = 86
Score = 93.1 bits (221), Expect = 2e-19
Identities = 46/57 (80%), Positives = 47/57 (82%)
Frame = +3
Query: 162 FPRSWEGPAIRAVMVPGGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 332
FP P + VMV GMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI
Sbjct: 32 FPSIVGRPRHQGVMV--GMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 86
Score = 51.6 bits (118), Expect = 5e-07
Identities = 22/23 (95%), Positives = 23/23 (100%)
Frame = +1
Query: 67 MCDEEVAALVVDNGSGMCKAGFA 135
MCD+EVAALVVDNGSGMCKAGFA
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFA 23
Score = 28.7 bits (61), Expect = 4.2
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = +2
Query: 140 DDAPRAVFPSIV 175
DDAPRAVFPSIV
Sbjct: 25 DDAPRAVFPSIV 36
>J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene II, 5' end. ).
Length = 83
Score = 87.4 bits (207), Expect = 9e-18
Identities = 43/54 (79%), Positives = 44/54 (81%)
Frame = +3
Query: 162 FPRSWEGPAIRAVMVPGGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDM 323
FP P + VMV GMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDM
Sbjct: 32 FPSIVGRPRHQGVMV--GMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDM 83
Score = 50.4 bits (115), Expect = 1e-06
Identities = 21/23 (91%), Positives = 23/23 (100%)
Frame = +1
Query: 67 MCDEEVAALVVDNGSGMCKAGFA 135
MCD++VAALVVDNGSGMCKAGFA
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFA 23
Score = 28.7 bits (61), Expect = 4.2
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = +2
Query: 140 DDAPRAVFPSIV 175
DDAPRAVFPSIV
Sbjct: 25 DDAPRAVFPSIV 36
>AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical
protein ZK616.4 protein.
Length = 436
Score = 75.4 bits (177), Expect = 4e-14
Identities = 33/74 (44%), Positives = 49/74 (66%)
Frame = +3
Query: 288 IEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTP 467
++ G++ +W+ EKI H++ N L P EHPVL +E+ N +A REK+T+IMFE F P
Sbjct: 94 MKEGLIEDWELFEKIVEHSYENILYSNPSEHPVLFSESSWNDRARREKLTEIMFEKFQVP 153
Query: 468 AMYVAIQAVLSLYA 509
A Y++ VLS +A
Sbjct: 154 AYYLSKNVVLSCFA 167
Score = 44.4 bits (100), Expect = 8e-05
Identities = 16/40 (40%), Positives = 28/40 (70%)
Frame = +1
Query: 502 CTRSGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLG 621
C GRT G+++DSG + VP+++GYA+ HA+++ +G
Sbjct: 165 CFAQGRTHGLMVDSGATQTSVVPVFDGYAVTHAVVKCPIG 204
>Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical
protein C08B11.6 protein.
Length = 418
Score = 37.9 bits (84), Expect = 0.007
Identities = 24/81 (29%), Positives = 38/81 (46%), Gaps = 2/81 (2%)
Frame = +3
Query: 222 QKDSYVGDEAQSKRGILTLKY--PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLT 395
+K +V E + +L Y PIE G V NWD ++IW TF + V + LT
Sbjct: 39 KKRVFVAHEQEECSDKFSLFYVRPIERGYVVNWDTQQQIWEKTF-GSMDVEASTSRIALT 97
Query: 396 EAPLNPKANREKMTQIMFETF 458
+ A + ++I+F+ F
Sbjct: 98 DNNYLIPALPDVSSEILFDYF 118
>U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related
protein-like protein.
Length = 418
Score = 37.9 bits (84), Expect = 0.007
Identities = 24/81 (29%), Positives = 38/81 (46%), Gaps = 2/81 (2%)
Frame = +3
Query: 222 QKDSYVGDEAQSKRGILTLKY--PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLT 395
+K +V E + +L Y PIE G V NWD ++IW TF + V + LT
Sbjct: 39 KKRVFVAHEQEECSDKFSLFYVRPIERGYVVNWDTQQQIWEKTF-GSMDVEASTSRIALT 97
Query: 396 EAPLNPKANREKMTQIMFETF 458
+ A + ++I+F+ F
Sbjct: 98 DNNYLIPALPDVSSEILFDYF 118
>Z82258-1|CAB05122.2| 906|Caenorhabditis elegans Hypothetical
protein C27H2.2a protein.
Length = 906
Score = 29.5 bits (63), Expect = 2.4
Identities = 18/48 (37%), Positives = 28/48 (58%), Gaps = 5/48 (10%)
Frame = -2
Query: 337 CQIFSMSSQLVTIPC-SMGYLRVRIPL----LLCASSPT*ESFCPIPP 209
CQ+FS QLVT+ SMG +++++ + LL + S T + P PP
Sbjct: 251 CQLFSSQPQLVTMNLNSMGTIKLQLVVTWLPLLASKSSTKPTIAPNPP 298
>Z93339-1|CAB07544.1| 2105|Caenorhabditis elegans Hypothetical protein
Y16B4A.2 protein.
Length = 2105
Score = 28.3 bits (60), Expect = 5.5
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = -1
Query: 560 WETPSPESSTIPVVRPERVQREH 492
W+TPS + T P R ER R H
Sbjct: 1299 WQTPSAQQQTKPKTRRERALRAH 1321
>Z70203-7|CAA94110.1| 2105|Caenorhabditis elegans Hypothetical protein
Y16B4A.2 protein.
Length = 2105
Score = 28.3 bits (60), Expect = 5.5
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = -1
Query: 560 WETPSPESSTIPVVRPERVQREH 492
W+TPS + T P R ER R H
Sbjct: 1299 WQTPSAQQQTKPKTRRERALRAH 1321
>AL023825-2|CAA19443.1| 2105|Caenorhabditis elegans Hypothetical
protein Y16B4A.2 protein.
Length = 2105
Score = 28.3 bits (60), Expect = 5.5
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = -1
Query: 560 WETPSPESSTIPVVRPERVQREH 492
W+TPS + T P R ER R H
Sbjct: 1299 WQTPSAQQQTKPKTRRERALRAH 1321
>Z29443-8|CAE45742.1| 455|Caenorhabditis elegans Hypothetical
protein T07C4.9b protein.
Length = 455
Score = 27.9 bits (59), Expect = 7.3
Identities = 14/46 (30%), Positives = 20/46 (43%)
Frame = +1
Query: 535 LDSGDGVSHTVPIYEGYALPHAILRLDLGRS*PHRLPHEDPHPSRG 672
++SG G + P Y GY P G P+ P + P+P G
Sbjct: 1 MNSGGGYPNQQPSYGGYGQPPQQPGYGNGSYDPYGQPQQQPYPGGG 46
>Z29443-7|CAA82571.2| 497|Caenorhabditis elegans Hypothetical
protein T07C4.9a protein.
Length = 497
Score = 27.9 bits (59), Expect = 7.3
Identities = 14/46 (30%), Positives = 20/46 (43%)
Frame = +1
Query: 535 LDSGDGVSHTVPIYEGYALPHAILRLDLGRS*PHRLPHEDPHPSRG 672
++SG G + P Y GY P G P+ P + P+P G
Sbjct: 43 MNSGGGYPNQQPSYGGYGQPPQQPGYGNGSYDPYGQPQQQPYPGGG 88
>AL117202-8|CAB57891.1| 547|Caenorhabditis elegans Hypothetical
protein Y47D3A.11 protein.
Length = 547
Score = 27.9 bits (59), Expect = 7.3
Identities = 13/39 (33%), Positives = 22/39 (56%)
Frame = -1
Query: 161 TLREEHHLNAKPALHIPEPLSTTNAATSSSHILN*FLIK 45
TL + HL+ + L +P STT AT + ++N L++
Sbjct: 56 TLTVKEHLDIQAKLRLPPGTSTTARATRVNEVMNEMLLE 94
>AF024500-5|AAB70362.1| 288|Caenorhabditis elegans Hypothetical
protein K06H6.2 protein.
Length = 288
Score = 27.9 bits (59), Expect = 7.3
Identities = 12/39 (30%), Positives = 21/39 (53%)
Frame = +3
Query: 405 LNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYAFRSY 521
L P + + QI E TPA ++++ ++S Y FR +
Sbjct: 211 LEPLISEHFVCQIFIEVHGTPAEHLSMLRMMSKYGFRLF 249
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,927,911
Number of Sequences: 27780
Number of extensions: 389261
Number of successful extensions: 1574
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 1346
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1550
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1592382278
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -