Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1981
         (612 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory recept...    23   2.0  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    23   2.0  
AY695258-1|AAW21975.1|  232|Tribolium castaneum muscle segment h...    22   3.5  
AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein ...    21   6.2  
EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    21   8.2  

>AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory receptor
           candidate 52 protein.
          Length = 360

 Score = 23.0 bits (47), Expect = 2.0
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = -3

Query: 319 KLFKNVKSFENHENSKK 269
           KL KN+K  +NH N ++
Sbjct: 95  KLLKNLKMVQNHNNIRE 111


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 23.0 bits (47), Expect = 2.0
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = -3

Query: 319 KLFKNVKSFENHENSKK 269
           KL KN+K  +NH N ++
Sbjct: 95  KLLKNLKMVQNHNNIRE 111


>AY695258-1|AAW21975.1|  232|Tribolium castaneum muscle segment
           homeodomain protein protein.
          Length = 232

 Score = 22.2 bits (45), Expect = 3.5
 Identities = 10/28 (35%), Positives = 17/28 (60%)
 Frame = -2

Query: 128 LTEDEKEPLGNSTSDIEDNDIRETLSDD 45
           L++ E E + +  SD +D+D   T+ DD
Sbjct: 20  LSKKEDEEVEHRLSDRDDDDENITVDDD 47


>AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein
           protein.
          Length = 370

 Score = 21.4 bits (43), Expect = 6.2
 Identities = 7/20 (35%), Positives = 10/20 (50%)
 Frame = -3

Query: 334 CSACNKLFKNVKSFENHENS 275
           C  CN+ F      +NHE +
Sbjct: 137 CEVCNRSFGYKHVLQNHERT 156


>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 21.0 bits (42), Expect = 8.2
 Identities = 11/37 (29%), Positives = 18/37 (48%)
 Frame = -2

Query: 128 LTEDEKEPLGNSTSDIEDNDIRETLSDDSGKVKPLPK 18
           +T+D  EPLG  T  +      +T   +  K+K + K
Sbjct: 165 VTQDRGEPLGRGTKIVLHMKEDQTEFLEEHKIKEIVK 201


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 101,412
Number of Sequences: 336
Number of extensions: 1591
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15561709
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)