Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1981
(612 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U41534-6|AAB47598.1| 375|Caenorhabditis elegans Hypothetical pr... 41 8e-04
Z81113-2|CAB03279.1| 510|Caenorhabditis elegans Hypothetical pr... 36 0.017
Z54237-1|CAA90987.2| 445|Caenorhabditis elegans Hypothetical pr... 30 1.1
Z68108-14|CAA92133.3| 2066|Caenorhabditis elegans Hypothetical p... 29 2.0
Z68108-13|CAF31493.1| 2048|Caenorhabditis elegans Hypothetical p... 29 2.0
Z68108-12|CAF31492.1| 2101|Caenorhabditis elegans Hypothetical p... 29 2.0
Z68108-11|CAF31491.1| 2134|Caenorhabditis elegans Hypothetical p... 29 2.0
Z68108-10|CAF31490.1| 1888|Caenorhabditis elegans Hypothetical p... 29 2.0
Z68108-9|CAF31489.1| 1927|Caenorhabditis elegans Hypothetical pr... 29 2.0
Z68108-8|CAF31488.1| 1509|Caenorhabditis elegans Hypothetical pr... 29 2.0
Z68108-7|CAF31487.1| 1692|Caenorhabditis elegans Hypothetical pr... 29 2.0
Z68108-6|CAF31486.1| 537|Caenorhabditis elegans Hypothetical pr... 29 2.0
L17337-4|ABM74561.1| 217|Caenorhabditis elegans Hypothetical pr... 29 2.0
AY390552-1|AAQ94964.1| 557|Caenorhabditis elegans SMA-9 class I... 29 2.0
AY390551-1|AAQ94963.1| 926|Caenorhabditis elegans SMA-9 class I... 29 2.0
AY390550-1|AAQ94962.1| 537|Caenorhabditis elegans SMA-9 class I... 29 2.0
AY390545-1|AAQ94957.1| 792|Caenorhabditis elegans SMA-9 class I... 29 2.0
Z35663-13|CAA84729.1| 234|Caenorhabditis elegans Hypothetical p... 29 2.6
Z81556-2|CAB04525.2| 445|Caenorhabditis elegans Hypothetical pr... 28 4.6
AL110501-2|CAE47474.1| 1271|Caenorhabditis elegans Hypothetical ... 28 4.6
AL110501-1|CAB54509.1| 2129|Caenorhabditis elegans Hypothetical ... 28 4.6
AF039710-9|AAB96685.2| 172|Caenorhabditis elegans Hypothetical ... 28 6.0
U80441-11|AAB37660.3| 1037|Caenorhabditis elegans Hypothetical p... 27 8.0
>U41534-6|AAB47598.1| 375|Caenorhabditis elegans Hypothetical
protein C16A3.4 protein.
Length = 375
Score = 40.7 bits (91), Expect = 8e-04
Identities = 18/38 (47%), Positives = 24/38 (63%)
Frame = -3
Query: 340 LYCSACNKLFKNVKSFENHENSKKHKENVAKMTLDDDI 227
LYC AC K K+ + +H SKKHKEN K ++DD+
Sbjct: 71 LYCKACRKSIKSENAMTDHVASKKHKENEKK--IEDDV 106
>Z81113-2|CAB03279.1| 510|Caenorhabditis elegans Hypothetical
protein T03F6.2 protein.
Length = 510
Score = 36.3 bits (80), Expect = 0.017
Identities = 14/24 (58%), Positives = 17/24 (70%)
Frame = -3
Query: 337 YCSACNKLFKNVKSFENHENSKKH 266
YC C+K FK V + NHENSK+H
Sbjct: 317 YCVVCSKSFKTVNAKLNHENSKQH 340
>Z54237-1|CAA90987.2| 445|Caenorhabditis elegans Hypothetical
protein T11B7.1 protein.
Length = 445
Score = 30.3 bits (65), Expect = 1.1
Identities = 15/29 (51%), Positives = 20/29 (68%)
Frame = -3
Query: 319 KLFKNVKSFENHENSKKHKENVAKMTLDD 233
K +N+KS +NHENSK NV +TLD+
Sbjct: 147 KKLQNLKSIQNHENSK----NVNPLTLDE 171
>Z68108-14|CAA92133.3| 2066|Caenorhabditis elegans Hypothetical
protein T05A10.1a protein.
Length = 2066
Score = 29.5 bits (63), Expect = 2.0
Identities = 11/35 (31%), Positives = 19/35 (54%)
Frame = -3
Query: 334 CSACNKLFKNVKSFENHENSKKHKENVAKMTLDDD 230
C+ACN FK + H +SK H+ ++ + +D
Sbjct: 1301 CTACNFSFKTKGNLTKHLSSKTHQRRISNIQAGND 1335
>Z68108-13|CAF31493.1| 2048|Caenorhabditis elegans Hypothetical
protein T05A10.1f protein.
Length = 2048
Score = 29.5 bits (63), Expect = 2.0
Identities = 11/35 (31%), Positives = 19/35 (54%)
Frame = -3
Query: 334 CSACNKLFKNVKSFENHENSKKHKENVAKMTLDDD 230
C+ACN FK + H +SK H+ ++ + +D
Sbjct: 1369 CTACNFSFKTKGNLTKHLSSKTHQRRISNIQAGND 1403
>Z68108-12|CAF31492.1| 2101|Caenorhabditis elegans Hypothetical
protein T05A10.1e protein.
Length = 2101
Score = 29.5 bits (63), Expect = 2.0
Identities = 11/35 (31%), Positives = 19/35 (54%)
Frame = -3
Query: 334 CSACNKLFKNVKSFENHENSKKHKENVAKMTLDDD 230
C+ACN FK + H +SK H+ ++ + +D
Sbjct: 1369 CTACNFSFKTKGNLTKHLSSKTHQRRISNIQAGND 1403
>Z68108-11|CAF31491.1| 2134|Caenorhabditis elegans Hypothetical
protein T05A10.1d protein.
Length = 2134
Score = 29.5 bits (63), Expect = 2.0
Identities = 11/35 (31%), Positives = 19/35 (54%)
Frame = -3
Query: 334 CSACNKLFKNVKSFENHENSKKHKENVAKMTLDDD 230
C+ACN FK + H +SK H+ ++ + +D
Sbjct: 1369 CTACNFSFKTKGNLTKHLSSKTHQRRISNIQAGND 1403
>Z68108-10|CAF31490.1| 1888|Caenorhabditis elegans Hypothetical
protein T05A10.1g protein.
Length = 1888
Score = 29.5 bits (63), Expect = 2.0
Identities = 11/35 (31%), Positives = 19/35 (54%)
Frame = -3
Query: 334 CSACNKLFKNVKSFENHENSKKHKENVAKMTLDDD 230
C+ACN FK + H +SK H+ ++ + +D
Sbjct: 1369 CTACNFSFKTKGNLTKHLSSKTHQRRISNIQAGND 1403
>Z68108-9|CAF31489.1| 1927|Caenorhabditis elegans Hypothetical protein
T05A10.1i protein.
Length = 1927
Score = 29.5 bits (63), Expect = 2.0
Identities = 11/35 (31%), Positives = 19/35 (54%)
Frame = -3
Query: 334 CSACNKLFKNVKSFENHENSKKHKENVAKMTLDDD 230
C+ACN FK + H +SK H+ ++ + +D
Sbjct: 1369 CTACNFSFKTKGNLTKHLSSKTHQRRISNIQAGND 1403
>Z68108-8|CAF31488.1| 1509|Caenorhabditis elegans Hypothetical protein
T05A10.1j protein.
Length = 1509
Score = 29.5 bits (63), Expect = 2.0
Identities = 11/35 (31%), Positives = 19/35 (54%)
Frame = -3
Query: 334 CSACNKLFKNVKSFENHENSKKHKENVAKMTLDDD 230
C+ACN FK + H +SK H+ ++ + +D
Sbjct: 1369 CTACNFSFKTKGNLTKHLSSKTHQRRISNIQAGND 1403
>Z68108-7|CAF31487.1| 1692|Caenorhabditis elegans Hypothetical protein
T05A10.1c protein.
Length = 1692
Score = 29.5 bits (63), Expect = 2.0
Identities = 11/35 (31%), Positives = 19/35 (54%)
Frame = -3
Query: 334 CSACNKLFKNVKSFENHENSKKHKENVAKMTLDDD 230
C+ACN FK + H +SK H+ ++ + +D
Sbjct: 927 CTACNFSFKTKGNLTKHLSSKTHQRRISNIQAGND 961
>Z68108-6|CAF31486.1| 537|Caenorhabditis elegans Hypothetical
protein T05A10.1h protein.
Length = 537
Score = 29.5 bits (63), Expect = 2.0
Identities = 11/35 (31%), Positives = 19/35 (54%)
Frame = -3
Query: 334 CSACNKLFKNVKSFENHENSKKHKENVAKMTLDDD 230
C+ACN FK + H +SK H+ ++ + +D
Sbjct: 17 CTACNFSFKTKGNLTKHLSSKTHQRRISNIQAGND 51
>L17337-4|ABM74561.1| 217|Caenorhabditis elegans Hypothetical
protein ZK686.4 protein.
Length = 217
Score = 29.5 bits (63), Expect = 2.0
Identities = 10/28 (35%), Positives = 17/28 (60%)
Frame = -3
Query: 337 YCSACNKLFKNVKSFENHENSKKHKENV 254
YC C+ + K+ +F +H N K H+ N+
Sbjct: 91 YCDVCDCVVKDSINFLDHINGKNHQRNI 118
>AY390552-1|AAQ94964.1| 557|Caenorhabditis elegans SMA-9 class III
protein.
Length = 557
Score = 29.5 bits (63), Expect = 2.0
Identities = 11/35 (31%), Positives = 19/35 (54%)
Frame = -3
Query: 334 CSACNKLFKNVKSFENHENSKKHKENVAKMTLDDD 230
C+ACN FK + H +SK H+ ++ + +D
Sbjct: 417 CTACNFSFKTKGNLTKHLSSKTHQRRISNIQAGND 451
>AY390551-1|AAQ94963.1| 926|Caenorhabditis elegans SMA-9 class IIc
protein.
Length = 926
Score = 29.5 bits (63), Expect = 2.0
Identities = 11/35 (31%), Positives = 19/35 (54%)
Frame = -3
Query: 334 CSACNKLFKNVKSFENHENSKKHKENVAKMTLDDD 230
C+ACN FK + H +SK H+ ++ + +D
Sbjct: 368 CTACNFSFKTKGNLTKHLSSKTHQRRISNIQAGND 402
>AY390550-1|AAQ94962.1| 537|Caenorhabditis elegans SMA-9 class IIb
protein.
Length = 537
Score = 29.5 bits (63), Expect = 2.0
Identities = 11/35 (31%), Positives = 19/35 (54%)
Frame = -3
Query: 334 CSACNKLFKNVKSFENHENSKKHKENVAKMTLDDD 230
C+ACN FK + H +SK H+ ++ + +D
Sbjct: 17 CTACNFSFKTKGNLTKHLSSKTHQRRISNIQAGND 51
>AY390545-1|AAQ94957.1| 792|Caenorhabditis elegans SMA-9 class IIb
protein.
Length = 792
Score = 29.5 bits (63), Expect = 2.0
Identities = 11/35 (31%), Positives = 19/35 (54%)
Frame = -3
Query: 334 CSACNKLFKNVKSFENHENSKKHKENVAKMTLDDD 230
C+ACN FK + H +SK H+ ++ + +D
Sbjct: 272 CTACNFSFKTKGNLTKHLSSKTHQRRISNIQAGND 306
>Z35663-13|CAA84729.1| 234|Caenorhabditis elegans Hypothetical
protein T04A8.10 protein.
Length = 234
Score = 29.1 bits (62), Expect = 2.6
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = -3
Query: 343 NLYCSACNKLFKNVKSFENHENSKKHKENVAKM 245
N+ C CN K K + H N KKH++++ K+
Sbjct: 15 NIQCLVCNAEIKP-KIWTAHVNGKKHRDSIEKL 46
>Z81556-2|CAB04525.2| 445|Caenorhabditis elegans Hypothetical
protein F58G1.2 protein.
Length = 445
Score = 28.3 bits (60), Expect = 4.6
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = -3
Query: 334 CSACNKLFKNVKSFENHENSKKHKE 260
C C+K F+N SF NH +KKH E
Sbjct: 231 CPFCDKRFRNDISFNNH-LTKKHPE 254
>AL110501-2|CAE47474.1| 1271|Caenorhabditis elegans Hypothetical
protein Y79H2A.3b protein.
Length = 1271
Score = 28.3 bits (60), Expect = 4.6
Identities = 14/37 (37%), Positives = 19/37 (51%), Gaps = 2/37 (5%)
Frame = -3
Query: 337 YCSACNKLFKNVKSFENHENSKKH--KENVAKMTLDD 233
YC AC +F + K H SK+H K N+ K D+
Sbjct: 14 YCIACRSIFASEKEKLEHRASKRHVKKWNLHKFFRDE 50
>AL110501-1|CAB54509.1| 2129|Caenorhabditis elegans Hypothetical
protein Y79H2A.3a protein.
Length = 2129
Score = 28.3 bits (60), Expect = 4.6
Identities = 14/37 (37%), Positives = 19/37 (51%), Gaps = 2/37 (5%)
Frame = -3
Query: 337 YCSACNKLFKNVKSFENHENSKKH--KENVAKMTLDD 233
YC AC +F + K H SK+H K N+ K D+
Sbjct: 14 YCIACRSIFASEKEKLEHRASKRHVKKWNLHKFFRDE 50
>AF039710-9|AAB96685.2| 172|Caenorhabditis elegans Hypothetical
protein C46E10.8 protein.
Length = 172
Score = 27.9 bits (59), Expect = 6.0
Identities = 10/28 (35%), Positives = 18/28 (64%)
Frame = -3
Query: 334 CSACNKLFKNVKSFENHENSKKHKENVA 251
C AC++++ + KS ++H S K+ VA
Sbjct: 31 CKACSRIYASRKSLKSHLKSYKYAREVA 58
>U80441-11|AAB37660.3| 1037|Caenorhabditis elegans Hypothetical
protein F27C1.11 protein.
Length = 1037
Score = 27.5 bits (58), Expect = 8.0
Identities = 13/34 (38%), Positives = 17/34 (50%)
Frame = -2
Query: 122 EDEKEPLGNSTSDIEDNDIRETLSDDSGKVKPLP 21
EDEK + N T D ED+ E DD ++ P
Sbjct: 452 EDEKHDMMNGTIDEEDSGNEEVDDDDDESLRETP 485
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,740,943
Number of Sequences: 27780
Number of extensions: 151688
Number of successful extensions: 617
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 611
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 617
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1321669750
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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