Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1981
         (612 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.      26   0.33 
DQ435330-1|ABD92645.1|  132|Apis mellifera OBP13 protein.              23   2.4  
EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase p...    21   9.5  

>AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.
          Length = 429

 Score = 25.8 bits (54), Expect = 0.33
 Identities = 7/19 (36%), Positives = 14/19 (73%)
 Frame = -3

Query: 334 CSACNKLFKNVKSFENHEN 278
           C+ C+K+F+ + S  NH++
Sbjct: 404 CALCHKVFRTLNSLNNHKS 422


>DQ435330-1|ABD92645.1|  132|Apis mellifera OBP13 protein.
          Length = 132

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 11/21 (52%), Positives = 15/21 (71%)
 Frame = -3

Query: 535 SDEYQKKLSEIESLLAEEFGL 473
           S+E   KL +IES+ AEE G+
Sbjct: 19  SEESINKLRKIESVCAEENGI 39


>EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase
           protein.
          Length = 620

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 9/18 (50%), Positives = 9/18 (50%)
 Frame = +1

Query: 532 HFVKMKIPLPFSWLPQFP 585
           H     IPLP   LP FP
Sbjct: 219 HSSSFCIPLPVRVLPNFP 236


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 117,135
Number of Sequences: 438
Number of extensions: 1791
Number of successful extensions: 8
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18093444
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)