Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1980
(701 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_04_0385 - 24858580-24858721,24858772-24858850,24859155-248593... 74 1e-13
01_06_0756 - 31731607-31731752,31732368-31732467,31732716-317329... 73 2e-13
02_04_0575 - 24000191-24000302,24000710-24000788,24001017-240011... 67 1e-11
03_05_0049 - 20277234-20277251,20277670-20277795,20278085-202781... 65 4e-11
01_01_1145 + 9073973-9074281,9075440-9075998,9076088-9076241,907... 65 4e-11
12_01_0752 - 6798938-6799312,6799628-6799768,6800257-6800325,680... 63 2e-10
11_02_0065 - 7938007-7938393,7939292-7939435,7940597-7940665,794... 62 5e-10
08_02_1446 + 27156449-27156790,27157961-27158042,27158698-271587... 62 5e-10
03_01_0389 + 3021849-3022136,3022237-3022753,3022835-3022988,302... 59 3e-09
03_06_0758 - 36052261-36052301,36052463-36052697,36052895-360529... 51 1e-06
07_01_0023 - 154119-154541,154697-154741,154875-154922,156104-15... 50 2e-06
09_06_0123 - 20997498-20997512,20998015-20998100,20999066-209991... 46 3e-05
10_08_0151 - 15229235-15229243,15230032-15230103,15230369-152304... 45 7e-05
12_02_0652 - 21527768-21528328,21528980-21529738,21530151-215302... 30 2.0
02_02_0565 + 11550071-11550909,11551603-11553133,11553205-11553537 29 2.7
12_01_0313 + 2388488-2388560,2389285-2389462,2390221-2390331,239... 29 3.6
12_01_0222 - 1675077-1675289,1675476-1675553,1675943-1676002,167... 27 3.8
11_01_0221 - 1720952-1721164,1721351-1721428,1721836-1721895,172... 27 3.8
12_02_0126 + 13958247-13958298,13958422-13958972,13959076-13960047 29 4.7
12_01_0645 - 5468344-5470266 29 4.7
05_02_0043 + 5964749-5966406,5966725-5966791,5967174-5967329,596... 29 4.7
08_02_0243 - 14708055-14708416,14708487-14709324,14709482-147103... 28 6.2
06_01_0314 + 2255908-2255979,2256354-2256512,2257021-2257209,225... 28 6.2
10_01_0013 + 154098-154101,154513-154673,154773-154847,155071-15... 28 8.3
06_03_1362 + 29571324-29571564,29571746-29571921,29571972-295722... 28 8.3
>04_04_0385 -
24858580-24858721,24858772-24858850,24859155-24859302,
24859939-24860239,24860327-24860407,24860727-24860875,
24861073-24861215,24861404-24861556,24861664-24861742,
24861851-24861916
Length = 446
Score = 74.1 bits (174), Expect = 1e-13
Identities = 48/142 (33%), Positives = 84/142 (59%), Gaps = 12/142 (8%)
Frame = +1
Query: 217 IIRQVEYYFGDVNLHRDKFLQEQI-KLDDGWVPLEILTKFNRLAK-LTEDTDVIANALNK 390
++RQVE+YF D NL RD FL++ + + +DG V L ++ F+R+ K L D DV + +
Sbjct: 19 VLRQVEFYFSDSNLPRDNFLRKTVEESEDGLVSLALICSFSRMKKHLGLDLDVKQETMPE 78
Query: 391 ST----------SGLLEVSEDNKKVRRNPEQPLPEMNEELRKEICNRSIYAKGFAKDASL 540
T S L V+ED KKV R+ E L ++ +E+ +++ +R+I A F + L
Sbjct: 79 ETVLAVAEVLRRSSALRVTEDGKKVGRSIE--LSKL-DEIMEQVDSRTIAASPFPYNVKL 135
Query: 541 DDLLNYFKQFQEVENVIMRRYV 606
+D+ ++F Q+ +V +V + R++
Sbjct: 136 EDVQSFFAQYGKVNSVRLPRHI 157
>01_06_0756 -
31731607-31731752,31732368-31732467,31732716-31732943,
31733390-31733474,31733583-31733662,31733755-31733826,
31733964-31734058,31735442-31735523,31735646-31735927
Length = 389
Score = 73.3 bits (172), Expect = 2e-13
Identities = 45/125 (36%), Positives = 71/125 (56%), Gaps = 1/125 (0%)
Frame = +1
Query: 217 IIRQVEYYFGDVNLHRDKFLQEQIKLD-DGWVPLEILTKFNRLAKLTEDTDVIANALNKS 393
I++QVEYYF D NL D+FL + +K + G+VP+ ++ F R+ KL++D +I AL
Sbjct: 91 IVKQVEYYFSDENLPTDEFLIKFVKKNKQGFVPIGVIASFRRMKKLSQDLSIIEAALR-- 148
Query: 394 TSGLLEVSEDNKKVRRNPEQPLPEMNEELRKEICNRSIYAKGFAKDASLDDLLNYFKQFQ 573
TS L VS D K+VRR PLP N EL ++ R + + D S++ + F+
Sbjct: 149 TSSKLVVSPDGKRVRR--LHPLP--NNEL-NDVKKRIVVVENLPSDFSMESIHAKFETVG 203
Query: 574 EVENV 588
++ +
Sbjct: 204 KIAKI 208
>02_04_0575 -
24000191-24000302,24000710-24000788,24001017-24001164,
24001704-24002100,24002188-24002268,24002688-24002836,
24003152-24003294,24003643-24003795,24003912-24003990,
24004113-24004175
Length = 467
Score = 66.9 bits (156), Expect = 1e-11
Identities = 46/142 (32%), Positives = 79/142 (55%), Gaps = 12/142 (8%)
Frame = +1
Query: 217 IIRQVEYYFGDVNLHRDKFLQEQI-KLDDGWVPLEILTKFNRL-------AKLTEDT--- 363
++RQVE+YF D NL RDKFL+E + + +DG V L ++ F R+ A + +T
Sbjct: 18 VLRQVEFYFSDSNLPRDKFLRETVEQREDGLVSLALICSFARMKSHLGLDAAVKPETVPE 77
Query: 364 -DVIANALNKSTSGLLEVSEDNKKVRRNPEQPLPEMNEELRKEICNRSIYAKGFAKDASL 540
V+A A S +L +SED K V R E +E+ K++ +R++ A + L
Sbjct: 78 ETVLAVAEVLRRSQMLRISEDGKMVGRASEL---LKADEIIKQVDSRTVAASPLPYNVKL 134
Query: 541 DDLLNYFKQFQEVENVIMRRYV 606
+D+ ++F Q+ +V +V + R++
Sbjct: 135 EDVQSFFAQYAKVNSVRLPRHI 156
>03_05_0049 -
20277234-20277251,20277670-20277795,20278085-20278153,
20278233-20278280,20278413-20278494,20278583-20278662,
20278764-20278835,20278912-20279006,20280396-20280477,
20280604-20280963
Length = 343
Score = 65.3 bits (152), Expect = 4e-11
Identities = 41/125 (32%), Positives = 70/125 (56%), Gaps = 1/125 (0%)
Frame = +1
Query: 217 IIRQVEYYFGDVNLHRDKFLQEQIKLD-DGWVPLEILTKFNRLAKLTEDTDVIANALNKS 393
II+QVEY F D NL + FL + + D + +VP+ +++ + ++ + ++ NAL
Sbjct: 117 IIKQVEYQFSDTNLVANDFLMKIMNKDPECYVPMSVISSWKKIKAMGVTNQLLVNALR-- 174
Query: 394 TSGLLEVSEDNKKVRRNPEQPLPEMNEELRKEICNRSIYAKGFAKDASLDDLLNYFKQFQ 573
TS L VS+D KKVRR QP E ++E E+ +R + A+ +D++ + L F
Sbjct: 175 TSSKLVVSDDGKKVRR--AQPFTERHKE---ELQSRMVIAENLPEDSTRNSLEKIFGIIG 229
Query: 574 EVENV 588
V+N+
Sbjct: 230 SVKNI 234
>01_01_1145 +
9073973-9074281,9075440-9075998,9076088-9076241,
9077475-9077565,9077722-9077793,9077879-9078390,
9078854-9078923,9079514-9079579,9080266-9080570,
9080872-9081006,9081141-9081204,9081429-9081574,
9081669-9081773,9082310-9082490
Length = 922
Score = 65.3 bits (152), Expect = 4e-11
Identities = 34/74 (45%), Positives = 45/74 (60%)
Frame = +1
Query: 217 IIRQVEYYFGDVNLHRDKFLQEQIKLDDGWVPLEILTKFNRLAKLTEDTDVIANALNKST 396
I+ QVEYYF D NL D FL+ + + GWVP+ + FNRL K+T D +I AL +
Sbjct: 332 ILTQVEYYFSDSNLDHDNFLKSLMD-EHGWVPISKVADFNRLKKMTTDIQLIVEAL--AN 388
Query: 397 SGLLEVSEDNKKVR 438
S LLEV + N + R
Sbjct: 389 SSLLEVQDGNMRRR 402
>12_01_0752 -
6798938-6799312,6799628-6799768,6800257-6800325,
6800407-6800454,6801740-6801836,6801922-6802001,
6802099-6802170,6802335-6802429,6802853-6802934,
6805476-6805853
Length = 478
Score = 63.3 bits (147), Expect = 2e-10
Identities = 38/125 (30%), Positives = 66/125 (52%), Gaps = 1/125 (0%)
Frame = +1
Query: 217 IIRQVEYYFGDVNLHRDKFLQEQIKLD-DGWVPLEILTKFNRLAKLTEDTDVIANALNKS 393
I +QVEYYF D+NL + L I D +G+VP+ ++ FN++ L + ++A AL
Sbjct: 123 ITKQVEYYFSDINLATTEHLMRFITKDPEGYVPITVIAGFNKIKALVHNNSMLAAALR-- 180
Query: 394 TSGLLEVSEDNKKVRRNPEQPLPEMNEELRKEICNRSIYAKGFAKDASLDDLLNYFKQFQ 573
TS L VS+D K+V+R + +M +++ +R + A+ D +L+ F
Sbjct: 181 TSSKLVVSDDGKRVKRLQSFTVSDM-----QDLQSRIVVAENLPGDPCYQNLMKIFSTVG 235
Query: 574 EVENV 588
V+ +
Sbjct: 236 SVKTI 240
>11_02_0065 -
7938007-7938393,7939292-7939435,7940597-7940665,
7940762-7940809,7941488-7941584,7941688-7941767,
7941841-7941912,7942256-7942350,7943903-7943984,
7945176-7945209,7945255-7945262,7945657-7946058
Length = 505
Score = 61.7 bits (143), Expect = 5e-10
Identities = 39/125 (31%), Positives = 65/125 (52%), Gaps = 1/125 (0%)
Frame = +1
Query: 217 IIRQVEYYFGDVNLHRDKFLQEQIKLD-DGWVPLEILTKFNRLAKLTEDTDVIANALNKS 393
++ +VEYYF D+NL + L I D +G+VP+ ++ F ++ L + ++A+AL
Sbjct: 145 VVPKVEYYFSDINLATTEHLMRFITKDPEGYVPISVVAGFKKIKALIQSNAMLASALR-- 202
Query: 394 TSGLLEVSEDNKKVRRNPEQPLPEMNEELRKEICNRSIYAKGFAKDASLDDLLNYFKQFQ 573
TS L VS D +V+R EQP E + E E+ R + A+ D +L+ F
Sbjct: 203 TSSKLVVSNDGTRVKR--EQPFTESDLE---ELQARIVVAENLPDDHCYQNLMKLFSTVG 257
Query: 574 EVENV 588
V+ +
Sbjct: 258 SVKTI 262
>08_02_1446 +
27156449-27156790,27157961-27158042,27158698-27158792,
27159421-27159492,27159572-27159651,27159728-27159827,
27160064-27160141,27160408-27160455,27160570-27160638,
27161035-27161175,27161262-27161516
Length = 453
Score = 61.7 bits (143), Expect = 5e-10
Identities = 36/125 (28%), Positives = 67/125 (53%), Gaps = 1/125 (0%)
Frame = +1
Query: 217 IIRQVEYYFGDVNLHRDKFLQE-QIKLDDGWVPLEILTKFNRLAKLTEDTDVIANALNKS 393
+++QVE+YF DVNL + L + I+ +G+VP+ ++ F ++ +L + +A L
Sbjct: 111 VVKQVEFYFSDVNLATTEHLMKFMIRDPEGFVPMSVVASFRKIRELVSERSALAAVLR-- 168
Query: 394 TSGLLEVSEDNKKVRRNPEQPLPEMNEELRKEICNRSIYAKGFAKDASLDDLLNYFKQFQ 573
TS L VS+D K+VRR E +E+ +R + A+ ++ +L+ F F
Sbjct: 169 TSAELVVSDDGKRVRRR-----VLFTEADAEEVQSRIVVAENLREEHRYPNLMKIFSAFG 223
Query: 574 EVENV 588
V+++
Sbjct: 224 SVKSI 228
>03_01_0389 +
3021849-3022136,3022237-3022753,3022835-3022988,
3023076-3023166,3024556-3024627,3026366-3026689
Length = 481
Score = 59.3 bits (137), Expect = 3e-09
Identities = 30/78 (38%), Positives = 47/78 (60%)
Frame = +1
Query: 217 IIRQVEYYFGDVNLHRDKFLQEQIKLDDGWVPLEILTKFNRLAKLTEDTDVIANALNKST 396
+++Q+EYYF D NL +D FL+ + D GWVPL ++ FN++ KLT + I + +ST
Sbjct: 311 LLKQIEYYFSDDNLCKDIFLRRHMD-DQGWVPLPLIAGFNQVKKLTNNVQFILETVLQST 369
Query: 397 SGLLEVSEDNKKVRRNPE 450
++EV D + R E
Sbjct: 370 --VVEVQGDKLRKRERWE 385
>03_06_0758 -
36052261-36052301,36052463-36052697,36052895-36052966,
36056477-36056567,36056650-36056872,36056964-36057300,
36057406-36057588
Length = 393
Score = 50.8 bits (116), Expect = 1e-06
Identities = 25/75 (33%), Positives = 46/75 (61%)
Frame = +1
Query: 217 IIRQVEYYFGDVNLHRDKFLQEQIKLDDGWVPLEILTKFNRLAKLTEDTDVIANALNKST 396
+++Q+E+YF NL D FL+ + D GWV + ++ FN++ + T+D I + + +
Sbjct: 239 LLKQIEFYFSKDNLCTDVFLRRNMD-DQGWVNIALIAGFNKVQESTDDLQYIKDTI--QS 295
Query: 397 SGLLEVSEDNKKVRR 441
S +LE+ +D K+RR
Sbjct: 296 SSILEMQDD--KIRR 308
>07_01_0023 -
154119-154541,154697-154741,154875-154922,156104-156185,
156365-156444,156606-156677,156827-156921,157479-157515
Length = 293
Score = 49.6 bits (113), Expect = 2e-06
Identities = 37/113 (32%), Positives = 57/113 (50%)
Frame = +1
Query: 280 EQIKLDDGWVPLEILTKFNRLAKLTEDTDVIANALNKSTSGLLEVSEDNKKVRRNPEQPL 459
+Q + G VPL ++ + ++ L ++ AL ST L VS+D KKVRR QP
Sbjct: 5 QQESISSG-VPLSVIASWKKIKSLGATNQMLVKALRTSTK--LIVSDDGKKVRR--RQPF 59
Query: 460 PEMNEELRKEICNRSIYAKGFAKDASLDDLLNYFKQFQEVENVIMRRYVEKST 618
E ++E E+ +R I A+ +D+S + L F V+N+ M E ST
Sbjct: 60 TEKHKE---ELQSRMIIAENLPEDSSRNSLEKIFGVVGSVKNIKMCHPQEPST 109
>09_06_0123 -
20997498-20997512,20998015-20998100,20999066-20999198,
20999264-20999341,21000130-21000216,21001164-21001254,
21001338-21001488,21001567-21002296,21002404-21002820
Length = 595
Score = 46.0 bits (104), Expect = 3e-05
Identities = 20/40 (50%), Positives = 28/40 (70%)
Frame = +1
Query: 226 QVEYYFGDVNLHRDKFLQEQIKLDDGWVPLEILTKFNRLA 345
Q+E+YF NL D FL+ Q+ D GWV ++++TKFNR A
Sbjct: 427 QIEFYFSTNNLCHDTFLRRQMD-DQGWVHIDVITKFNREA 465
>10_08_0151 -
15229235-15229243,15230032-15230103,15230369-15230459,
15230553-15230695,15231910-15232022,15232171-15232315
Length = 190
Score = 44.8 bits (101), Expect = 7e-05
Identities = 22/60 (36%), Positives = 34/60 (56%)
Frame = +1
Query: 217 IIRQVEYYFGDVNLHRDKFLQEQIKLDDGWVPLEILTKFNRLAKLTEDTDVIANALNKST 396
I Q+EYYF + NL D +L+ + GWVPL ++ F R+ LT D + + ++ ST
Sbjct: 125 IREQIEYYFSENNLCSDVYLKGWMN-QQGWVPLTLVAGFPRVQALTTDYETVQRSVLSST 183
>12_02_0652 - 21527768-21528328,21528980-21529738,21530151-21530216,
21530550-21530598,21530717-21530817,21531469-21531540,
21531630-21531746,21531870-21531959,21532224-21532319,
21532429-21532482,21533210-21533290,21533382-21533581,
21533677-21533804,21533943-21533995,21534312-21534374
Length = 829
Score = 29.9 bits (64), Expect = 2.0
Identities = 29/121 (23%), Positives = 52/121 (42%), Gaps = 1/121 (0%)
Frame = +1
Query: 280 EQIKLDDGWVPLEILTKFNRLAKLTEDTDVIANALNKSTSGLLEVSEDNKKVRRNPEQPL 459
E ++ + + E + N AKL D +++A N + + K +R+ P
Sbjct: 695 EALRAEHTQIEAEASNQRNLAAKLESDLKSLSDAYNSLEQANFRLDSEVKALRQGGSAPY 754
Query: 460 PEMNEELRKEICNRSIYAKGFAKDASLDDLLNYFKQFQ-EVENVIMRRYVEKSTKETLVQ 636
P++ E ++ E + +A L+DLL Q Q +VE + R +TL+Q
Sbjct: 755 PDV-EAIKAEAKEEA----EKESEAELNDLLVCLGQEQSKVEKLSTRLAELGEDVDTLLQ 809
Query: 637 G 639
G
Sbjct: 810 G 810
>02_02_0565 + 11550071-11550909,11551603-11553133,11553205-11553537
Length = 900
Score = 29.5 bits (63), Expect = 2.7
Identities = 21/74 (28%), Positives = 34/74 (45%)
Frame = +1
Query: 337 RLAKLTEDTDVIANALNKSTSGLLEVSEDNKKVRRNPEQPLPEMNEELRKEICNRSIYAK 516
R +L D +V+ K L ++ + + + E+ L + + L K RS+YA
Sbjct: 692 RTIRLPNDPNVV-----KEIGALAQLQTLDITILNSSEEVLANLADALDKTNNLRSLYAY 746
Query: 517 GFAKDASLDDLLNY 558
G KD D LLN+
Sbjct: 747 GTGKDEHKDRLLNF 760
>12_01_0313 +
2388488-2388560,2389285-2389462,2390221-2390331,
2391280-2391362,2391826-2392027,2392078-2392101,
2392234-2392408,2392482-2392683,2393897-2394036
Length = 395
Score = 29.1 bits (62), Expect = 3.6
Identities = 12/38 (31%), Positives = 26/38 (68%), Gaps = 1/38 (2%)
Frame = +2
Query: 104 RKIKMTEDKEVTVETNGQEE-NAKTENSEDETELDIGP 214
++++++E+K+ T+E N +++ +A TE +DE L P
Sbjct: 126 QQLQVSEEKDTTIEENSEKKWHAHTEIEDDENVLSKSP 163
>12_01_0222 -
1675077-1675289,1675476-1675553,1675943-1676002,
1676103-1676206,1676321-1676479,1676768-1676894,
1677569-1677736,1677890-1678000,1678090-1678243,
1678409-1678744,1678854-1679038,1679141-1679239,
1679376-1679639,1679776-1679952,1680351-1680644,
1680753-1680920,1681574-1681918,1682002-1682171,
1682272-1682422,1683296-1683365,1683456-1683640,
1683999-1684092,1684195-1684313,1684658-1684717,
1684844-1684930,1685631-1685717,1685905-1686013,
1686105-1686183,1686350-1686437,1686611-1686675,
1687570-1687722,1688514-1688620,1688702-1688784,
1688926-1689016,1689095-1689231,1689612-1689701,
1689795-1689962,1690366-1690560
Length = 1809
Score = 26.6 bits (56), Expect(2) = 3.8
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = +1
Query: 589 IMRRYVEKSTKETLVQGFCICYIQ 660
+ R Y E ST T+V+ FCI YI+
Sbjct: 90 LWRIYTE-STSSTIVRNFCIVYIE 112
Score = 20.6 bits (41), Expect(2) = 3.8
Identities = 8/20 (40%), Positives = 13/20 (65%)
Frame = +1
Query: 412 VSEDNKKVRRNPEQPLPEMN 471
+S NK+V+ PE LP ++
Sbjct: 70 LSHINKRVKHRPEISLPMLD 89
>11_01_0221 -
1720952-1721164,1721351-1721428,1721836-1721895,
1721996-1722099,1722214-1722372,1722668-1722794,
1723469-1723636,1723789-1723899,1723989-1724142,
1724308-1724643,1724753-1724937,1725040-1725138,
1725275-1725538,1725674-1725850,1726249-1726542,
1726649-1726816,1727473-1727817,1727901-1728070,
1728171-1728321,1729193-1729262,1729353-1729537,
1729896-1729989,1730094-1730212,1730558-1730617,
1730744-1730830,1732348-1732434,1732622-1732730,
1732822-1732900,1733067-1733154,1733328-1733392,
1734287-1734439,1735231-1735337,1735419-1735501,
1735643-1735733,1735812-1735948,1736118-1736207,
1736301-1736468,1736875-1737057
Length = 1805
Score = 26.6 bits (56), Expect(2) = 3.8
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = +1
Query: 589 IMRRYVEKSTKETLVQGFCICYIQ 660
+ R Y E ST T+V+ FCI YI+
Sbjct: 86 LWRIYTE-STSSTIVRNFCIVYIE 108
Score = 20.6 bits (41), Expect(2) = 3.8
Identities = 8/20 (40%), Positives = 13/20 (65%)
Frame = +1
Query: 412 VSEDNKKVRRNPEQPLPEMN 471
+S NK+V+ PE LP ++
Sbjct: 66 LSHINKRVKHRPEISLPMLD 85
>12_02_0126 + 13958247-13958298,13958422-13958972,13959076-13960047
Length = 524
Score = 28.7 bits (61), Expect = 4.7
Identities = 12/51 (23%), Positives = 26/51 (50%)
Frame = +1
Query: 427 KKVRRNPEQPLPEMNEELRKEICNRSIYAKGFAKDASLDDLLNYFKQFQEV 579
KK NPE P+P +E++++E+ + A L++ + + Q++
Sbjct: 468 KKFEENPEAPVPSADEDVKQEMAANPLAAISAPLGFYLENAIQALQAIQKI 518
>12_01_0645 - 5468344-5470266
Length = 640
Score = 28.7 bits (61), Expect = 4.7
Identities = 25/87 (28%), Positives = 40/87 (45%)
Frame = +1
Query: 364 DVIANALNKSTSGLLEVSEDNKKVRRNPEQPLPEMNEELRKEICNRSIYAKGFAKDASLD 543
+VIAN ++K++S L + ++ R LP+M + L S G D SL
Sbjct: 13 EVIANLIDKASSYLGSNPDRLQESMRMLRLKLPKMRDTLIPAQSRESYSGLGVLLDESLW 72
Query: 544 DLLNYFKQFQEVENVIMRRYVEKSTKE 624
L + ++ ++ V Y EK TKE
Sbjct: 73 RLRDAVEELEDA--VDEHAYHEKKTKE 97
>05_02_0043 +
5964749-5966406,5966725-5966791,5967174-5967329,
5967782-5967865,5968020-5968073
Length = 672
Score = 28.7 bits (61), Expect = 4.7
Identities = 21/83 (25%), Positives = 37/83 (44%)
Frame = +1
Query: 238 YFGDVNLHRDKFLQEQIKLDDGWVPLEILTKFNRLAKLTEDTDVIANALNKSTSGLLEVS 417
Y GD+ +++ KFL Q L DG L L+++N + + + +K+ G L
Sbjct: 116 YSGDIKMNKRKFL--QTLLLDGCFVLVSLSQYNEFLWPDSLRYIPSPSNDKTFEGALSFG 173
Query: 418 EDNKKVRRNPEQPLPEMNEELRK 486
+ K RN Q + + + K
Sbjct: 174 DHQKVTGRNESQQVNKGKQSAMK 196
>08_02_0243 -
14708055-14708416,14708487-14709324,14709482-14710323,
14710466-14710520,14711535-14711549,14713030-14713033,
14713340-14713424,14714045-14714084
Length = 746
Score = 28.3 bits (60), Expect = 6.2
Identities = 12/43 (27%), Positives = 23/43 (53%)
Frame = -1
Query: 377 FAMTSVSSVSLARRLNFVRISNGTHPSSNFICSCRNLSRCRFT 249
F + + S+S RRL +++ + P+S +C+ R+L T
Sbjct: 635 FRLDELDSLSKIRRLLLIKLEKASPPASPVLCNKRHLKELGLT 677
>06_01_0314 +
2255908-2255979,2256354-2256512,2257021-2257209,
2257390-2257561,2257711-2257784,2257818-2257904,
2257975-2257998,2258100-2258225
Length = 300
Score = 28.3 bits (60), Expect = 6.2
Identities = 13/40 (32%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Frame = +1
Query: 214 GIIRQVEYYFGDVNLHRDKFLQEQIK-LDDGWVPLEILTK 330
G+++Q+E FG R++F++ + L GWV L + K
Sbjct: 162 GVLQQIEKDFGSFTNFREEFIRSALSLLGSGWVWLVLKRK 201
>10_01_0013 +
154098-154101,154513-154673,154773-154847,155071-155571,
155873-156214,158107-158234,158296-158342,160117-160196,
160569-160654,161409-161556,161947-162082,162160-162488,
162953-163169,164547-164572
Length = 759
Score = 27.9 bits (59), Expect = 8.3
Identities = 12/40 (30%), Positives = 21/40 (52%)
Frame = +1
Query: 529 DASLDDLLNYFKQFQEVENVIMRRYVEKSTKETLVQGFCI 648
D +D+L NY K + V+ ++ +K ++ GFCI
Sbjct: 262 DNLVDELWNYMKNGKLVQTAVLLLAAQKHIRKIKPDGFCI 301
>06_03_1362 +
29571324-29571564,29571746-29571921,29571972-29572251,
29572949-29573085,29573174-29573401
Length = 353
Score = 27.9 bits (59), Expect = 8.3
Identities = 23/99 (23%), Positives = 43/99 (43%), Gaps = 7/99 (7%)
Frame = +1
Query: 301 GWVPLEILTKFNRLAKLTEDTDVIANALNKSTSGLLEVSEDNK-----KVRRNPEQPLPE 465
GW T ++ K T++ +V A NK+ E D KV + PE+ +
Sbjct: 230 GWDVFNQKTLYDAYKKRTKNIEVDMEAYNKAKEADPEFYRDASSLQYGKVSKVPEENIDR 289
Query: 466 MNEELRKEICNRSIYA--KGFAKDASLDDLLNYFKQFQE 576
M EL++ R ++ + F +D +D + + + F +
Sbjct: 290 MVNELKERDEKRKAFSRRRKFHEDKDIDSINDRNEHFNK 328
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,244,814
Number of Sequences: 37544
Number of extensions: 304559
Number of successful extensions: 930
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 865
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 912
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1803843684
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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