Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1980
(701 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X13697-1|CAA31985.1| 408|Homo sapiens protein ( Human mRNA for ... 166 6e-41
J04205-1|AAA51885.1| 408|Homo sapiens La protein protein. 166 6e-41
BT009862-1|AAP88864.1| 408|Homo sapiens Sjogren syndrome antige... 166 6e-41
BC020818-1|AAH20818.1| 408|Homo sapiens Sjogren syndrome antige... 166 6e-41
BC001289-1|AAH01289.1| 408|Homo sapiens Sjogren syndrome antige... 166 6e-41
AC009967-1|AAY14868.1| 408|Homo sapiens unknown protein. 166 6e-41
M20328-1|AAA36577.1| 355|Homo sapiens protein ( Human ribonucle... 102 1e-21
BC066945-1|AAH66945.1| 582|Homo sapiens LARP7 protein protein. 73 1e-12
BC014018-1|AAH14018.1| 491|Homo sapiens La ribonucleoprotein do... 64 5e-10
BC009446-1|AAH09446.1| 491|Homo sapiens La ribonucleoprotein do... 64 5e-10
BC006082-1|AAH06082.1| 491|Homo sapiens La ribonucleoprotein do... 64 5e-10
AF443829-1|AAN76711.1| 491|Homo sapiens acheron protein. 64 5e-10
AF443828-1|AAN76710.1| 491|Homo sapiens acheron protein. 64 5e-10
DQ185046-1|ABD14426.1| 48|Homo sapiens Sjogren syndrome antige... 61 4e-09
AK002058-1|BAA92061.1| 491|Homo sapiens protein ( Homo sapiens ... 60 6e-09
BC001460-1|AAH01460.2| 1019|Homo sapiens La ribonucleoprotein do... 58 4e-08
AK091465-1|BAC03668.1| 816|Homo sapiens protein ( Homo sapiens ... 58 4e-08
AB018274-1|BAA34451.1| 1096|Homo sapiens KIAA0731 protein protein. 58 4e-08
BC110300-1|AAI10301.1| 335|Homo sapiens LARP2 protein protein. 54 4e-07
AK001240-1|BAA91576.1| 328|Homo sapiens protein ( Homo sapiens ... 54 7e-07
AK092764-1|BAC03970.1| 575|Homo sapiens protein ( Homo sapiens ... 53 1e-06
BC063479-1|AAH63479.1| 374|Homo sapiens LARP4 protein protein. 42 0.002
BC022377-1|AAH22377.1| 188|Homo sapiens LARP4 protein protein. 42 0.002
AY004310-1|AAF86614.1| 375|Homo sapiens c-Mpl binding protein p... 42 0.002
AK125113-1|BAC86052.1| 654|Homo sapiens protein ( Homo sapiens ... 42 0.002
M35261-1|AAA36652.1| 27|Homo sapiens protein ( Human SS-B/La p... 38 0.046
D86971-1|BAA13207.2| 751|Homo sapiens KIAA0217 protein. 38 0.046
BC131630-1|AAI31631.1| 738|Homo sapiens La ribonucleoprotein do... 38 0.046
AL359878-4|CAI13663.2| 738|Homo sapiens La ribonucleoprotein do... 38 0.046
AL157709-4|CAI39596.2| 738|Homo sapiens La ribonucleoprotein do... 38 0.046
X14684-1|CAA32815.1| 296|Homo sapiens La 4.1 protein protein. 37 0.080
AL365436-3|CAI16590.1| 1203|Homo sapiens cingulin protein. 32 1.7
AF263462-1|AAF74498.1| 1203|Homo sapiens cingulin protein. 32 1.7
AB037740-1|BAA92557.1| 1208|Homo sapiens KIAA1319 protein protein. 32 1.7
BC012010-1|AAH12010.1| 475|Homo sapiens serum amyloid A-like 1 ... 32 2.3
D89678-1|BAA22860.1| 271|Homo sapiens A+U-rich element RNA bind... 31 3.0
D89092-1|BAA24361.1| 301|Homo sapiens hnRNP JKTBP protein. 31 3.0
CR407623-1|CAG28551.1| 420|Homo sapiens HNRPDL protein. 31 3.0
BC071944-1|AAH71944.1| 420|Homo sapiens heterogeneous nuclear r... 31 3.0
BC011714-1|AAH11714.1| 420|Homo sapiens heterogeneous nuclear r... 31 3.0
BC007392-1|AAH07392.2| 415|Homo sapiens HNRPDL protein protein. 31 3.0
AY528715-1|AAT44400.1| 1016|Homo sapiens antigen MU-RMS-40.16A p... 31 3.0
AY453824-1|AAR17782.1| 298|Homo sapiens CArG binding factor pro... 31 3.0
AJ131693-1|CAB40713.1| 3908|Homo sapiens AKAP450 protein protein. 31 3.0
AJ010770-1|CAA09361.1| 3911|Homo sapiens Hyperion protein protein. 31 3.0
AF091711-1|AAD39719.1| 1773|Homo sapiens splice variant AKAP350 ... 31 3.0
AF083037-1|AAD22767.1| 3595|Homo sapiens A-kinase anchoring prot... 31 3.0
AC124016-2|AAY40914.1| 420|Homo sapiens unknown protein. 31 3.0
AC004013-1|AAB96867.2| 2058|Homo sapiens unknown protein. 31 3.0
AB066484-1|BAB62188.1| 244|Homo sapiens JKTBP1delta6 protein. 31 3.0
AB019691-1|BAA78718.1| 3899|Homo sapiens Centrosome- and Golgi-l... 31 3.0
AB018346-1|BAA34523.1| 1708|Homo sapiens KIAA0803 protein protein. 31 3.0
AB017019-1|BAA75241.1| 420|Homo sapiens JKTBP2 protein. 31 3.0
AB017018-2|BAA75240.1| 301|Homo sapiens JKTBP1 protein. 31 3.0
AB017018-1|BAA75239.1| 420|Homo sapiens JKTBP2 protein. 31 3.0
M99063-1|AAA35746.1| 638|Homo sapiens cytokeratin 2 protein. 30 7.0
M24398-1|AAA61185.1| 102|Homo sapiens PTMS protein. 30 7.0
BC128229-1|AAI28230.1| 101|Homo sapiens PTMS protein protein. 30 7.0
BC017025-1|AAH17025.2| 102|Homo sapiens parathymosin protein. 30 7.0
AJ564103-1|CAD91891.1| 638|Homo sapiens keratin 2p protein. 30 7.0
Z26653-1|CAA81394.1| 3110|Homo sapiens laminin M chain (merosin)... 30 9.2
X77225-1|CAA54442.1| 376|Homo sapiens TFIIA/alpha, p55 protein. 30 9.2
X75383-2|CAA53152.1| 337|Homo sapiens TFIIA protein. 30 9.2
X75383-1|CAA53151.1| 376|Homo sapiens TFIIA protein. 30 9.2
U66796-1|AAB18388.1| 3110|Homo sapiens laminin alpha 2 chain pro... 30 9.2
M69181-1|AAA99177.1| 1976|Homo sapiens non-muscle myosin B protein. 30 9.2
D14887-1|BAA03604.1| 376|Homo sapiens 'TFIIA-42' protein. 30 9.2
D14886-1|BAA03603.1| 337|Homo sapiens TFIIA-37 protein. 30 9.2
BC117691-1|AAI17692.1| 1976|Homo sapiens myosin, heavy chain 10,... 30 9.2
BC117690-1|AAI17691.1| 1976|Homo sapiens myosin, heavy chain 10,... 30 9.2
BC107156-1|AAI07157.1| 376|Homo sapiens general transcription f... 30 9.2
BC107155-1|AAI07156.1| 376|Homo sapiens general transcription f... 30 9.2
AL669984-2|CAI16682.1| 3122|Homo sapiens laminin, alpha 2 (meros... 30 9.2
AL590613-1|CAH70771.1| 3122|Homo sapiens laminin, alpha 2 (meros... 30 9.2
AL583853-1|CAH70492.1| 3122|Homo sapiens laminin, alpha 2 (meros... 30 9.2
AL513527-1|CAI15185.1| 3122|Homo sapiens laminin, alpha 2 (meros... 30 9.2
AL445439-1|CAH72952.1| 3122|Homo sapiens laminin, alpha 2 (meros... 30 9.2
AL356124-1|CAI22470.1| 3122|Homo sapiens laminin, alpha 2 (meros... 30 9.2
AJ628418-1|CAF31522.1| 600|Homo sapiens keratin 3 protein. 30 9.2
AC010582-2|AAF26776.1| 376|Homo sapiens TFIIA-42 protein. 30 9.2
AB210026-1|BAE06108.1| 2018|Homo sapiens MYH10 variant protein p... 30 9.2
>X13697-1|CAA31985.1| 408|Homo sapiens protein ( Human mRNA for
ribonucleoprotein SS-B/La. ).
Length = 408
Score = 166 bits (404), Expect = 6e-41
Identities = 75/138 (54%), Positives = 104/138 (75%)
Frame = +1
Query: 217 IIRQVEYYFGDVNLHRDKFLQEQIKLDDGWVPLEILTKFNRLAKLTEDTDVIANALNKST 396
I Q+EYYFGD NL RDKFL+EQIKLD+GWVPLEI+ KFNRL +LT D +VI AL+KS
Sbjct: 17 ICHQIEYYFGDFNLPRDKFLKEQIKLDEGWVPLEIMIKFNRLNRLTTDFNVIVEALSKSK 76
Query: 397 SGLLEVSEDNKKVRRNPEQPLPEMNEELRKEICNRSIYAKGFAKDASLDDLLNYFKQFQE 576
+ L+E+SED K+RR+P +PLPE+ +E + ++ NRS+Y KGF DA+LDD+ + + +
Sbjct: 77 AELMEISEDKTKIRRSPSKPLPEVTDEYKNDVKNRSVYIKGFPTDATLDDIKEWLEDKGQ 136
Query: 577 VENVIMRRYVEKSTKETL 630
V N+ MRR + K+ K ++
Sbjct: 137 VLNIQMRRTLHKAFKGSI 154
>J04205-1|AAA51885.1| 408|Homo sapiens La protein protein.
Length = 408
Score = 166 bits (404), Expect = 6e-41
Identities = 75/138 (54%), Positives = 104/138 (75%)
Frame = +1
Query: 217 IIRQVEYYFGDVNLHRDKFLQEQIKLDDGWVPLEILTKFNRLAKLTEDTDVIANALNKST 396
I Q+EYYFGD NL RDKFL+EQIKLD+GWVPLEI+ KFNRL +LT D +VI AL+KS
Sbjct: 17 ICHQIEYYFGDFNLPRDKFLKEQIKLDEGWVPLEIMIKFNRLNRLTTDFNVIVEALSKSK 76
Query: 397 SGLLEVSEDNKKVRRNPEQPLPEMNEELRKEICNRSIYAKGFAKDASLDDLLNYFKQFQE 576
+ L+E+SED K+RR+P +PLPE+ +E + ++ NRS+Y KGF DA+LDD+ + + +
Sbjct: 77 AELMEISEDKTKIRRSPSKPLPEVTDEYKNDVKNRSVYIKGFPTDATLDDIKEWLEDKGQ 136
Query: 577 VENVIMRRYVEKSTKETL 630
V N+ MRR + K+ K ++
Sbjct: 137 VLNIQMRRTLHKAFKGSI 154
>BT009862-1|AAP88864.1| 408|Homo sapiens Sjogren syndrome antigen B
(autoantigen La) protein.
Length = 408
Score = 166 bits (404), Expect = 6e-41
Identities = 75/138 (54%), Positives = 104/138 (75%)
Frame = +1
Query: 217 IIRQVEYYFGDVNLHRDKFLQEQIKLDDGWVPLEILTKFNRLAKLTEDTDVIANALNKST 396
I Q+EYYFGD NL RDKFL+EQIKLD+GWVPLEI+ KFNRL +LT D +VI AL+KS
Sbjct: 17 ICHQIEYYFGDFNLPRDKFLKEQIKLDEGWVPLEIMIKFNRLNRLTTDFNVIVEALSKSK 76
Query: 397 SGLLEVSEDNKKVRRNPEQPLPEMNEELRKEICNRSIYAKGFAKDASLDDLLNYFKQFQE 576
+ L+E+SED K+RR+P +PLPE+ +E + ++ NRS+Y KGF DA+LDD+ + + +
Sbjct: 77 AELMEISEDKTKIRRSPSKPLPEVTDEYKNDVKNRSVYIKGFPTDATLDDIKEWLEDKGQ 136
Query: 577 VENVIMRRYVEKSTKETL 630
V N+ MRR + K+ K ++
Sbjct: 137 VLNIQMRRTLHKAFKGSI 154
>BC020818-1|AAH20818.1| 408|Homo sapiens Sjogren syndrome antigen B
(autoantigen La) protein.
Length = 408
Score = 166 bits (404), Expect = 6e-41
Identities = 75/138 (54%), Positives = 104/138 (75%)
Frame = +1
Query: 217 IIRQVEYYFGDVNLHRDKFLQEQIKLDDGWVPLEILTKFNRLAKLTEDTDVIANALNKST 396
I Q+EYYFGD NL RDKFL+EQIKLD+GWVPLEI+ KFNRL +LT D +VI AL+KS
Sbjct: 17 ICHQIEYYFGDFNLPRDKFLKEQIKLDEGWVPLEIMIKFNRLNRLTTDFNVIVEALSKSK 76
Query: 397 SGLLEVSEDNKKVRRNPEQPLPEMNEELRKEICNRSIYAKGFAKDASLDDLLNYFKQFQE 576
+ L+E+SED K+RR+P +PLPE+ +E + ++ NRS+Y KGF DA+LDD+ + + +
Sbjct: 77 AELMEISEDKTKIRRSPSKPLPEVTDEYKNDVKNRSVYIKGFPTDATLDDIKEWLEDKGQ 136
Query: 577 VENVIMRRYVEKSTKETL 630
V N+ MRR + K+ K ++
Sbjct: 137 VLNIQMRRTLHKAFKGSI 154
>BC001289-1|AAH01289.1| 408|Homo sapiens Sjogren syndrome antigen B
(autoantigen La) protein.
Length = 408
Score = 166 bits (404), Expect = 6e-41
Identities = 75/138 (54%), Positives = 104/138 (75%)
Frame = +1
Query: 217 IIRQVEYYFGDVNLHRDKFLQEQIKLDDGWVPLEILTKFNRLAKLTEDTDVIANALNKST 396
I Q+EYYFGD NL RDKFL+EQIKLD+GWVPLEI+ KFNRL +LT D +VI AL+KS
Sbjct: 17 ICHQIEYYFGDFNLPRDKFLKEQIKLDEGWVPLEIMIKFNRLNRLTTDFNVIVEALSKSK 76
Query: 397 SGLLEVSEDNKKVRRNPEQPLPEMNEELRKEICNRSIYAKGFAKDASLDDLLNYFKQFQE 576
+ L+E+SED K+RR+P +PLPE+ +E + ++ NRS+Y KGF DA+LDD+ + + +
Sbjct: 77 AELMEISEDKTKIRRSPSKPLPEVTDEYKNDVKNRSVYIKGFPTDATLDDIKEWLEDKGQ 136
Query: 577 VENVIMRRYVEKSTKETL 630
V N+ MRR + K+ K ++
Sbjct: 137 VLNIQMRRTLHKAFKGSI 154
>AC009967-1|AAY14868.1| 408|Homo sapiens unknown protein.
Length = 408
Score = 166 bits (404), Expect = 6e-41
Identities = 75/138 (54%), Positives = 104/138 (75%)
Frame = +1
Query: 217 IIRQVEYYFGDVNLHRDKFLQEQIKLDDGWVPLEILTKFNRLAKLTEDTDVIANALNKST 396
I Q+EYYFGD NL RDKFL+EQIKLD+GWVPLEI+ KFNRL +LT D +VI AL+KS
Sbjct: 17 ICHQIEYYFGDFNLPRDKFLKEQIKLDEGWVPLEIMIKFNRLNRLTTDFNVIVEALSKSK 76
Query: 397 SGLLEVSEDNKKVRRNPEQPLPEMNEELRKEICNRSIYAKGFAKDASLDDLLNYFKQFQE 576
+ L+E+SED K+RR+P +PLPE+ +E + ++ NRS+Y KGF DA+LDD+ + + +
Sbjct: 77 AELMEISEDKTKIRRSPSKPLPEVTDEYKNDVKNRSVYIKGFPTDATLDDIKEWLEDKGQ 136
Query: 577 VENVIMRRYVEKSTKETL 630
V N+ MRR + K+ K ++
Sbjct: 137 VLNIQMRRTLHKAFKGSI 154
>M20328-1|AAA36577.1| 355|Homo sapiens protein ( Human
ribonucleoprotein (La) mRNA, 3' end. ).
Length = 355
Score = 102 bits (245), Expect = 1e-21
Identities = 46/101 (45%), Positives = 72/101 (71%)
Frame = +1
Query: 328 KFNRLAKLTEDTDVIANALNKSTSGLLEVSEDNKKVRRNPEQPLPEMNEELRKEICNRSI 507
+FNRL +LT D +VI AL+KS + L+E+SED K+RR+P +PLPE+ +E + ++ NRS+
Sbjct: 1 EFNRLNRLTTDFNVIVEALSKSKAELMEISEDKTKIRRSPSKPLPEVTDEYKNDVKNRSV 60
Query: 508 YAKGFAKDASLDDLLNYFKQFQEVENVIMRRYVEKSTKETL 630
Y KGF DA+LDD+ + + +V N+ MRR + K+ K ++
Sbjct: 61 YIKGFPTDATLDDIKEWLEDKGQVLNIQMRRTLHKAFKGSI 101
>BC066945-1|AAH66945.1| 582|Homo sapiens LARP7 protein protein.
Length = 582
Score = 72.9 bits (171), Expect = 1e-12
Identities = 37/84 (44%), Positives = 59/84 (70%), Gaps = 1/84 (1%)
Frame = +1
Query: 217 IIRQVEYYFGDVNLHRDKFLQEQI-KLDDGWVPLEILTKFNRLAKLTEDTDVIANALNKS 393
I +QV+++FGD NLH+D+FL+EQI K DG+V + +L FN++ KLT D +IA AL
Sbjct: 38 IAKQVDFWFGDANLHKDRFLREQIEKSRDGYVDISLLVSFNKMKKLTTDGKLIARALR-- 95
Query: 394 TSGLLEVSEDNKKVRRNPEQPLPE 465
+S ++E+ + ++RR ++PL E
Sbjct: 96 SSAVVELDLEGTRIRR--KKPLGE 117
>BC014018-1|AAH14018.1| 491|Homo sapiens La ribonucleoprotein
domain family, member 6 protein.
Length = 491
Score = 64.1 bits (149), Expect = 5e-10
Identities = 32/82 (39%), Positives = 53/82 (64%), Gaps = 1/82 (1%)
Frame = +1
Query: 217 IIRQVEYYFGDVNLHRDKFLQEQIKLDD-GWVPLEILTKFNRLAKLTEDTDVIANALNKS 393
++ Q+E+YF D NL +D FL + ++ + G+V +++LT F ++ LT D A+AL S
Sbjct: 96 LVDQIEFYFSDENLEKDAFLLKHVRRNKLGYVSVKLLTSFKKVKHLTRDWRTTAHALKYS 155
Query: 394 TSGLLEVSEDNKKVRRNPEQPL 459
+LE++ED++KVRR PL
Sbjct: 156 V--VLELNEDHRKVRRTTPVPL 175
>BC009446-1|AAH09446.1| 491|Homo sapiens La ribonucleoprotein
domain family, member 6 protein.
Length = 491
Score = 64.1 bits (149), Expect = 5e-10
Identities = 32/82 (39%), Positives = 53/82 (64%), Gaps = 1/82 (1%)
Frame = +1
Query: 217 IIRQVEYYFGDVNLHRDKFLQEQIKLDD-GWVPLEILTKFNRLAKLTEDTDVIANALNKS 393
++ Q+E+YF D NL +D FL + ++ + G+V +++LT F ++ LT D A+AL S
Sbjct: 96 LVDQIEFYFSDENLEKDAFLLKHVRRNKLGYVSVKLLTSFKKVKHLTRDWRTTAHALKYS 155
Query: 394 TSGLLEVSEDNKKVRRNPEQPL 459
+LE++ED++KVRR PL
Sbjct: 156 V--VLELNEDHRKVRRTTPVPL 175
>BC006082-1|AAH06082.1| 491|Homo sapiens La ribonucleoprotein
domain family, member 6 protein.
Length = 491
Score = 64.1 bits (149), Expect = 5e-10
Identities = 32/82 (39%), Positives = 53/82 (64%), Gaps = 1/82 (1%)
Frame = +1
Query: 217 IIRQVEYYFGDVNLHRDKFLQEQIKLDD-GWVPLEILTKFNRLAKLTEDTDVIANALNKS 393
++ Q+E+YF D NL +D FL + ++ + G+V +++LT F ++ LT D A+AL S
Sbjct: 96 LVDQIEFYFSDENLEKDAFLLKHVRRNKLGYVSVKLLTSFKKVKHLTRDWRTTAHALKYS 155
Query: 394 TSGLLEVSEDNKKVRRNPEQPL 459
+LE++ED++KVRR PL
Sbjct: 156 V--VLELNEDHRKVRRTTPVPL 175
>AF443829-1|AAN76711.1| 491|Homo sapiens acheron protein.
Length = 491
Score = 64.1 bits (149), Expect = 5e-10
Identities = 32/82 (39%), Positives = 53/82 (64%), Gaps = 1/82 (1%)
Frame = +1
Query: 217 IIRQVEYYFGDVNLHRDKFLQEQIKLDD-GWVPLEILTKFNRLAKLTEDTDVIANALNKS 393
++ Q+E+YF D NL +D FL + ++ + G+V +++LT F ++ LT D A+AL S
Sbjct: 96 LVDQIEFYFSDENLEKDAFLLKHVRRNKLGYVSVKLLTSFKKVKHLTRDWRTTAHALKYS 155
Query: 394 TSGLLEVSEDNKKVRRNPEQPL 459
+LE++ED++KVRR PL
Sbjct: 156 V--VLELNEDHRKVRRTTPVPL 175
>AF443828-1|AAN76710.1| 491|Homo sapiens acheron protein.
Length = 491
Score = 64.1 bits (149), Expect = 5e-10
Identities = 32/82 (39%), Positives = 53/82 (64%), Gaps = 1/82 (1%)
Frame = +1
Query: 217 IIRQVEYYFGDVNLHRDKFLQEQIKLDD-GWVPLEILTKFNRLAKLTEDTDVIANALNKS 393
++ Q+E+YF D NL +D FL + ++ + G+V +++LT F ++ LT D A+AL S
Sbjct: 96 LVDQIEFYFSDENLEKDAFLLKHVRRNKLGYVSVKLLTSFKKVKHLTRDWRTTAHALKYS 155
Query: 394 TSGLLEVSEDNKKVRRNPEQPL 459
+LE++ED++KVRR PL
Sbjct: 156 V--VLELNEDHRKVRRTTPVPL 175
>DQ185046-1|ABD14426.1| 48|Homo sapiens Sjogren syndrome antigen B
protein.
Length = 48
Score = 60.9 bits (141), Expect = 4e-09
Identities = 25/32 (78%), Positives = 28/32 (87%)
Frame = +1
Query: 217 IIRQVEYYFGDVNLHRDKFLQEQIKLDDGWVP 312
I Q+EYYFGD NL RDKFL+EQIKLD+GWVP
Sbjct: 17 ICHQIEYYFGDFNLPRDKFLKEQIKLDEGWVP 48
>AK002058-1|BAA92061.1| 491|Homo sapiens protein ( Homo sapiens
cDNA FLJ11196 fis, clone PLACE1007688, weakly similar to
LA PROTEIN HOMOLOG. ).
Length = 491
Score = 60.5 bits (140), Expect = 6e-09
Identities = 31/82 (37%), Positives = 52/82 (63%), Gaps = 1/82 (1%)
Frame = +1
Query: 217 IIRQVEYYFGDVNLHRDKFLQEQIKLDD-GWVPLEILTKFNRLAKLTEDTDVIANALNKS 393
++ Q+E+ F D NL +D FL + ++ + G+V +++LT F ++ LT D A+AL S
Sbjct: 96 LVDQIEFCFSDENLEKDAFLLKHVRRNKLGYVSVKLLTSFKKVKHLTRDWRTTAHALKYS 155
Query: 394 TSGLLEVSEDNKKVRRNPEQPL 459
+LE++ED++KVRR PL
Sbjct: 156 V--VLELNEDHRKVRRTTPVPL 175
>BC001460-1|AAH01460.2| 1019|Homo sapiens La ribonucleoprotein
domain family, member 1 protein.
Length = 1019
Score = 57.6 bits (133), Expect = 4e-08
Identities = 32/83 (38%), Positives = 51/83 (61%), Gaps = 1/83 (1%)
Frame = +1
Query: 217 IIRQVEYYFGDVNLHRDKFLQEQIKLDDGWVPLEILTKFNRLAKLTEDTDVIANALNKST 396
I RQ+EYYF NL RD FL+ ++ DG++P+ ++ F+R+ LT D +I AL S
Sbjct: 330 IKRQIEYYFSVDNLERDFFLRRKMDA-DGFLPITLIASFHRVQALTTDISLIFAALKDSK 388
Query: 397 SGLLEVSEDNKKVRRNPEQ-PLP 462
++E+ ++ + R PE+ PLP
Sbjct: 389 --VVEIVDEKVRRREEPEKWPLP 409
>AK091465-1|BAC03668.1| 816|Homo sapiens protein ( Homo sapiens
cDNA FLJ34146 fis, clone FCBBF3011889, weakly similar to
Drosophila melanogaster La related protein (larp) mRNA.
).
Length = 816
Score = 57.6 bits (133), Expect = 4e-08
Identities = 32/83 (38%), Positives = 51/83 (61%), Gaps = 1/83 (1%)
Frame = +1
Query: 217 IIRQVEYYFGDVNLHRDKFLQEQIKLDDGWVPLEILTKFNRLAKLTEDTDVIANALNKST 396
I RQ+EYYF NL RD FL+ ++ DG++P+ ++ F+R+ LT D +I AL S
Sbjct: 407 IKRQIEYYFSVDNLERDFFLRRKMDA-DGFLPITLIASFHRVQALTTDISLIFAALKDSK 465
Query: 397 SGLLEVSEDNKKVRRNPEQ-PLP 462
++E+ ++ + R PE+ PLP
Sbjct: 466 --VVEIVDEKVRRREEPEKWPLP 486
>AB018274-1|BAA34451.1| 1096|Homo sapiens KIAA0731 protein protein.
Length = 1096
Score = 57.6 bits (133), Expect = 4e-08
Identities = 32/83 (38%), Positives = 51/83 (61%), Gaps = 1/83 (1%)
Frame = +1
Query: 217 IIRQVEYYFGDVNLHRDKFLQEQIKLDDGWVPLEILTKFNRLAKLTEDTDVIANALNKST 396
I RQ+EYYF NL RD FL+ ++ DG++P+ ++ F+R+ LT D +I AL S
Sbjct: 407 IKRQIEYYFSVDNLERDFFLRRKMDA-DGFLPITLIASFHRVQALTTDISLIFAALKDSK 465
Query: 397 SGLLEVSEDNKKVRRNPEQ-PLP 462
++E+ ++ + R PE+ PLP
Sbjct: 466 --VVEIVDEKVRRREEPEKWPLP 486
>BC110300-1|AAI10301.1| 335|Homo sapiens LARP2 protein protein.
Length = 335
Score = 54.4 bits (125), Expect = 4e-07
Identities = 29/83 (34%), Positives = 51/83 (61%), Gaps = 1/83 (1%)
Frame = +1
Query: 217 IIRQVEYYFGDVNLHRDKFLQEQIKLDDGWVPLEILTKFNRLAKLTEDTDVIANALNKST 396
I RQ+EYYF NL RD FL+ ++ + G++P+ ++ F R+ LT + ++I AL ST
Sbjct: 219 IKRQIEYYFSVENLERDFFLRGKMD-EQGFLPISLIAGFQRVQALTTNLNLILEALKDST 277
Query: 397 SGLLEVSEDNKKVRRNPEQ-PLP 462
+E+ ++ + + PE+ P+P
Sbjct: 278 E--VEIVDEKMRKKIEPEKWPIP 298
>AK001240-1|BAA91576.1| 328|Homo sapiens protein ( Homo sapiens
cDNA FLJ10378 fis, clone NT2RM2002004, weakly similar to
LA PROTEIN HOMOLOG. ).
Length = 328
Score = 53.6 bits (123), Expect = 7e-07
Identities = 29/83 (34%), Positives = 50/83 (60%), Gaps = 1/83 (1%)
Frame = +1
Query: 217 IIRQVEYYFGDVNLHRDKFLQEQIKLDDGWVPLEILTKFNRLAKLTEDTDVIANALNKST 396
I RQ+EYYF NL RD FL+ ++ + G++P+ ++ F R+ LT + ++I AL ST
Sbjct: 25 IKRQIEYYFSVENLERDFFLRGKMD-EQGFLPISLIAGFQRVQALTTNLNLILEALKDST 83
Query: 397 SGLLEVSEDNKKVRRNPEQ-PLP 462
+E+ ++ + PE+ P+P
Sbjct: 84 E--VEIVDEKMRKEIEPEKWPIP 104
>AK092764-1|BAC03970.1| 575|Homo sapiens protein ( Homo sapiens
cDNA FLJ35445 fis, clone SMINT2003551, weakly similar to
Drosophila melanogaster La related protein (larp) mRNA.
).
Length = 575
Score = 52.8 bits (121), Expect = 1e-06
Identities = 28/83 (33%), Positives = 50/83 (60%), Gaps = 1/83 (1%)
Frame = +1
Query: 217 IIRQVEYYFGDVNLHRDKFLQEQIKLDDGWVPLEILTKFNRLAKLTEDTDVIANALNKST 396
I RQ+EYYF NL RD FL+ ++ + G++P+ ++ F R+ LT + ++I L ST
Sbjct: 172 IKRQIEYYFSVENLERDFFLRGKMD-EQGFLPISLIAGFQRVQALTTNLNLILEVLKDST 230
Query: 397 SGLLEVSEDNKKVRRNPEQ-PLP 462
+E+ ++ + + PE+ P+P
Sbjct: 231 E--VEIVDEKMRKKIEPEKWPIP 251
>BC063479-1|AAH63479.1| 374|Homo sapiens LARP4 protein protein.
Length = 374
Score = 41.9 bits (94), Expect = 0.002
Identities = 23/72 (31%), Positives = 40/72 (55%)
Frame = +1
Query: 223 RQVEYYFGDVNLHRDKFLQEQIKLDDGWVPLEILTKFNRLAKLTEDTDVIANALNKSTSG 402
+Q+E+ F NL +D +L Q+ D ++P+ + + KLT D D+I L +S
Sbjct: 125 KQLEFCFSRENLSKDLYLISQMDSDQ-FIPIWTVANMEEIKKLTTDPDLILEVLR--SSP 181
Query: 403 LLEVSEDNKKVR 438
+++V E +KVR
Sbjct: 182 MVQVDEKGEKVR 193
>BC022377-1|AAH22377.1| 188|Homo sapiens LARP4 protein protein.
Length = 188
Score = 41.9 bits (94), Expect = 0.002
Identities = 23/72 (31%), Positives = 40/72 (55%)
Frame = +1
Query: 223 RQVEYYFGDVNLHRDKFLQEQIKLDDGWVPLEILTKFNRLAKLTEDTDVIANALNKSTSG 402
+Q+E+ F NL +D +L Q+ D ++P+ + + KLT D D+I L +S
Sbjct: 55 KQLEFCFSRENLSKDLYLISQMDSDQ-FIPIWTVANMEEIKKLTTDPDLILEVLR--SSP 111
Query: 403 LLEVSEDNKKVR 438
+++V E +KVR
Sbjct: 112 MVQVDEKGEKVR 123
>AY004310-1|AAF86614.1| 375|Homo sapiens c-Mpl binding protein
protein.
Length = 375
Score = 41.9 bits (94), Expect = 0.002
Identities = 23/72 (31%), Positives = 40/72 (55%)
Frame = +1
Query: 223 RQVEYYFGDVNLHRDKFLQEQIKLDDGWVPLEILTKFNRLAKLTEDTDVIANALNKSTSG 402
+Q+E+ F NL +D +L Q+ D ++P+ + + KLT D D+I L +S
Sbjct: 55 KQLEFCFSRENLSKDLYLISQMDSDQ-FIPIWTVANMEEIKKLTTDPDLILEVLR--SSP 111
Query: 403 LLEVSEDNKKVR 438
+++V E +KVR
Sbjct: 112 MVQVDEKGEKVR 123
>AK125113-1|BAC86052.1| 654|Homo sapiens protein ( Homo sapiens
cDNA FLJ43123 fis, clone CTONG3003972. ).
Length = 654
Score = 41.9 bits (94), Expect = 0.002
Identities = 23/72 (31%), Positives = 40/72 (55%)
Frame = +1
Query: 223 RQVEYYFGDVNLHRDKFLQEQIKLDDGWVPLEILTKFNRLAKLTEDTDVIANALNKSTSG 402
+Q+E+ F NL +D +L Q+ D ++P+ + + KLT D D+I L +S
Sbjct: 55 KQLEFCFSRENLSKDLYLISQMDSDQ-FIPIWTVANMEEIKKLTTDPDLILEVLR--SSP 111
Query: 403 LLEVSEDNKKVR 438
+++V E +KVR
Sbjct: 112 MVQVDEKGEKVR 123
>M35261-1|AAA36652.1| 27|Homo sapiens protein ( Human SS-B/La
protein mRNA, partial cds. ).
Length = 27
Score = 37.5 bits (83), Expect = 0.046
Identities = 13/27 (48%), Positives = 21/27 (77%)
Frame = +1
Query: 409 EVSEDNKKVRRNPEQPLPEMNEELRKE 489
E+SED K+RR+P +PLPE+ +E + +
Sbjct: 1 EISEDKTKIRRSPSKPLPEVTDEYKND 27
>D86971-1|BAA13207.2| 751|Homo sapiens KIAA0217 protein.
Length = 751
Score = 37.5 bits (83), Expect = 0.046
Identities = 23/84 (27%), Positives = 42/84 (50%)
Frame = +1
Query: 223 RQVEYYFGDVNLHRDKFLQEQIKLDDGWVPLEILTKFNRLAKLTEDTDVIANALNKSTSG 402
+ +E+ NL D +L Q+ D +VP+ + + + KL+ D D+I L +
Sbjct: 175 KTLEFCLSRENLASDMYLISQMDSDQ-YVPITTVANLDHIKKLSTDVDLIVEVLR--SLP 231
Query: 403 LLEVSEDNKKVRRNPEQPLPEMNE 474
L++V E +KVR N + + + E
Sbjct: 232 LVQVDEKGEKVRPNQNRCIVILRE 255
>BC131630-1|AAI31631.1| 738|Homo sapiens La ribonucleoprotein
domain family, member 5 protein.
Length = 738
Score = 37.5 bits (83), Expect = 0.046
Identities = 23/84 (27%), Positives = 42/84 (50%)
Frame = +1
Query: 223 RQVEYYFGDVNLHRDKFLQEQIKLDDGWVPLEILTKFNRLAKLTEDTDVIANALNKSTSG 402
+ +E+ NL D +L Q+ D +VP+ + + + KL+ D D+I L +
Sbjct: 162 KTLEFCLSRENLASDMYLISQMDSDQ-YVPITTVANLDHIKKLSTDVDLIVEVLR--SLP 218
Query: 403 LLEVSEDNKKVRRNPEQPLPEMNE 474
L++V E +KVR N + + + E
Sbjct: 219 LVQVDEKGEKVRPNQNRCIVILRE 242
>AL359878-4|CAI13663.2| 738|Homo sapiens La ribonucleoprotein
domain family, member 5 protein.
Length = 738
Score = 37.5 bits (83), Expect = 0.046
Identities = 23/84 (27%), Positives = 42/84 (50%)
Frame = +1
Query: 223 RQVEYYFGDVNLHRDKFLQEQIKLDDGWVPLEILTKFNRLAKLTEDTDVIANALNKSTSG 402
+ +E+ NL D +L Q+ D +VP+ + + + KL+ D D+I L +
Sbjct: 162 KTLEFCLSRENLASDMYLISQMDSDQ-YVPITTVANLDHIKKLSTDVDLIVEVLR--SLP 218
Query: 403 LLEVSEDNKKVRRNPEQPLPEMNE 474
L++V E +KVR N + + + E
Sbjct: 219 LVQVDEKGEKVRPNQNRCIVILRE 242
>AL157709-4|CAI39596.2| 738|Homo sapiens La ribonucleoprotein
domain family, member 5 protein.
Length = 738
Score = 37.5 bits (83), Expect = 0.046
Identities = 23/84 (27%), Positives = 42/84 (50%)
Frame = +1
Query: 223 RQVEYYFGDVNLHRDKFLQEQIKLDDGWVPLEILTKFNRLAKLTEDTDVIANALNKSTSG 402
+ +E+ NL D +L Q+ D +VP+ + + + KL+ D D+I L +
Sbjct: 162 KTLEFCLSRENLASDMYLISQMDSDQ-YVPITTVANLDHIKKLSTDVDLIVEVLR--SLP 218
Query: 403 LLEVSEDNKKVRRNPEQPLPEMNE 474
L++V E +KVR N + + + E
Sbjct: 219 LVQVDEKGEKVRPNQNRCIVILRE 242
>X14684-1|CAA32815.1| 296|Homo sapiens La 4.1 protein protein.
Length = 296
Score = 36.7 bits (81), Expect = 0.080
Identities = 16/42 (38%), Positives = 27/42 (64%)
Frame = +1
Query: 505 IYAKGFAKDASLDDLLNYFKQFQEVENVIMRRYVEKSTKETL 630
+Y KGF DA+LDD+ + + +V N+ MRR + K+ K ++
Sbjct: 1 LYIKGFPTDATLDDIKEWLEDKGQVLNIQMRRTLHKAFKGSI 42
>AL365436-3|CAI16590.1| 1203|Homo sapiens cingulin protein.
Length = 1203
Score = 32.3 bits (70), Expect = 1.7
Identities = 23/104 (22%), Positives = 47/104 (45%), Gaps = 6/104 (5%)
Frame = +1
Query: 343 AKLTEDTDVIANALNKSTSGLLEVSEDNKKVRRNPEQPLPEMNEELRKEICNRSIYAKGF 522
A+L E ++ +++ L ++ ED+K+ + + L + E+ R+E+ + AK +
Sbjct: 838 AELEEQKRLLDRTVDRLNKELEKIGEDSKQALQQLQAQLEDYKEKARREVADAQRQAKDW 897
Query: 523 AKDA--SLDDLLNYFKQFQEVENVIMRRYVEKST----KETLVQ 636
A +A + L + Q + + E+ T KE L Q
Sbjct: 898 ASEAEKTSGGLSRLQDEIQRLRQALQASQAERDTARLDKELLAQ 941
>AF263462-1|AAF74498.1| 1203|Homo sapiens cingulin protein.
Length = 1203
Score = 32.3 bits (70), Expect = 1.7
Identities = 23/104 (22%), Positives = 47/104 (45%), Gaps = 6/104 (5%)
Frame = +1
Query: 343 AKLTEDTDVIANALNKSTSGLLEVSEDNKKVRRNPEQPLPEMNEELRKEICNRSIYAKGF 522
A+L E ++ +++ L ++ ED+K+ + + L + E+ R+E+ + AK +
Sbjct: 838 AELEEQKRLLDRTVDRLNKELEKIGEDSKQALQQLQAQLEDYKEKARREVADAQRQAKDW 897
Query: 523 AKDA--SLDDLLNYFKQFQEVENVIMRRYVEKST----KETLVQ 636
A +A + L + Q + + E+ T KE L Q
Sbjct: 898 ASEAEKTSGGLSRLQDEIQRLRQALQASQAERDTARLDKELLAQ 941
>AB037740-1|BAA92557.1| 1208|Homo sapiens KIAA1319 protein protein.
Length = 1208
Score = 32.3 bits (70), Expect = 1.7
Identities = 23/104 (22%), Positives = 47/104 (45%), Gaps = 6/104 (5%)
Frame = +1
Query: 343 AKLTEDTDVIANALNKSTSGLLEVSEDNKKVRRNPEQPLPEMNEELRKEICNRSIYAKGF 522
A+L E ++ +++ L ++ ED+K+ + + L + E+ R+E+ + AK +
Sbjct: 843 AELEEQKRLLDRTVDRLNKELEKIGEDSKQALQQLQAQLEDYKEKARREVADAQRQAKDW 902
Query: 523 AKDA--SLDDLLNYFKQFQEVENVIMRRYVEKST----KETLVQ 636
A +A + L + Q + + E+ T KE L Q
Sbjct: 903 ASEAEKTSGGLSRLQDEIQRLRQALQASQAERDTARLDKELLAQ 946
>BC012010-1|AAH12010.1| 475|Homo sapiens serum amyloid A-like 1
protein.
Length = 475
Score = 31.9 bits (69), Expect = 2.3
Identities = 15/34 (44%), Positives = 23/34 (67%), Gaps = 1/34 (2%)
Frame = +1
Query: 397 SGLLE-VSEDNKKVRRNPEQPLPEMNEELRKEIC 495
SGL++ VS +N K + E+ L E++EE+ EIC
Sbjct: 42 SGLIQIVSPENTKSSSDDEEQLTELDEEMENEIC 75
>D89678-1|BAA22860.1| 271|Homo sapiens A+U-rich element RNA binding
factor protein.
Length = 271
Score = 31.5 bits (68), Expect = 3.0
Identities = 28/122 (22%), Positives = 48/122 (39%), Gaps = 6/122 (4%)
Frame = +1
Query: 316 EILTKFNRLAKLTEDTDVIANALNKSTSGLLEVSEDNKKVRRNPEQPL------PEMNEE 477
E L++F + T TD + L + + KV E L P+ +
Sbjct: 17 EYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVDKVLELKEHKLDGKLIDPKRAKA 76
Query: 478 LRKEICNRSIYAKGFAKDASLDDLLNYFKQFQEVENVIMRRYVEKSTKETLVQGFCICYI 657
L+ + + ++ G + D S + + YF F E+EN+ + TK +GFC
Sbjct: 77 LKGKEPPKKVFVGGLSPDTSEEQIKEYFGAFGEIENI----ELPMDTKTNERRGFCFITY 132
Query: 658 QD 663
D
Sbjct: 133 TD 134
>D89092-1|BAA24361.1| 301|Homo sapiens hnRNP JKTBP protein.
Length = 301
Score = 31.5 bits (68), Expect = 3.0
Identities = 28/122 (22%), Positives = 48/122 (39%), Gaps = 6/122 (4%)
Frame = +1
Query: 316 EILTKFNRLAKLTEDTDVIANALNKSTSGLLEVSEDNKKVRRNPEQPL------PEMNEE 477
E L++F + T TD + L + + KV E L P+ +
Sbjct: 47 EYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVDKVLELKEHKLDGKLIDPKRAKA 106
Query: 478 LRKEICNRSIYAKGFAKDASLDDLLNYFKQFQEVENVIMRRYVEKSTKETLVQGFCICYI 657
L+ + + ++ G + D S + + YF F E+EN+ + TK +GFC
Sbjct: 107 LKGKEPPKKVFVGGLSPDTSEEQIKEYFGAFGEIENI----ELPMDTKTNERRGFCFITY 162
Query: 658 QD 663
D
Sbjct: 163 TD 164
>CR407623-1|CAG28551.1| 420|Homo sapiens HNRPDL protein.
Length = 420
Score = 31.5 bits (68), Expect = 3.0
Identities = 28/122 (22%), Positives = 48/122 (39%), Gaps = 6/122 (4%)
Frame = +1
Query: 316 EILTKFNRLAKLTEDTDVIANALNKSTSGLLEVSEDNKKVRRNPEQPL------PEMNEE 477
E L++F + T TD + L + + KV E L P+ +
Sbjct: 166 EYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVDKVLELKEHKLDGKLIDPKRAKA 225
Query: 478 LRKEICNRSIYAKGFAKDASLDDLLNYFKQFQEVENVIMRRYVEKSTKETLVQGFCICYI 657
L+ + + ++ G + D S + + YF F E+EN+ + TK +GFC
Sbjct: 226 LKGKEPPKKVFVGGLSPDTSEEQIKEYFGAFGEIENI----ELPMDTKTNERRGFCFITY 281
Query: 658 QD 663
D
Sbjct: 282 TD 283
>BC071944-1|AAH71944.1| 420|Homo sapiens heterogeneous nuclear
ribonucleoprotein D-like protein.
Length = 420
Score = 31.5 bits (68), Expect = 3.0
Identities = 28/122 (22%), Positives = 48/122 (39%), Gaps = 6/122 (4%)
Frame = +1
Query: 316 EILTKFNRLAKLTEDTDVIANALNKSTSGLLEVSEDNKKVRRNPEQPL------PEMNEE 477
E L++F + T TD + L + + KV E L P+ +
Sbjct: 166 EYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVDKVLELKEHKLDGKLIDPKRAKA 225
Query: 478 LRKEICNRSIYAKGFAKDASLDDLLNYFKQFQEVENVIMRRYVEKSTKETLVQGFCICYI 657
L+ + + ++ G + D S + + YF F E+EN+ + TK +GFC
Sbjct: 226 LKGKEPPKKVFVGGLSPDTSEEQIKEYFGAFGEIENI----ELPMDTKTNERRGFCFITY 281
Query: 658 QD 663
D
Sbjct: 282 TD 283
>BC011714-1|AAH11714.1| 420|Homo sapiens heterogeneous nuclear
ribonucleoprotein D-like protein.
Length = 420
Score = 31.5 bits (68), Expect = 3.0
Identities = 28/122 (22%), Positives = 48/122 (39%), Gaps = 6/122 (4%)
Frame = +1
Query: 316 EILTKFNRLAKLTEDTDVIANALNKSTSGLLEVSEDNKKVRRNPEQPL------PEMNEE 477
E L++F + T TD + L + + KV E L P+ +
Sbjct: 166 EYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVDKVLELKEHKLDGKLIDPKRAKA 225
Query: 478 LRKEICNRSIYAKGFAKDASLDDLLNYFKQFQEVENVIMRRYVEKSTKETLVQGFCICYI 657
L+ + + ++ G + D S + + YF F E+EN+ + TK +GFC
Sbjct: 226 LKGKEPPKKVFVGGLSPDTSEEQIKEYFGAFGEIENI----ELPMDTKTNERRGFCFITY 281
Query: 658 QD 663
D
Sbjct: 282 TD 283
>BC007392-1|AAH07392.2| 415|Homo sapiens HNRPDL protein protein.
Length = 415
Score = 31.5 bits (68), Expect = 3.0
Identities = 28/122 (22%), Positives = 48/122 (39%), Gaps = 6/122 (4%)
Frame = +1
Query: 316 EILTKFNRLAKLTEDTDVIANALNKSTSGLLEVSEDNKKVRRNPEQPL------PEMNEE 477
E L++F + T TD + L + + KV E L P+ +
Sbjct: 161 EYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVDKVLELKEHKLDGKLIDPKRAKA 220
Query: 478 LRKEICNRSIYAKGFAKDASLDDLLNYFKQFQEVENVIMRRYVEKSTKETLVQGFCICYI 657
L+ + + ++ G + D S + + YF F E+EN+ + TK +GFC
Sbjct: 221 LKGKEPPKKVFVGGLSPDTSEEQIKEYFGAFGEIENI----ELPMDTKTNERRGFCFITY 276
Query: 658 QD 663
D
Sbjct: 277 TD 278
>AY528715-1|AAT44400.1| 1016|Homo sapiens antigen MU-RMS-40.16A
protein.
Length = 1016
Score = 31.5 bits (68), Expect = 3.0
Identities = 30/113 (26%), Positives = 56/113 (49%), Gaps = 10/113 (8%)
Frame = +1
Query: 316 EILTKFNRLAKLTEDTDVIA--NALNKSTSGLLE-VSEDNKKVRRNPEQPLPEMN---EE 477
E +TK + K+T D VI N L + +E + D + V+RN E+ + ++N E+
Sbjct: 656 EQVTKLQQQLKITTDNKVIEEKNELIRDLETQIECLMSDQECVKRNREEEIEQLNEVIEK 715
Query: 478 LRKEICN----RSIYAKGFAKDASLDDLLNYFKQFQEVENVIMRRYVEKSTKE 624
L++E+ N S+ A +++A D L + E + + + VE + +E
Sbjct: 716 LQQELANIGQKTSMNAHSLSEEA---DSLKHQLDVVIAEKLALEQQVETANEE 765
>AY453824-1|AAR17782.1| 298|Homo sapiens CArG binding factor
protein.
Length = 298
Score = 31.5 bits (68), Expect = 3.0
Identities = 28/122 (22%), Positives = 48/122 (39%), Gaps = 6/122 (4%)
Frame = +1
Query: 316 EILTKFNRLAKLTEDTDVIANALNKSTSGLLEVSEDNKKVRRNPEQPL------PEMNEE 477
E L++F + T TD + L + + KV E L P+ +
Sbjct: 44 EYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVDKVLELKEHKLDGKLIDPKRAKA 103
Query: 478 LRKEICNRSIYAKGFAKDASLDDLLNYFKQFQEVENVIMRRYVEKSTKETLVQGFCICYI 657
L+ + + ++ G + D S + + YF F E+EN+ + TK +GFC
Sbjct: 104 LKGKEPPKKVFVGGLSPDTSEEQIKEYFGAFGEIENI----ELPMDTKTNERRGFCFITY 159
Query: 658 QD 663
D
Sbjct: 160 TD 161
>AJ131693-1|CAB40713.1| 3908|Homo sapiens AKAP450 protein protein.
Length = 3908
Score = 31.5 bits (68), Expect = 3.0
Identities = 30/113 (26%), Positives = 56/113 (49%), Gaps = 10/113 (8%)
Frame = +1
Query: 316 EILTKFNRLAKLTEDTDVIA--NALNKSTSGLLE-VSEDNKKVRRNPEQPLPEMN---EE 477
E +TK + K+T D VI N L + +E + D + V+RN E+ + ++N E+
Sbjct: 2300 EQVTKLQQQLKITTDNKVIEEKNELIRDLETQIECLMSDQECVKRNREEEIEQLNEVIEK 2359
Query: 478 LRKEICN----RSIYAKGFAKDASLDDLLNYFKQFQEVENVIMRRYVEKSTKE 624
L++E+ N S+ A +++A D L + E + + + VE + +E
Sbjct: 2360 LQQELANIGQKTSMNAHSLSEEA---DSLKHQLDVVIAEKLALEQQVETANEE 2409
>AJ010770-1|CAA09361.1| 3911|Homo sapiens Hyperion protein protein.
Length = 3911
Score = 31.5 bits (68), Expect = 3.0
Identities = 30/113 (26%), Positives = 56/113 (49%), Gaps = 10/113 (8%)
Frame = +1
Query: 316 EILTKFNRLAKLTEDTDVIA--NALNKSTSGLLE-VSEDNKKVRRNPEQPLPEMN---EE 477
E +TK + K+T D VI N L + +E + D + V+RN E+ + ++N E+
Sbjct: 2311 EQVTKLQQQLKITTDNKVIEEKNELIRDLETQIECLMSDQECVKRNREEEIEQLNEVIEK 2370
Query: 478 LRKEICN----RSIYAKGFAKDASLDDLLNYFKQFQEVENVIMRRYVEKSTKE 624
L++E+ N S+ A +++A D L + E + + + VE + +E
Sbjct: 2371 LQQELANIGQKTSMNAHSLSEEA---DSLKHQLDVVIAEKLALEQQVETANEE 2420
>AF091711-1|AAD39719.1| 1773|Homo sapiens splice variant AKAP350
protein.
Length = 1773
Score = 31.5 bits (68), Expect = 3.0
Identities = 30/113 (26%), Positives = 56/113 (49%), Gaps = 10/113 (8%)
Frame = +1
Query: 316 EILTKFNRLAKLTEDTDVIA--NALNKSTSGLLE-VSEDNKKVRRNPEQPLPEMN---EE 477
E +TK + K+T D VI N L + +E + D + V+RN E+ + ++N E+
Sbjct: 147 EQVTKLQQQLKITTDNKVIEEKNELIRDLETQIECLMSDQECVKRNREEEIEQLNEVIEK 206
Query: 478 LRKEICN----RSIYAKGFAKDASLDDLLNYFKQFQEVENVIMRRYVEKSTKE 624
L++E+ N S+ A +++A D L + E + + + VE + +E
Sbjct: 207 LQQELANIGQKTSMNAHSLSEEA---DSLKHQLDVVIAEKLALEQQVETANEE 256
>AF083037-1|AAD22767.1| 3595|Homo sapiens A-kinase anchoring protein
AKAP350 protein.
Length = 3595
Score = 31.5 bits (68), Expect = 3.0
Identities = 30/113 (26%), Positives = 56/113 (49%), Gaps = 10/113 (8%)
Frame = +1
Query: 316 EILTKFNRLAKLTEDTDVIA--NALNKSTSGLLE-VSEDNKKVRRNPEQPLPEMN---EE 477
E +TK + K+T D VI N L + +E + D + V+RN E+ + ++N E+
Sbjct: 1987 EQVTKLQQQLKITTDNKVIEEKNELIRDLETQIECLMSDQECVKRNREEEIEQLNEVIEK 2046
Query: 478 LRKEICN----RSIYAKGFAKDASLDDLLNYFKQFQEVENVIMRRYVEKSTKE 624
L++E+ N S+ A +++A D L + E + + + VE + +E
Sbjct: 2047 LQQELANIGQKTSMNAHSLSEEA---DSLKHQLDVVIAEKLALEQQVETANEE 2096
>AC124016-2|AAY40914.1| 420|Homo sapiens unknown protein.
Length = 420
Score = 31.5 bits (68), Expect = 3.0
Identities = 28/122 (22%), Positives = 48/122 (39%), Gaps = 6/122 (4%)
Frame = +1
Query: 316 EILTKFNRLAKLTEDTDVIANALNKSTSGLLEVSEDNKKVRRNPEQPL------PEMNEE 477
E L++F + T TD + L + + KV E L P+ +
Sbjct: 166 EYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVDKVLELKEHKLDGKLIDPKRAKA 225
Query: 478 LRKEICNRSIYAKGFAKDASLDDLLNYFKQFQEVENVIMRRYVEKSTKETLVQGFCICYI 657
L+ + + ++ G + D S + + YF F E+EN+ + TK +GFC
Sbjct: 226 LKGKEPPKKVFVGGLSPDTSEEQIKEYFGAFGEIENI----ELPMDTKTNERRGFCFITY 281
Query: 658 QD 663
D
Sbjct: 282 TD 283
>AC004013-1|AAB96867.2| 2058|Homo sapiens unknown protein.
Length = 2058
Score = 31.5 bits (68), Expect = 3.0
Identities = 30/113 (26%), Positives = 56/113 (49%), Gaps = 10/113 (8%)
Frame = +1
Query: 316 EILTKFNRLAKLTEDTDVIA--NALNKSTSGLLE-VSEDNKKVRRNPEQPLPEMN---EE 477
E +TK + K+T D VI N L + +E + D + V+RN E+ + ++N E+
Sbjct: 509 EQVTKLQQQLKITTDNKVIEEKNELIRDLETQIECLMSDQECVKRNREEEIEQLNEVIEK 568
Query: 478 LRKEICN----RSIYAKGFAKDASLDDLLNYFKQFQEVENVIMRRYVEKSTKE 624
L++E+ N S+ A +++A D L + E + + + VE + +E
Sbjct: 569 LQQELANIGQKTSMNAHSLSEEA---DSLKHQLDVVIAEKLALEQQVETANEE 618
>AB066484-1|BAB62188.1| 244|Homo sapiens JKTBP1delta6 protein.
Length = 244
Score = 31.5 bits (68), Expect = 3.0
Identities = 28/122 (22%), Positives = 48/122 (39%), Gaps = 6/122 (4%)
Frame = +1
Query: 316 EILTKFNRLAKLTEDTDVIANALNKSTSGLLEVSEDNKKVRRNPEQPL------PEMNEE 477
E L++F + T TD + L + + KV E L P+ +
Sbjct: 47 EYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVDKVLELKEHKLDGKLIDPKRAKA 106
Query: 478 LRKEICNRSIYAKGFAKDASLDDLLNYFKQFQEVENVIMRRYVEKSTKETLVQGFCICYI 657
L+ + + ++ G + D S + + YF F E+EN+ + TK +GFC
Sbjct: 107 LKGKEPPKKVFVGGLSPDTSEEQIKEYFGAFGEIENI----ELPMDTKTNERRGFCFITY 162
Query: 658 QD 663
D
Sbjct: 163 TD 164
>AB019691-1|BAA78718.1| 3899|Homo sapiens Centrosome- and
Golgi-localized PKN-associated protein (CG-NAP) protein.
Length = 3899
Score = 31.5 bits (68), Expect = 3.0
Identities = 30/113 (26%), Positives = 56/113 (49%), Gaps = 10/113 (8%)
Frame = +1
Query: 316 EILTKFNRLAKLTEDTDVIA--NALNKSTSGLLE-VSEDNKKVRRNPEQPLPEMN---EE 477
E +TK + K+T D VI N L + +E + D + V+RN E+ + ++N E+
Sbjct: 2291 EQVTKLQQQLKITTDNKVIEEKNELIRDLETQIECLMSDQECVKRNREEEIEQLNEVIEK 2350
Query: 478 LRKEICN----RSIYAKGFAKDASLDDLLNYFKQFQEVENVIMRRYVEKSTKE 624
L++E+ N S+ A +++A D L + E + + + VE + +E
Sbjct: 2351 LQQELANIGQKTSMNAHSLSEEA---DSLKHQLDVVIAEKLALEQQVETANEE 2400
>AB018346-1|BAA34523.1| 1708|Homo sapiens KIAA0803 protein protein.
Length = 1708
Score = 31.5 bits (68), Expect = 3.0
Identities = 30/113 (26%), Positives = 56/113 (49%), Gaps = 10/113 (8%)
Frame = +1
Query: 316 EILTKFNRLAKLTEDTDVIA--NALNKSTSGLLE-VSEDNKKVRRNPEQPLPEMN---EE 477
E +TK + K+T D VI N L + +E + D + V+RN E+ + ++N E+
Sbjct: 100 EQVTKLQQQLKITTDNKVIEEKNELIRDLETQIECLMSDQECVKRNREEEIEQLNEVIEK 159
Query: 478 LRKEICN----RSIYAKGFAKDASLDDLLNYFKQFQEVENVIMRRYVEKSTKE 624
L++E+ N S+ A +++A D L + E + + + VE + +E
Sbjct: 160 LQQELANIGQKTSMNAHSLSEEA---DSLKHQLDVVIAEKLALEQQVETANEE 209
>AB017019-1|BAA75241.1| 420|Homo sapiens JKTBP2 protein.
Length = 420
Score = 31.5 bits (68), Expect = 3.0
Identities = 28/122 (22%), Positives = 48/122 (39%), Gaps = 6/122 (4%)
Frame = +1
Query: 316 EILTKFNRLAKLTEDTDVIANALNKSTSGLLEVSEDNKKVRRNPEQPL------PEMNEE 477
E L++F + T TD + L + + KV E L P+ +
Sbjct: 166 EYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVDKVLELKEHKLDGKLIDPKRAKA 225
Query: 478 LRKEICNRSIYAKGFAKDASLDDLLNYFKQFQEVENVIMRRYVEKSTKETLVQGFCICYI 657
L+ + + ++ G + D S + + YF F E+EN+ + TK +GFC
Sbjct: 226 LKGKEPPKKVFVGGLSPDTSEEQIKEYFGAFGEIENI----ELPMDTKTNERRGFCFITY 281
Query: 658 QD 663
D
Sbjct: 282 TD 283
>AB017018-2|BAA75240.1| 301|Homo sapiens JKTBP1 protein.
Length = 301
Score = 31.5 bits (68), Expect = 3.0
Identities = 28/122 (22%), Positives = 48/122 (39%), Gaps = 6/122 (4%)
Frame = +1
Query: 316 EILTKFNRLAKLTEDTDVIANALNKSTSGLLEVSEDNKKVRRNPEQPL------PEMNEE 477
E L++F + T TD + L + + KV E L P+ +
Sbjct: 47 EYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVDKVLELKEHKLDGKLIDPKRAKA 106
Query: 478 LRKEICNRSIYAKGFAKDASLDDLLNYFKQFQEVENVIMRRYVEKSTKETLVQGFCICYI 657
L+ + + ++ G + D S + + YF F E+EN+ + TK +GFC
Sbjct: 107 LKGKEPPKKVFVGGLSPDTSEEQIKEYFGAFGEIENI----ELPMDTKTNERRGFCFITY 162
Query: 658 QD 663
D
Sbjct: 163 TD 164
>AB017018-1|BAA75239.1| 420|Homo sapiens JKTBP2 protein.
Length = 420
Score = 31.5 bits (68), Expect = 3.0
Identities = 28/122 (22%), Positives = 48/122 (39%), Gaps = 6/122 (4%)
Frame = +1
Query: 316 EILTKFNRLAKLTEDTDVIANALNKSTSGLLEVSEDNKKVRRNPEQPL------PEMNEE 477
E L++F + T TD + L + + KV E L P+ +
Sbjct: 166 EYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVDKVLELKEHKLDGKLIDPKRAKA 225
Query: 478 LRKEICNRSIYAKGFAKDASLDDLLNYFKQFQEVENVIMRRYVEKSTKETLVQGFCICYI 657
L+ + + ++ G + D S + + YF F E+EN+ + TK +GFC
Sbjct: 226 LKGKEPPKKVFVGGLSPDTSEEQIKEYFGAFGEIENI----ELPMDTKTNERRGFCFITY 281
Query: 658 QD 663
D
Sbjct: 282 TD 283
>M99063-1|AAA35746.1| 638|Homo sapiens cytokeratin 2 protein.
Length = 638
Score = 30.3 bits (65), Expect = 7.0
Identities = 23/88 (26%), Positives = 39/88 (44%), Gaps = 2/88 (2%)
Frame = +1
Query: 382 LNKSTSGLLEVSEDNKKVRRNPEQPLPEMNE--ELRKEICNRSIYAKGFAKDASLDDLLN 555
LN+ L E+ KK N + + E + E+ + N + A + DDL
Sbjct: 404 LNRMIQRLRAEIENVKKQNANLQTAIAEAEQRGEMALKDANAKLQDLQTALQKAKDDLAR 463
Query: 556 YFKQFQEVENVIMRRYVEKSTKETLVQG 639
+ +QE+ NV + VE +T L++G
Sbjct: 464 LLRDYQELMNVKLALDVEIATYRKLLEG 491
>M24398-1|AAA61185.1| 102|Homo sapiens PTMS protein.
Length = 102
Score = 30.3 bits (65), Expect = 7.0
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = +2
Query: 122 EDKEVTVETNGQEENAKTENSEDETELDIGPGL 220
E++E T E +E+ + E+ E+E E D GP L
Sbjct: 47 EEEEETAEDGEEEDEGEEEDEEEEEEDDEGPAL 79
>BC128229-1|AAI28230.1| 101|Homo sapiens PTMS protein protein.
Length = 101
Score = 30.3 bits (65), Expect = 7.0
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = +2
Query: 122 EDKEVTVETNGQEENAKTENSEDETELDIGPGL 220
E++E T E +E+ + E+ E+E E D GP L
Sbjct: 46 EEEEETAEDGEEEDEGEEEDEEEEEEDDEGPAL 78
>BC017025-1|AAH17025.2| 102|Homo sapiens parathymosin protein.
Length = 102
Score = 30.3 bits (65), Expect = 7.0
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = +2
Query: 122 EDKEVTVETNGQEENAKTENSEDETELDIGPGL 220
E++E T E +E+ + E+ E+E E D GP L
Sbjct: 47 EEEEETAEDGEEEDEGEEEDEEEEEEDDEGPAL 79
>AJ564103-1|CAD91891.1| 638|Homo sapiens keratin 2p protein.
Length = 638
Score = 30.3 bits (65), Expect = 7.0
Identities = 23/88 (26%), Positives = 39/88 (44%), Gaps = 2/88 (2%)
Frame = +1
Query: 382 LNKSTSGLLEVSEDNKKVRRNPEQPLPEMNE--ELRKEICNRSIYAKGFAKDASLDDLLN 555
LN+ L E+ KK N + + E + E+ + N + A + DDL
Sbjct: 404 LNRMIQRLRAEIENVKKQNANLQTAIAEAEQRGEMALKDANAKLQDLQTALQKAKDDLAR 463
Query: 556 YFKQFQEVENVIMRRYVEKSTKETLVQG 639
+ +QE+ NV + VE +T L++G
Sbjct: 464 LLRDYQELMNVKLALDVEIATYRKLLEG 491
>Z26653-1|CAA81394.1| 3110|Homo sapiens laminin M chain (merosin)
protein.
Length = 3110
Score = 29.9 bits (64), Expect = 9.2
Identities = 15/38 (39%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Frame = +1
Query: 544 DLLNY-FKQFQEVENVIMRRYVEKSTKETLVQGFCICY 654
DL+ + K +E++ ++ RRY S K+ V G CICY
Sbjct: 254 DLMMFAHKDPREIDPIVTRRYYY-SVKDISVGGMCICY 290
>X77225-1|CAA54442.1| 376|Homo sapiens TFIIA/alpha, p55 protein.
Length = 376
Score = 29.9 bits (64), Expect = 9.2
Identities = 20/55 (36%), Positives = 28/55 (50%)
Frame = +2
Query: 122 EDKEVTVETNGQEENAKTENSEDETELDIGPGLFGKSNIILVM*IYIEINFCKNK 286
EDKE +GQ E NSED+ + G LF N+++ Y +I+ KNK
Sbjct: 297 EDKEKDGAEDGQVEEEPL-NSEDDVSDEEGQELFDTENVVVCQ--YDKIHRSKNK 348
>X75383-2|CAA53152.1| 337|Homo sapiens TFIIA protein.
Length = 337
Score = 29.9 bits (64), Expect = 9.2
Identities = 20/55 (36%), Positives = 28/55 (50%)
Frame = +2
Query: 122 EDKEVTVETNGQEENAKTENSEDETELDIGPGLFGKSNIILVM*IYIEINFCKNK 286
EDKE +GQ E NSED+ + G LF N+++ Y +I+ KNK
Sbjct: 258 EDKEKDGAEDGQVEEEPL-NSEDDVSDEEGQELFDTENVVVCQ--YDKIHRSKNK 309
>X75383-1|CAA53151.1| 376|Homo sapiens TFIIA protein.
Length = 376
Score = 29.9 bits (64), Expect = 9.2
Identities = 20/55 (36%), Positives = 28/55 (50%)
Frame = +2
Query: 122 EDKEVTVETNGQEENAKTENSEDETELDIGPGLFGKSNIILVM*IYIEINFCKNK 286
EDKE +GQ E NSED+ + G LF N+++ Y +I+ KNK
Sbjct: 297 EDKEKDGAEDGQVEEEPL-NSEDDVSDEEGQELFDTENVVVCQ--YDKIHRSKNK 348
>U66796-1|AAB18388.1| 3110|Homo sapiens laminin alpha 2 chain
protein.
Length = 3110
Score = 29.9 bits (64), Expect = 9.2
Identities = 15/38 (39%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Frame = +1
Query: 544 DLLNY-FKQFQEVENVIMRRYVEKSTKETLVQGFCICY 654
DL+ + K +E++ ++ RRY S K+ V G CICY
Sbjct: 254 DLMMFAHKDPREIDPIVTRRYYY-SVKDISVGGMCICY 290
>M69181-1|AAA99177.1| 1976|Homo sapiens non-muscle myosin B protein.
Length = 1976
Score = 29.9 bits (64), Expect = 9.2
Identities = 29/112 (25%), Positives = 52/112 (46%), Gaps = 4/112 (3%)
Frame = +1
Query: 316 EILTKFNRLAKLTEDTDVIANALNKSTSGLLEVSEDNK---KVRRNPEQPLPEMNEELRK 486
EIL ++ +K ++ ++ + + + +S L E E K K+R E + ++ E L+K
Sbjct: 986 EILLLEDQNSKFIKEKKLMEDRIAECSSQLAEEEEKAKNLAKIRNKQEVMISDLEERLKK 1045
Query: 487 EICNRSIYAKGFAK-DASLDDLLNYFKQFQEVENVIMRRYVEKSTKETLVQG 639
E R K K D DL + Q E++ I ++ + KE +QG
Sbjct: 1046 EEKTRQELEKAKRKLDGETTDLQD---QIAELQAQIDELKLQLAKKEEELQG 1094
>D14887-1|BAA03604.1| 376|Homo sapiens 'TFIIA-42' protein.
Length = 376
Score = 29.9 bits (64), Expect = 9.2
Identities = 20/55 (36%), Positives = 28/55 (50%)
Frame = +2
Query: 122 EDKEVTVETNGQEENAKTENSEDETELDIGPGLFGKSNIILVM*IYIEINFCKNK 286
EDKE +GQ E NSED+ + G LF N+++ Y +I+ KNK
Sbjct: 297 EDKEKDGAEDGQVEEEPL-NSEDDVSDEEGQELFDTENVVVCQ--YDKIHRSKNK 348
>D14886-1|BAA03603.1| 337|Homo sapiens TFIIA-37 protein.
Length = 337
Score = 29.9 bits (64), Expect = 9.2
Identities = 20/55 (36%), Positives = 28/55 (50%)
Frame = +2
Query: 122 EDKEVTVETNGQEENAKTENSEDETELDIGPGLFGKSNIILVM*IYIEINFCKNK 286
EDKE +GQ E NSED+ + G LF N+++ Y +I+ KNK
Sbjct: 258 EDKEKDGAEDGQVEEEPL-NSEDDVSDEEGQELFDTENVVVCQ--YDKIHRSKNK 309
>BC117691-1|AAI17692.1| 1976|Homo sapiens myosin, heavy chain 10,
non-muscle protein.
Length = 1976
Score = 29.9 bits (64), Expect = 9.2
Identities = 29/112 (25%), Positives = 52/112 (46%), Gaps = 4/112 (3%)
Frame = +1
Query: 316 EILTKFNRLAKLTEDTDVIANALNKSTSGLLEVSEDNK---KVRRNPEQPLPEMNEELRK 486
EIL ++ +K ++ ++ + + + +S L E E K K+R E + ++ E L+K
Sbjct: 986 EILLLEDQNSKFIKEKKLMEDRIAECSSQLAEEEEKAKNLAKIRNKQEVMISDLEERLKK 1045
Query: 487 EICNRSIYAKGFAK-DASLDDLLNYFKQFQEVENVIMRRYVEKSTKETLVQG 639
E R K K D DL + Q E++ I ++ + KE +QG
Sbjct: 1046 EEKTRQELEKAKRKLDGETTDLQD---QIAELQAQIDELKLQLAKKEEELQG 1094
>BC117690-1|AAI17691.1| 1976|Homo sapiens myosin, heavy chain 10,
non-muscle protein.
Length = 1976
Score = 29.9 bits (64), Expect = 9.2
Identities = 29/112 (25%), Positives = 52/112 (46%), Gaps = 4/112 (3%)
Frame = +1
Query: 316 EILTKFNRLAKLTEDTDVIANALNKSTSGLLEVSEDNK---KVRRNPEQPLPEMNEELRK 486
EIL ++ +K ++ ++ + + + +S L E E K K+R E + ++ E L+K
Sbjct: 986 EILLLEDQNSKFIKEKKLMEDRIAECSSQLAEEEEKAKNLAKIRNKQEVMISDLEERLKK 1045
Query: 487 EICNRSIYAKGFAK-DASLDDLLNYFKQFQEVENVIMRRYVEKSTKETLVQG 639
E R K K D DL + Q E++ I ++ + KE +QG
Sbjct: 1046 EEKTRQELEKAKRKLDGETTDLQD---QIAELQAQIDELKLQLAKKEEELQG 1094
>BC107156-1|AAI07157.1| 376|Homo sapiens general transcription
factor IIA, 1, 19/37kDa protein.
Length = 376
Score = 29.9 bits (64), Expect = 9.2
Identities = 20/55 (36%), Positives = 28/55 (50%)
Frame = +2
Query: 122 EDKEVTVETNGQEENAKTENSEDETELDIGPGLFGKSNIILVM*IYIEINFCKNK 286
EDKE +GQ E NSED+ + G LF N+++ Y +I+ KNK
Sbjct: 297 EDKEKDGAEDGQVEEEPL-NSEDDVSDEEGQELFDTENVVVCQ--YDKIHRSKNK 348
>BC107155-1|AAI07156.1| 376|Homo sapiens general transcription
factor IIA, 1, 19/37kDa protein.
Length = 376
Score = 29.9 bits (64), Expect = 9.2
Identities = 20/55 (36%), Positives = 28/55 (50%)
Frame = +2
Query: 122 EDKEVTVETNGQEENAKTENSEDETELDIGPGLFGKSNIILVM*IYIEINFCKNK 286
EDKE +GQ E NSED+ + G LF N+++ Y +I+ KNK
Sbjct: 297 EDKEKDGAEDGQVEEEPL-NSEDDVSDEEGQELFDTENVVVCQ--YDKIHRSKNK 348
>AL669984-2|CAI16682.1| 3122|Homo sapiens laminin, alpha 2 (merosin,
congenital muscular dystrophy) protein.
Length = 3122
Score = 29.9 bits (64), Expect = 9.2
Identities = 15/38 (39%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Frame = +1
Query: 544 DLLNY-FKQFQEVENVIMRRYVEKSTKETLVQGFCICY 654
DL+ + K +E++ ++ RRY S K+ V G CICY
Sbjct: 254 DLMMFAHKDPREIDPIVTRRYYY-SVKDISVGGMCICY 290
>AL590613-1|CAH70771.1| 3122|Homo sapiens laminin, alpha 2 (merosin,
congenital muscular dystrophy) protein.
Length = 3122
Score = 29.9 bits (64), Expect = 9.2
Identities = 15/38 (39%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Frame = +1
Query: 544 DLLNY-FKQFQEVENVIMRRYVEKSTKETLVQGFCICY 654
DL+ + K +E++ ++ RRY S K+ V G CICY
Sbjct: 254 DLMMFAHKDPREIDPIVTRRYYY-SVKDISVGGMCICY 290
>AL583853-1|CAH70492.1| 3122|Homo sapiens laminin, alpha 2 (merosin,
congenital muscular dystrophy) protein.
Length = 3122
Score = 29.9 bits (64), Expect = 9.2
Identities = 15/38 (39%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Frame = +1
Query: 544 DLLNY-FKQFQEVENVIMRRYVEKSTKETLVQGFCICY 654
DL+ + K +E++ ++ RRY S K+ V G CICY
Sbjct: 254 DLMMFAHKDPREIDPIVTRRYYY-SVKDISVGGMCICY 290
>AL513527-1|CAI15185.1| 3122|Homo sapiens laminin, alpha 2 (merosin,
congenital muscular dystrophy) protein.
Length = 3122
Score = 29.9 bits (64), Expect = 9.2
Identities = 15/38 (39%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Frame = +1
Query: 544 DLLNY-FKQFQEVENVIMRRYVEKSTKETLVQGFCICY 654
DL+ + K +E++ ++ RRY S K+ V G CICY
Sbjct: 254 DLMMFAHKDPREIDPIVTRRYYY-SVKDISVGGMCICY 290
>AL445439-1|CAH72952.1| 3122|Homo sapiens laminin, alpha 2 (merosin,
congenital muscular dystrophy) protein.
Length = 3122
Score = 29.9 bits (64), Expect = 9.2
Identities = 15/38 (39%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Frame = +1
Query: 544 DLLNY-FKQFQEVENVIMRRYVEKSTKETLVQGFCICY 654
DL+ + K +E++ ++ RRY S K+ V G CICY
Sbjct: 254 DLMMFAHKDPREIDPIVTRRYYY-SVKDISVGGMCICY 290
>AL356124-1|CAI22470.1| 3122|Homo sapiens laminin, alpha 2 (merosin,
congenital muscular dystrophy) protein.
Length = 3122
Score = 29.9 bits (64), Expect = 9.2
Identities = 15/38 (39%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Frame = +1
Query: 544 DLLNY-FKQFQEVENVIMRRYVEKSTKETLVQGFCICY 654
DL+ + K +E++ ++ RRY S K+ V G CICY
Sbjct: 254 DLMMFAHKDPREIDPIVTRRYYY-SVKDISVGGMCICY 290
>AJ628418-1|CAF31522.1| 600|Homo sapiens keratin 3 protein.
Length = 600
Score = 29.9 bits (64), Expect = 9.2
Identities = 23/88 (26%), Positives = 38/88 (43%), Gaps = 2/88 (2%)
Frame = +1
Query: 382 LNKSTSGLLEVSEDNKKVRRNPEQPLPEMNE--ELRKEICNRSIYAKGFAKDASLDDLLN 555
LN+ L E KK N + + E + E+ + N + A + DDL
Sbjct: 393 LNRMIQRLRAEIEGVKKQNANLQTAIAEAEQHGEMALKDANAKLQELQAALQQAKDDLAR 452
Query: 556 YFKQFQEVENVIMRRYVEKSTKETLVQG 639
+ +QE+ NV + VE +T L++G
Sbjct: 453 LLRDYQELMNVKLALDVEIATYRKLLEG 480
>AC010582-2|AAF26776.1| 376|Homo sapiens TFIIA-42 protein.
Length = 376
Score = 29.9 bits (64), Expect = 9.2
Identities = 20/55 (36%), Positives = 28/55 (50%)
Frame = +2
Query: 122 EDKEVTVETNGQEENAKTENSEDETELDIGPGLFGKSNIILVM*IYIEINFCKNK 286
EDKE +GQ E NSED+ + G LF N+++ Y +I+ KNK
Sbjct: 297 EDKEKDGAEDGQVEEEPL-NSEDDVSDEEGQELFDTENVVVCQ--YDKIHRSKNK 348
>AB210026-1|BAE06108.1| 2018|Homo sapiens MYH10 variant protein
protein.
Length = 2018
Score = 29.9 bits (64), Expect = 9.2
Identities = 29/112 (25%), Positives = 52/112 (46%), Gaps = 4/112 (3%)
Frame = +1
Query: 316 EILTKFNRLAKLTEDTDVIANALNKSTSGLLEVSEDNK---KVRRNPEQPLPEMNEELRK 486
EIL ++ +K ++ ++ + + + +S L E E K K+R E + ++ E L+K
Sbjct: 1028 EILLLEDQNSKFIKEKKLMEDRIAECSSQLAEEEEKAKNLAKIRNKQEVMISDLEERLKK 1087
Query: 487 EICNRSIYAKGFAK-DASLDDLLNYFKQFQEVENVIMRRYVEKSTKETLVQG 639
E R K K D DL + Q E++ I ++ + KE +QG
Sbjct: 1088 EEKTRQELEKAKRKLDGETTDLQD---QIAELQAQIDELKLQLAKKEEELQG 1136
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 90,669,625
Number of Sequences: 237096
Number of extensions: 1734421
Number of successful extensions: 5869
Number of sequences better than 10.0: 81
Number of HSP's better than 10.0 without gapping: 5359
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5809
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8119219030
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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