Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1980
(701 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF003140-8|AAB54169.1| 396|Caenorhabditis elegans Hypothetical ... 163 1e-40
AF039718-5|AAP68905.1| 760|Caenorhabditis elegans Prion-like-(q... 56 2e-08
AF039718-4|AAP68906.2| 696|Caenorhabditis elegans Prion-like-(q... 56 2e-08
U23515-7|AAK93859.3| 868|Caenorhabditis elegans Larp (rna bindi... 54 7e-08
U23515-6|ABC71805.1| 1065|Caenorhabditis elegans Larp (rna bindi... 54 7e-08
AL032655-2|CAB60457.1| 561|Caenorhabditis elegans Hypothetical ... 31 0.60
Z82259-1|CAB05126.3| 437|Caenorhabditis elegans Hypothetical pr... 31 1.1
AY305849-1|AAR11993.1| 437|Caenorhabditis elegans nuclear recep... 31 1.1
AY204184-1|AAO39188.1| 353|Caenorhabditis elegans nuclear recep... 31 1.1
U00065-2|AAL27237.1| 672|Caenorhabditis elegans Prion-like-(q/n... 30 1.8
Z81069-3|CAB02989.1| 352|Caenorhabditis elegans Hypothetical pr... 29 2.4
AL031629-6|CAA20980.2| 948|Caenorhabditis elegans Hypothetical ... 29 2.4
AF016669-2|AAB66099.2| 455|Caenorhabditis elegans Hypothetical ... 29 2.4
M14334-2|AAA28071.1| 145|Caenorhabditis elegans protein ( C.ele... 29 3.2
AF016417-3|AAB65281.1| 457|Caenorhabditis elegans Hypothetical ... 29 3.2
AC006774-1|AAF60615.1| 145|Caenorhabditis elegans Heat shock pr... 29 3.2
Z70211-3|CAA94156.1| 363|Caenorhabditis elegans Hypothetical pr... 29 4.3
AL032656-1|CAA21730.1| 223|Caenorhabditis elegans Hypothetical ... 29 4.3
AF003130-3|AAB54123.1| 849|Caenorhabditis elegans Hypothetical ... 29 4.3
Z81487-7|CAB04001.2| 495|Caenorhabditis elegans Hypothetical pr... 28 5.6
Z81057-1|CAB02914.2| 460|Caenorhabditis elegans Hypothetical pr... 28 5.6
Z29645-1|CAA82753.1| 522|Caenorhabditis elegans kinesin light c... 28 5.6
Z29644-1|CAA82752.1| 540|Caenorhabditis elegans kinesin light c... 28 5.6
U58728-1|AAB00588.1| 430|Caenorhabditis elegans Temporarily ass... 28 5.6
U55369-14|AAN84862.1| 540|Caenorhabditis elegans Kinesin light ... 28 5.6
U55369-13|AAN84863.1| 501|Caenorhabditis elegans Kinesin light ... 28 5.6
U55369-12|AAK52182.1| 522|Caenorhabditis elegans Kinesin light ... 28 5.6
U55369-11|AAT68902.1| 531|Caenorhabditis elegans Kinesin light ... 28 5.6
AL021470-4|CAA16294.2| 495|Caenorhabditis elegans Hypothetical ... 28 5.6
Z83731-9|CAH10802.1| 1364|Caenorhabditis elegans Hypothetical pr... 28 7.4
Z83731-8|CAH10801.1| 1490|Caenorhabditis elegans Hypothetical pr... 28 7.4
Z81505-5|CAH10795.1| 1364|Caenorhabditis elegans Hypothetical pr... 28 7.4
Z81505-4|CAH10794.1| 1490|Caenorhabditis elegans Hypothetical pr... 28 7.4
Z68752-7|CAA92982.2| 693|Caenorhabditis elegans Hypothetical pr... 28 7.4
U40954-8|AAM69083.2| 471|Caenorhabditis elegans Hypothetical pr... 28 7.4
AL033536-3|CAA22142.1| 1564|Caenorhabditis elegans Hypothetical ... 28 7.4
U64837-8|AAB04842.1| 145|Caenorhabditis elegans Heat shock prot... 27 9.8
U64837-5|AAB04839.1| 145|Caenorhabditis elegans Heat shock prot... 27 9.8
U23450-1|AAK31467.2| 422|Caenorhabditis elegans Cpeb polya bind... 27 9.8
K03273-4|AAA28068.1| 145|Caenorhabditis elegans heat shock prot... 27 9.8
K03273-1|AAA28066.1| 146|Caenorhabditis elegans heat shock prot... 27 9.8
AF026215-4|AAB71322.1| 843|Caenorhabditis elegans Hypothetical ... 27 9.8
>AF003140-8|AAB54169.1| 396|Caenorhabditis elegans Hypothetical
protein C44E4.4 protein.
Length = 396
Score = 163 bits (395), Expect = 1e-40
Identities = 71/128 (55%), Positives = 100/128 (78%)
Frame = +1
Query: 217 IIRQVEYYFGDVNLHRDKFLQEQIKLDDGWVPLEILTKFNRLAKLTEDTDVIANALNKST 396
II+Q+EYYFG++NL RDKFLQE++K DDGWVP+ + FNRLA +++DT+ IANA+ S
Sbjct: 16 IIKQLEYYFGNINLPRDKFLQEKLKEDDGWVPITTMLNFNRLASISKDTEKIANAVKNSG 75
Query: 397 SGLLEVSEDNKKVRRNPEQPLPEMNEELRKEICNRSIYAKGFAKDASLDDLLNYFKQFQE 576
SG++ VSEDN+K+RRN E P+PE + E ++I +R++Y KGF+ D LDD++ + QF E
Sbjct: 76 SGIISVSEDNQKIRRNEENPVPENSLEYWQKIKHRTVYMKGFSTDTQLDDIIQWANQFGE 135
Query: 577 VENVIMRR 600
ENV+MRR
Sbjct: 136 TENVLMRR 143
Score = 31.5 bits (68), Expect = 0.60
Identities = 13/17 (76%), Positives = 15/17 (88%)
Frame = +2
Query: 626 RLFKGSVFATFKTREQA 676
R FKGSVF T+KTRE+A
Sbjct: 149 RTFKGSVFITYKTREEA 165
>AF039718-5|AAP68905.1| 760|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 64,
isoform a protein.
Length = 760
Score = 56.4 bits (130), Expect = 2e-08
Identities = 29/71 (40%), Positives = 46/71 (64%)
Frame = +1
Query: 226 QVEYYFGDVNLHRDKFLQEQIKLDDGWVPLEILTKFNRLAKLTEDTDVIANALNKSTSGL 405
Q+EYYF NL D++L+ Q+ D +VP+ +L F ++ +LT D D+I AL +ST+
Sbjct: 145 QLEYYFSRENLSSDRYLKCQMD-SDNYVPINVLAGFPKIMRLTTDVDLIVEALKESTN-- 201
Query: 406 LEVSEDNKKVR 438
+E+ E +KVR
Sbjct: 202 VELDEKFEKVR 212
>AF039718-4|AAP68906.2| 696|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 64,
isoform b protein.
Length = 696
Score = 56.4 bits (130), Expect = 2e-08
Identities = 29/71 (40%), Positives = 46/71 (64%)
Frame = +1
Query: 226 QVEYYFGDVNLHRDKFLQEQIKLDDGWVPLEILTKFNRLAKLTEDTDVIANALNKSTSGL 405
Q+EYYF NL D++L+ Q+ D +VP+ +L F ++ +LT D D+I AL +ST+
Sbjct: 47 QLEYYFSRENLSSDRYLKCQMD-SDNYVPINVLAGFPKIMRLTTDVDLIVEALKESTN-- 103
Query: 406 LEVSEDNKKVR 438
+E+ E +KVR
Sbjct: 104 VELDEKFEKVR 114
>U23515-7|AAK93859.3| 868|Caenorhabditis elegans Larp (rna binding
la related protein)homolog protein 1, isoform a protein.
Length = 868
Score = 54.4 bits (125), Expect = 7e-08
Identities = 26/72 (36%), Positives = 46/72 (63%)
Frame = +1
Query: 223 RQVEYYFGDVNLHRDKFLQEQIKLDDGWVPLEILTKFNRLAKLTEDTDVIANALNKSTSG 402
+Q+EYYF + NL +D FL+ ++ +G++P+ ++ F R+ LTED +I AL ST
Sbjct: 329 KQIEYYFSEENLQKDFFLRRKMG-PEGYLPVALIASFPRVRSLTEDYSLILEALKDSTK- 386
Query: 403 LLEVSEDNKKVR 438
+++S D ++R
Sbjct: 387 -VDMSPDGLQIR 397
>U23515-6|ABC71805.1| 1065|Caenorhabditis elegans Larp (rna binding
la related protein)homolog protein 1, isoform b protein.
Length = 1065
Score = 54.4 bits (125), Expect = 7e-08
Identities = 26/72 (36%), Positives = 46/72 (63%)
Frame = +1
Query: 223 RQVEYYFGDVNLHRDKFLQEQIKLDDGWVPLEILTKFNRLAKLTEDTDVIANALNKSTSG 402
+Q+EYYF + NL +D FL+ ++ +G++P+ ++ F R+ LTED +I AL ST
Sbjct: 526 KQIEYYFSEENLQKDFFLRRKMG-PEGYLPVALIASFPRVRSLTEDYSLILEALKDSTK- 583
Query: 403 LLEVSEDNKKVR 438
+++S D ++R
Sbjct: 584 -VDMSPDGLQIR 594
>AL032655-2|CAB60457.1| 561|Caenorhabditis elegans Hypothetical
protein Y6B3B.4 protein.
Length = 561
Score = 31.5 bits (68), Expect = 0.60
Identities = 27/110 (24%), Positives = 52/110 (47%), Gaps = 4/110 (3%)
Frame = +1
Query: 301 GWVPL-EILTKFNRLAKLTEDTDVIA---NALNKSTSGLLEVSEDNKKVRRNPEQPLPEM 468
G+V + E L K + ++TE+ + +A N+LN E E + ++ R E ++
Sbjct: 67 GYVQVPEELEKDDEWREMTEEEESLALEENSLNLEIKQA-EAMEIDAELERQVEMEADKL 125
Query: 469 NEELRKEICNRSIYAKGFAKDASLDDLLNYFKQFQEVENVIMRRYVEKST 618
E RK N+ K K ++ N+FK F+E+ ++ +E+ +
Sbjct: 126 EREHRK---NQKNLKKEEKKQEKQQEMENFFKVFEEIRSLAWSELMEQES 172
>Z82259-1|CAB05126.3| 437|Caenorhabditis elegans Hypothetical
protein C28D4.1 protein.
Length = 437
Score = 30.7 bits (66), Expect = 1.1
Identities = 17/39 (43%), Positives = 25/39 (64%)
Frame = +2
Query: 104 RKIKMTEDKEVTVETNGQEENAKTENSEDETELDIGPGL 220
RKIK D +V +E +EE A +E+++DE LDI P +
Sbjct: 100 RKIKTEIDGDVKLEI--KEEPADSEDADDECPLDIKPDI 136
>AY305849-1|AAR11993.1| 437|Caenorhabditis elegans nuclear receptor
NHR-100 protein.
Length = 437
Score = 30.7 bits (66), Expect = 1.1
Identities = 17/39 (43%), Positives = 25/39 (64%)
Frame = +2
Query: 104 RKIKMTEDKEVTVETNGQEENAKTENSEDETELDIGPGL 220
RKIK D +V +E +EE A +E+++DE LDI P +
Sbjct: 100 RKIKTEIDGDVKLEI--KEEPADSEDADDECPLDIKPDI 136
>AY204184-1|AAO39188.1| 353|Caenorhabditis elegans nuclear receptor
NHR-100 protein.
Length = 353
Score = 30.7 bits (66), Expect = 1.1
Identities = 17/39 (43%), Positives = 25/39 (64%)
Frame = +2
Query: 104 RKIKMTEDKEVTVETNGQEENAKTENSEDETELDIGPGL 220
RKIK D +V +E +EE A +E+++DE LDI P +
Sbjct: 16 RKIKTEIDGDVKLEI--KEEPADSEDADDECPLDIKPDI 52
>U00065-2|AAL27237.1| 672|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 25
protein.
Length = 672
Score = 29.9 bits (64), Expect = 1.8
Identities = 17/58 (29%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Frame = -1
Query: 377 FAMTSVSSVSLARRLNFVRISNGTHPSSNFICSCRNLSRCRFTSP-K*YSTCRIIPGQ 207
F TS SS +L V++ + P + + +C N S C+++S + Y CR G+
Sbjct: 613 FCTTSSSSSNLCSAGQTVQLDSSNQPINCLVSTCPNNSFCQYSSSGQRYVCCRSTSGK 670
>Z81069-3|CAB02989.1| 352|Caenorhabditis elegans Hypothetical
protein F25H9.3 protein.
Length = 352
Score = 29.5 bits (63), Expect = 2.4
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = +1
Query: 550 LNYFKQFQEVENVIMRRYVEKSTKETLVQGFCI 648
+NYF QF +E V RYV S ++ FC+
Sbjct: 13 INYFTQFTNLEAVKCHRYVLHSQDDSCEGDFCV 45
>AL031629-6|CAA20980.2| 948|Caenorhabditis elegans Hypothetical
protein Y106G6D.7 protein.
Length = 948
Score = 29.5 bits (63), Expect = 2.4
Identities = 18/57 (31%), Positives = 27/57 (47%), Gaps = 2/57 (3%)
Frame = +1
Query: 436 RRNPEQPLPEMNEELRKEICNRS--IYAKGFAKDASLDDLLNYFKQFQEVENVIMRR 600
R + QP EL K I R + GF KD +L+D++ +F ++ N I R
Sbjct: 849 RGDDSQPSQSELMELIKSIGPRGTVLSCNGFPKDVTLEDVVEFFNDYEPDRNSIRIR 905
>AF016669-2|AAB66099.2| 455|Caenorhabditis elegans Hypothetical
protein K10G6.4 protein.
Length = 455
Score = 29.5 bits (63), Expect = 2.4
Identities = 20/60 (33%), Positives = 28/60 (46%)
Frame = +1
Query: 313 LEILTKFNRLAKLTEDTDVIANALNKSTSGLLEVSEDNKKVRRNPEQPLPEMNEELRKEI 492
LE+ + + +L K ED + L K LEVS K + PE E+LRKE+
Sbjct: 351 LEVKSLYEKLQKSAEDRQKVETTL-KLDRDRLEVSLVTMKKKLESTPEAPENVEKLRKEL 409
>M14334-2|AAA28071.1| 145|Caenorhabditis elegans protein (
C.elegans heat shockprotein genes 16-41 and 16-2,
complete cds, flanked byCeRep16 repetitive elements. ).
Length = 145
Score = 29.1 bits (62), Expect = 3.2
Identities = 18/63 (28%), Positives = 30/63 (47%)
Frame = +1
Query: 277 QEQIKLDDGWVPLEILTKFNRLAKLTEDTDVIANALNKSTSGLLEVSEDNKKVRRNPEQP 456
++++K D G+ F+R+ L ED DV A A N S G L + K+ + P
Sbjct: 78 EQELKTDHGYSK----KSFSRVILLPEDVDVGAVASNLSEDGKLSIEAPKKEAVQGRSIP 133
Query: 457 LPE 465
+ +
Sbjct: 134 IQQ 136
>AF016417-3|AAB65281.1| 457|Caenorhabditis elegans Hypothetical
protein F17A9.4 protein.
Length = 457
Score = 29.1 bits (62), Expect = 3.2
Identities = 11/31 (35%), Positives = 19/31 (61%)
Frame = +1
Query: 451 QPLPEMNEELRKEICNRSIYAKGFAKDASLD 543
QP+P E+++ +I +R +YA FA + D
Sbjct: 160 QPVPLSTEQIKTQIIDRFVYAAKFAYETGFD 190
>AC006774-1|AAF60615.1| 145|Caenorhabditis elegans Heat shock
protein protein 16.2 protein.
Length = 145
Score = 29.1 bits (62), Expect = 3.2
Identities = 18/63 (28%), Positives = 30/63 (47%)
Frame = +1
Query: 277 QEQIKLDDGWVPLEILTKFNRLAKLTEDTDVIANALNKSTSGLLEVSEDNKKVRRNPEQP 456
++++K D G+ F+R+ L ED DV A A N S G L + K+ + P
Sbjct: 78 EQELKTDHGYSK----KSFSRVILLPEDVDVGAVASNLSEDGKLSIEAPKKEAVQGRSIP 133
Query: 457 LPE 465
+ +
Sbjct: 134 IQQ 136
>Z70211-3|CAA94156.1| 363|Caenorhabditis elegans Hypothetical
protein K11E4.3 protein.
Length = 363
Score = 28.7 bits (61), Expect = 4.3
Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 2/43 (4%)
Frame = +1
Query: 1 KRGYFFKIVWPYLVYLNFEASINLFSEIR--RYFPLKKNQNDR 123
+RG+F K + YL+ L F N +I +Y LK+ QN +
Sbjct: 38 RRGFFLKNIMFYLLNLKFATKKNCKPKINNLKYMKLKEEQNTK 80
>AL032656-1|CAA21730.1| 223|Caenorhabditis elegans Hypothetical
protein Y106G6E.3 protein.
Length = 223
Score = 28.7 bits (61), Expect = 4.3
Identities = 20/67 (29%), Positives = 31/67 (46%), Gaps = 1/67 (1%)
Frame = +1
Query: 346 KLTEDTDVIANALNKSTSGLLEVSEDNKKVRRNPEQPL-PEMNEELRKEICNRSIYAKGF 522
KLT T + + + S + ++E+ KK + PE+PL E E R C +K
Sbjct: 43 KLTMSTSTLESEKEELNSVEMVLAEEIKKEEKEPEKPLINETMSEDRSVACGNKSDSKEL 102
Query: 523 AKDASLD 543
+ AS D
Sbjct: 103 KEMASPD 109
>AF003130-3|AAB54123.1| 849|Caenorhabditis elegans Hypothetical
protein F55A12.5 protein.
Length = 849
Score = 28.7 bits (61), Expect = 4.3
Identities = 29/117 (24%), Positives = 44/117 (37%)
Frame = +1
Query: 217 IIRQVEYYFGDVNLHRDKFLQEQIKLDDGWVPLEILTKFNRLAKLTEDTDVIANALNKST 396
II Q F D + + +E IK D +L +LAK+TE +N L
Sbjct: 723 IILQTSVMFRDQRMKKFGLEKEMIKFDGATDEEILLQAEQKLAKITETLKTTSNKL---- 778
Query: 397 SGLLEVSEDNKKVRRNPEQPLPEMNEELRKEICNRSIYAKGFAKDASLDDLLNYFKQ 567
S + K + P Q +P +L K + + S G D + L +Q
Sbjct: 779 QNFCTPSSSSVKTHQ-PLQAMPSAVSKLEKSVDHDSKKCLGCQSDEVQEAALRRLEQ 834
>Z81487-7|CAB04001.2| 495|Caenorhabditis elegans Hypothetical
protein Y17D7A.4 protein.
Length = 495
Score = 28.3 bits (60), Expect = 5.6
Identities = 20/69 (28%), Positives = 33/69 (47%)
Frame = +1
Query: 442 NPEQPLPEMNEELRKEICNRSIYAKGFAKDASLDDLLNYFKQFQEVENVIMRRYVEKSTK 621
NPE ++ EEL K I N + + D L L + + Q N+I + +T+
Sbjct: 320 NPEVQR-KIREELDKVIGNDRLISTADKND--LPYLQAFVTETQRTANIIPLNLIHMTTR 376
Query: 622 ETLVQGFCI 648
+T++ GF I
Sbjct: 377 DTVIDGFPI 385
>Z81057-1|CAB02914.2| 460|Caenorhabditis elegans Hypothetical
protein F10D11.2 protein.
Length = 460
Score = 28.3 bits (60), Expect = 5.6
Identities = 13/41 (31%), Positives = 20/41 (48%)
Frame = +1
Query: 463 EMNEELRKEICNRSIYAKGFAKDASLDDLLNYFKQFQEVEN 585
EMN +L I +++IY GF A+ NY + + N
Sbjct: 8 EMNPQLNFPISDKTIYQMGFNSSAAQPSAANYVTESNSLTN 48
>Z29645-1|CAA82753.1| 522|Caenorhabditis elegans kinesin light
chain (isoform 2) protein.
Length = 522
Score = 28.3 bits (60), Expect = 5.6
Identities = 18/52 (34%), Positives = 26/52 (50%)
Frame = +1
Query: 340 LAKLTEDTDVIANALNKSTSGLLEVSEDNKKVRRNPEQPLPEMNEELRKEIC 495
L L E+ I+N L S G V ED + P+Q L ++N+ L K +C
Sbjct: 41 LEALREEHSTISNTLETSVKG---VKEDEAPL---PKQKLSQINDNLDKLVC 86
>Z29644-1|CAA82752.1| 540|Caenorhabditis elegans kinesin light
chain (isoform 1) protein.
Length = 540
Score = 28.3 bits (60), Expect = 5.6
Identities = 18/52 (34%), Positives = 26/52 (50%)
Frame = +1
Query: 340 LAKLTEDTDVIANALNKSTSGLLEVSEDNKKVRRNPEQPLPEMNEELRKEIC 495
L L E+ I+N L S G V ED + P+Q L ++N+ L K +C
Sbjct: 20 LEALREEHSTISNTLETSVKG---VKEDEAPL---PKQKLSQINDNLDKLVC 65
>U58728-1|AAB00588.1| 430|Caenorhabditis elegans Temporarily
assigned gene nameprotein 294 protein.
Length = 430
Score = 28.3 bits (60), Expect = 5.6
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = +2
Query: 104 RKIKMTEDKEVTVETNGQEENAKTENSEDETELDIGP 214
+K K TE+ +E+N E K EN + E IGP
Sbjct: 181 KKAKTTEESVPHIESNVNTELVKEENKKPTPEDSIGP 217
>U55369-14|AAN84862.1| 540|Caenorhabditis elegans Kinesin light
chain protein 2,isoform b protein.
Length = 540
Score = 28.3 bits (60), Expect = 5.6
Identities = 18/52 (34%), Positives = 26/52 (50%)
Frame = +1
Query: 340 LAKLTEDTDVIANALNKSTSGLLEVSEDNKKVRRNPEQPLPEMNEELRKEIC 495
L L E+ I+N L S G V ED + P+Q L ++N+ L K +C
Sbjct: 20 LEALREEHSTISNTLETSVKG---VKEDEAPL---PKQKLSQINDNLDKLVC 65
>U55369-13|AAN84863.1| 501|Caenorhabditis elegans Kinesin light
chain protein 2,isoform c protein.
Length = 501
Score = 28.3 bits (60), Expect = 5.6
Identities = 18/52 (34%), Positives = 26/52 (50%)
Frame = +1
Query: 340 LAKLTEDTDVIANALNKSTSGLLEVSEDNKKVRRNPEQPLPEMNEELRKEIC 495
L L E+ I+N L S G V ED + P+Q L ++N+ L K +C
Sbjct: 20 LEALREEHSTISNTLETSVKG---VKEDEAPL---PKQKLSQINDNLDKLVC 65
>U55369-12|AAK52182.1| 522|Caenorhabditis elegans Kinesin light
chain protein 2,isoform a protein.
Length = 522
Score = 28.3 bits (60), Expect = 5.6
Identities = 18/52 (34%), Positives = 26/52 (50%)
Frame = +1
Query: 340 LAKLTEDTDVIANALNKSTSGLLEVSEDNKKVRRNPEQPLPEMNEELRKEIC 495
L L E+ I+N L S G V ED + P+Q L ++N+ L K +C
Sbjct: 41 LEALREEHSTISNTLETSVKG---VKEDEAPL---PKQKLSQINDNLDKLVC 86
>U55369-11|AAT68902.1| 531|Caenorhabditis elegans Kinesin light
chain protein 2,isoform d protein.
Length = 531
Score = 28.3 bits (60), Expect = 5.6
Identities = 18/52 (34%), Positives = 26/52 (50%)
Frame = +1
Query: 340 LAKLTEDTDVIANALNKSTSGLLEVSEDNKKVRRNPEQPLPEMNEELRKEIC 495
L L E+ I+N L S G V ED + P+Q L ++N+ L K +C
Sbjct: 20 LEALREEHSTISNTLETSVKG---VKEDEAPL---PKQKLSQINDNLDKLVC 65
>AL021470-4|CAA16294.2| 495|Caenorhabditis elegans Hypothetical
protein Y17D7A.4 protein.
Length = 495
Score = 28.3 bits (60), Expect = 5.6
Identities = 20/69 (28%), Positives = 33/69 (47%)
Frame = +1
Query: 442 NPEQPLPEMNEELRKEICNRSIYAKGFAKDASLDDLLNYFKQFQEVENVIMRRYVEKSTK 621
NPE ++ EEL K I N + + D L L + + Q N+I + +T+
Sbjct: 320 NPEVQR-KIREELDKVIGNDRLISTADKND--LPYLQAFVTETQRTANIIPLNLIHMTTR 376
Query: 622 ETLVQGFCI 648
+T++ GF I
Sbjct: 377 DTVIDGFPI 385
>Z83731-9|CAH10802.1| 1364|Caenorhabditis elegans Hypothetical protein
F16A11.3b protein.
Length = 1364
Score = 27.9 bits (59), Expect = 7.4
Identities = 13/32 (40%), Positives = 21/32 (65%)
Frame = +2
Query: 119 TEDKEVTVETNGQEENAKTENSEDETELDIGP 214
TE KE T +T +EE+ +N+EDE ++ + P
Sbjct: 1304 TEKKENTEKT-AEEESENVKNTEDELDIPMDP 1334
>Z83731-8|CAH10801.1| 1490|Caenorhabditis elegans Hypothetical protein
F16A11.3a protein.
Length = 1490
Score = 27.9 bits (59), Expect = 7.4
Identities = 13/32 (40%), Positives = 21/32 (65%)
Frame = +2
Query: 119 TEDKEVTVETNGQEENAKTENSEDETELDIGP 214
TE KE T +T +EE+ +N+EDE ++ + P
Sbjct: 1430 TEKKENTEKT-AEEESENVKNTEDELDIPMDP 1460
>Z81505-5|CAH10795.1| 1364|Caenorhabditis elegans Hypothetical protein
F16A11.3b protein.
Length = 1364
Score = 27.9 bits (59), Expect = 7.4
Identities = 13/32 (40%), Positives = 21/32 (65%)
Frame = +2
Query: 119 TEDKEVTVETNGQEENAKTENSEDETELDIGP 214
TE KE T +T +EE+ +N+EDE ++ + P
Sbjct: 1304 TEKKENTEKT-AEEESENVKNTEDELDIPMDP 1334
>Z81505-4|CAH10794.1| 1490|Caenorhabditis elegans Hypothetical protein
F16A11.3a protein.
Length = 1490
Score = 27.9 bits (59), Expect = 7.4
Identities = 13/32 (40%), Positives = 21/32 (65%)
Frame = +2
Query: 119 TEDKEVTVETNGQEENAKTENSEDETELDIGP 214
TE KE T +T +EE+ +N+EDE ++ + P
Sbjct: 1430 TEKKENTEKT-AEEESENVKNTEDELDIPMDP 1460
>Z68752-7|CAA92982.2| 693|Caenorhabditis elegans Hypothetical
protein T12G3.1 protein.
Length = 693
Score = 27.9 bits (59), Expect = 7.4
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = +1
Query: 409 EVSEDNKKVRRNPEQPLPEMNEELRK 486
E E ++ R PEQ LP NEE K
Sbjct: 633 EAQEAQEEARPEPEQSLPPFNEETEK 658
>U40954-8|AAM69083.2| 471|Caenorhabditis elegans Hypothetical
protein ZK813.5 protein.
Length = 471
Score = 27.9 bits (59), Expect = 7.4
Identities = 11/40 (27%), Positives = 21/40 (52%)
Frame = -3
Query: 699 LAFIKLFPACSLVLNVANTEPLNKRFFCGFLNVSSHNYIL 580
L+F+ + A ++ +NV T+P R+ CG Y++
Sbjct: 156 LSFVSISFASAVFMNVIPTKPFRNRYVCGIDGGGPIGYVI 195
>AL033536-3|CAA22142.1| 1564|Caenorhabditis elegans Hypothetical
protein Y53C10A.9 protein.
Length = 1564
Score = 27.9 bits (59), Expect = 7.4
Identities = 15/39 (38%), Positives = 22/39 (56%)
Frame = -2
Query: 160 LLSIGFNSYLFVLGHFDFSLMENTF*FQKTSLLRLRS*D 44
L +IG ++F L HF F +++NTF S L + S D
Sbjct: 229 LTTIGLPLWMFYLEHFLFGVIKNTFLITLLSTLYIFSMD 267
>U64837-8|AAB04842.1| 145|Caenorhabditis elegans Heat shock protein
protein 16.11 protein.
Length = 145
Score = 27.5 bits (58), Expect = 9.8
Identities = 15/45 (33%), Positives = 22/45 (48%)
Frame = +1
Query: 331 FNRLAKLTEDTDVIANALNKSTSGLLEVSEDNKKVRRNPEQPLPE 465
F+R+ L ED DV A A N S G L + K+ + P+ +
Sbjct: 92 FSRVILLPEDVDVGAVASNLSEDGKLSIEAPKKEAIQGRSIPIQQ 136
>U64837-5|AAB04839.1| 145|Caenorhabditis elegans Heat shock protein
protein 16.1 protein.
Length = 145
Score = 27.5 bits (58), Expect = 9.8
Identities = 15/45 (33%), Positives = 22/45 (48%)
Frame = +1
Query: 331 FNRLAKLTEDTDVIANALNKSTSGLLEVSEDNKKVRRNPEQPLPE 465
F+R+ L ED DV A A N S G L + K+ + P+ +
Sbjct: 92 FSRVILLPEDVDVGAVASNLSEDGKLSIEAPKKEAIQGRSIPIQQ 136
>U23450-1|AAK31467.2| 422|Caenorhabditis elegans Cpeb polya binding
family protein 2 protein.
Length = 422
Score = 27.5 bits (58), Expect = 9.8
Identities = 14/85 (16%), Positives = 37/85 (43%)
Frame = +1
Query: 328 KFNRLAKLTEDTDVIANALNKSTSGLLEVSEDNKKVRRNPEQPLPEMNEELRKEICNRSI 507
+ N++ + T +T+ ++ + + VS + RR + + E+ +R +
Sbjct: 31 QINQILRCTSNTNATSSEIQLRNRQAVIVSNFREPDRRLGRYSKYYYHHNVGPEVYSRKV 90
Query: 508 YAKGFAKDASLDDLLNYFKQFQEVE 582
+ G D+LN+F ++ ++
Sbjct: 91 FVGGLPSCVKESDILNFFSRYGRLQ 115
>K03273-4|AAA28068.1| 145|Caenorhabditis elegans heat shock protein
16-1a protein.
Length = 145
Score = 27.5 bits (58), Expect = 9.8
Identities = 15/45 (33%), Positives = 22/45 (48%)
Frame = +1
Query: 331 FNRLAKLTEDTDVIANALNKSTSGLLEVSEDNKKVRRNPEQPLPE 465
F+R+ L ED DV A A N S G L + K+ + P+ +
Sbjct: 92 FSRVILLPEDVDVGAVASNLSEDGKLSIEAPKKEAIQGRSIPIQQ 136
>K03273-1|AAA28066.1| 146|Caenorhabditis elegans heat shock protein
16-1 protein.
Length = 146
Score = 27.5 bits (58), Expect = 9.8
Identities = 15/45 (33%), Positives = 22/45 (48%)
Frame = +1
Query: 331 FNRLAKLTEDTDVIANALNKSTSGLLEVSEDNKKVRRNPEQPLPE 465
F+R+ L ED DV A A N S G L + K+ + P+ +
Sbjct: 93 FSRVILLPEDVDVGAVASNLSEDGKLSIEAPKKEAIQGRSIPIQQ 137
>AF026215-4|AAB71322.1| 843|Caenorhabditis elegans Hypothetical
protein F09G2.4 protein.
Length = 843
Score = 27.5 bits (58), Expect = 9.8
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = +2
Query: 116 MTEDKEVTVETNGQEENAKTENSEDETELDIG 211
M +DK + N QEEN TE + ++IG
Sbjct: 688 MIDDKNREEDVNDQEENGATEGEGNAEPMEIG 719
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,028,849
Number of Sequences: 27780
Number of extensions: 304414
Number of successful extensions: 1194
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 1098
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1191
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1624019012
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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