Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1976
         (714 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein pr...    25   0.81 
DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc gr...    23   3.3  
DQ855496-1|ABH88183.1|  129|Tribolium castaneum chemosensory pro...    22   5.7  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   5.7  
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    22   5.7  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    22   5.7  
AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.           21   9.9  

>AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein
           protein.
          Length = 392

 Score = 24.6 bits (51), Expect = 0.81
 Identities = 18/78 (23%), Positives = 31/78 (39%), Gaps = 2/78 (2%)
 Frame = -3

Query: 337 QRACGFCPKPNLRFPFQWCSDHGHSCWPHLPYQ**VVLDETTVPLVCASADLINNSRFKI 158
           Q  C +   PN       C+D   SCW        + LD   +P +   +   N + +K 
Sbjct: 15  QLECNWSSGPNATLQSSACTDDLSSCWSEDMGSFSLPLDLEPLPSLFPFSPCNNTANYKS 74

Query: 157 DEDS--TGYVLASSGLAE 110
           +  +  + Y   SS +A+
Sbjct: 75  EAQNQPSSYKQPSSDMAD 92


>DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc
           growth factor 4 protein.
          Length = 431

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 14/30 (46%), Positives = 16/30 (53%)
 Frame = +1

Query: 262 NYARGHYTIGKEIVDLVLDRIRKLADQCTG 351
           +YAR     G  IVD+ LD  R L   CTG
Sbjct: 392 SYARAKGLGGIAIVDITLDDFRGL---CTG 418


>DQ855496-1|ABH88183.1|  129|Tribolium castaneum chemosensory
           protein 10 protein.
          Length = 129

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = -1

Query: 144 RGTCLPAPVSLKKVLKES 91
           RGTC P    LKK L ++
Sbjct: 53  RGTCSPDGEELKKALPDA 70


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = -3

Query: 604  YGGRCHRWLHC 572
            Y G C R+LHC
Sbjct: 1287 YPGDCTRYLHC 1297


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 7/37 (18%), Positives = 19/37 (51%)
 Frame = +1

Query: 595 CRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGASE 705
           C +     RPT+T L++ +  ++ ++   L+ +   +
Sbjct: 730 CWKECPKNRPTFTELSKSLEGLLENVAQYLQIENVEQ 766


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 11/29 (37%), Positives = 16/29 (55%)
 Frame = +1

Query: 577 EAIYDICRRNLDIERPTYTNLNRLIGQIV 663
           E I DIC R+ D       ++NR+ G I+
Sbjct: 510 EQIVDICIRSHDKLCDVCDSVNRIFGFII 538


>AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.
          Length = 290

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 11/47 (23%), Positives = 21/47 (44%)
 Frame = +1

Query: 526 TTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVS 666
           T H    +++    V  E IY+ CR    I +P   + +  +  +V+
Sbjct: 35  TEHNYTHNNEMYHSVKEEPIYESCR--FSINQPYLNHFDNSVTPMVN 79


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 165,992
Number of Sequences: 336
Number of extensions: 3545
Number of successful extensions: 9
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18947110
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)