Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1968
         (622 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT022723-1|AAY55139.1|  705|Drosophila melanogaster RH18934p pro...    29   5.1  
AE014297-2021|AAF55179.1|  705|Drosophila melanogaster CG5038-PA...    29   5.1  

>BT022723-1|AAY55139.1|  705|Drosophila melanogaster RH18934p
           protein.
          Length = 705

 Score = 29.1 bits (62), Expect = 5.1
 Identities = 15/43 (34%), Positives = 24/43 (55%), Gaps = 2/43 (4%)
 Frame = -1

Query: 472 ILFESKIIGLSYYSLLLQYFVFSFSHLRFND--SLYRMKPTYV 350
           +LF+   + +    +LL YF   + HLRF D  SL R + +Y+
Sbjct: 197 MLFKESAVTIPMSCVLLDYFQNGYYHLRFKDQWSLLRTRISYL 239


>AE014297-2021|AAF55179.1|  705|Drosophila melanogaster CG5038-PA
           protein.
          Length = 705

 Score = 29.1 bits (62), Expect = 5.1
 Identities = 15/43 (34%), Positives = 24/43 (55%), Gaps = 2/43 (4%)
 Frame = -1

Query: 472 ILFESKIIGLSYYSLLLQYFVFSFSHLRFND--SLYRMKPTYV 350
           +LF+   + +    +LL YF   + HLRF D  SL R + +Y+
Sbjct: 197 MLFKESAVTIPMSCVLLDYFQNGYYHLRFKDQWSLLRTRISYL 239


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,748,442
Number of Sequences: 53049
Number of extensions: 380904
Number of successful extensions: 615
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 597
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 615
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2559155400
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)