Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1964
         (600 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB023025-1|BAA74592.1|  133|Apis mellifera actin protein.             133   1e-33
DQ257415-1|ABB81846.1|  430|Apis mellifera yellow-like protein p...    27   0.19 
EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          22   5.3  
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      22   5.3  
L10710-1|AAA27730.1|  382|Apis mellifera hyaluronidase protein.        21   9.2  

>AB023025-1|BAA74592.1|  133|Apis mellifera actin protein.
          Length = 133

 Score =  133 bits (322), Expect = 1e-33
 Identities = 63/64 (98%), Positives = 64/64 (100%)
 Frame = -3

Query: 526 ANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQ 347
           ANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPE+KYSVWIGGSILASLSTFQQ
Sbjct: 70  ANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPEKKYSVWIGGSILASLSTFQQ 129

Query: 346 MWIS 335
           MWIS
Sbjct: 130 MWIS 133



 Score = 52.4 bits (120), Expect = 3e-09
 Identities = 22/22 (100%), Positives = 22/22 (100%)
 Frame = -2

Query: 593 GIHETTYNSIMKCDVDIRKDLY 528
           GIHETTYNSIMKCDVDIRKDLY
Sbjct: 48  GIHETTYNSIMKCDVDIRKDLY 69


>DQ257415-1|ABB81846.1|  430|Apis mellifera yellow-like protein
           protein.
          Length = 430

 Score = 26.6 bits (56), Expect = 0.19
 Identities = 19/67 (28%), Positives = 27/67 (40%)
 Frame = +2

Query: 350 LEGREGGEDRSTDPYGVLPLWRSNDLNLHCRWGESCDFLLHTVGDSRVHGGTTGQYGVGR 529
           L+   GG  + T PY   P W  N     C    +  + +H     R+    TG  G+G 
Sbjct: 99  LDTNRGGSPKLT-PY---PNWAQNKAGA-CGSAITTAYRIHADSCDRLWVLDTGTIGIGN 153

Query: 530 TSPYGCP 550
           T+   CP
Sbjct: 154 TTIQACP 160


>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = -2

Query: 518 RIVRWYHHVPWNRRPYAK 465
           RI+ +YH    +++PY K
Sbjct: 424 RIIDYYHSYKMHQKPYNK 441


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = -2

Query: 518 RIVRWYHHVPWNRRPYAK 465
           RI+ +YH    +++PY K
Sbjct: 424 RIIDYYHSYKMHQKPYNK 441


>L10710-1|AAA27730.1|  382|Apis mellifera hyaluronidase protein.
          Length = 382

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 8/22 (36%), Positives = 12/22 (54%)
 Frame = -3

Query: 355 FQQMWISKQEYDESGPSIVHRK 290
           F+Q W S Q Y +    +V R+
Sbjct: 151 FRQNWASLQPYKKLSVEVVRRE 172


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 167,415
Number of Sequences: 438
Number of extensions: 3561
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17604432
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)