Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1962
         (621 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ974163-1|ABJ52803.1|  595|Anopheles gambiae serpin 4B protein.       27   0.64 
CR954256-3|CAJ14144.1|  659|Anopheles gambiae cyclin protein.          25   1.5  
DQ370045-1|ABD18606.1|  285|Anopheles gambiae putative TIL domai...    23   5.9  

>DQ974163-1|ABJ52803.1|  595|Anopheles gambiae serpin 4B protein.
          Length = 595

 Score = 26.6 bits (56), Expect = 0.64
 Identities = 18/66 (27%), Positives = 31/66 (46%), Gaps = 2/66 (3%)
 Frame = +3

Query: 306 KSWITSTTKKQKYQTISADRKRNPKRKT--MTHTNCFPPIELSQ*H*RVLCVSSRYVVES 479
           +S+I   TK +++     D K  P      M H  CFP  E  +   R++ +  ++ V +
Sbjct: 244 ESFIDGATKPREFYP---DGKGQPPVMVDMMAHGGCFPYYESVELDARIIGIPYKHNVST 300

Query: 480 MVTLMP 497
           M  +MP
Sbjct: 301 MYVIMP 306


>CR954256-3|CAJ14144.1|  659|Anopheles gambiae cyclin protein.
          Length = 659

 Score = 25.4 bits (53), Expect = 1.5
 Identities = 11/21 (52%), Positives = 12/21 (57%)
 Frame = +3

Query: 348 TISADRKRNPKRKTMTHTNCF 410
           T  ADR R  + K M HTN F
Sbjct: 557 TNGADRDRGDRSKGMNHTNSF 577


>DQ370045-1|ABD18606.1|  285|Anopheles gambiae putative TIL domain
           protein protein.
          Length = 285

 Score = 23.4 bits (48), Expect = 5.9
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = -3

Query: 508 RYPHGISVTMLSTTYRELTHN 446
           RYP G++ T   TT    TH+
Sbjct: 153 RYPTGVNATRYGTTGGNATHH 173


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 586,041
Number of Sequences: 2352
Number of extensions: 10645
Number of successful extensions: 17
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 60214320
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)