Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1961
         (606 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_03_1403 + 26322172-26322257,26322279-26322448,26322544-263238...    28   6.6  
06_03_1103 - 27615875-27616192                                         28   6.6  

>07_03_1403 +
           26322172-26322257,26322279-26322448,26322544-26323814,
           26323962-26324006
          Length = 523

 Score = 27.9 bits (59), Expect = 6.6
 Identities = 17/61 (27%), Positives = 30/61 (49%), Gaps = 4/61 (6%)
 Frame = +3

Query: 426 FFYCLYEWTSPQLTWC*VVAGVHRHLQRKCATHLKI----*VLRGPVLSYQRLPHIFKTE 593
           FF+  ++ TS  LTW   +   H+H   K    +++     V  G +L+  +L ++F  E
Sbjct: 315 FFFAGHDTTSQLLTWTMFLLSTHQHWMEKLRKEVRMVCNDEVPTGDMLNKLKLVNMFLLE 374

Query: 594 T 596
           T
Sbjct: 375 T 375


>06_03_1103 - 27615875-27616192
          Length = 105

 Score = 27.9 bits (59), Expect = 6.6
 Identities = 12/25 (48%), Positives = 17/25 (68%)
 Frame = +2

Query: 149 VNLKHISPAPPQVANHSAMVLSYYL 223
           V+L  + PAPP  A  +A VL+Y+L
Sbjct: 76  VSLLALVPAPPAAARFAAAVLAYFL 100


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,593,363
Number of Sequences: 37544
Number of extensions: 300213
Number of successful extensions: 457
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 456
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 457
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1442939384
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)