Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1959
(605 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U50468-1|AAA93472.1| 91|Anopheles gambiae protein ( Anopheles ... 50 4e-08
AY334011-1|AAR01136.1| 188|Anopheles gambiae beta-tubulin protein. 34 0.004
AY334010-1|AAR01135.1| 188|Anopheles gambiae beta-tubulin protein. 34 0.004
AY334009-1|AAR01134.1| 188|Anopheles gambiae beta-tubulin protein. 34 0.004
AY334008-1|AAR01133.1| 188|Anopheles gambiae beta-tubulin protein. 34 0.004
AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcript... 24 0.36
AF017062-1|AAC47144.2| 649|Anopheles gambiae soluble guanylyl c... 25 2.5
AY028784-1|AAK32958.2| 499|Anopheles gambiae cytochrome P450 pr... 23 7.7
>U50468-1|AAA93472.1| 91|Anopheles gambiae protein ( Anopheles
gambiae putativetubulin alpha chain mRNA, complete cds.
).
Length = 91
Score = 50.4 bits (115), Expect = 4e-08
Identities = 20/22 (90%), Positives = 21/22 (95%)
Frame = +2
Query: 68 MRECISVHVGQAGVQIGNACWE 133
MRECISVHVGQAGVQIGN CW+
Sbjct: 1 MRECISVHVGQAGVQIGNPCWD 22
Score = 41.1 bits (92), Expect = 3e-05
Identities = 26/68 (38%), Positives = 28/68 (41%)
Frame = +3
Query: 123 PAGSFTAWSTASSLMARCPQTRPSGVETILSTLSSARPELASTYPVXXXXXXXXXXXXXX 302
P T WS AS+ RCP+TR S ST SS R AST PV
Sbjct: 19 PCWDCTVWSMASNRTVRCPRTRRSEAVMTRSTPSSPRLAQASTCPVPCSSIWSRPSSMRC 78
Query: 303 XXAHTDSC 326
A T SC
Sbjct: 79 APARTASC 86
>AY334011-1|AAR01136.1| 188|Anopheles gambiae beta-tubulin protein.
Length = 188
Score = 33.9 bits (74), Expect = 0.004
Identities = 19/48 (39%), Positives = 25/48 (52%)
Frame = +2
Query: 386 HYTIGKEIVDLVLDRIRKLADQCTRSARIPDLPLLRWRSGSGFTSLLM 529
HYT G E+VD VLD +RK + C L +GSG +LL+
Sbjct: 1 HYTEGAELVDAVLDVVRKECENCDCLQGFQLTHSLGGGTGSGMGTLLI 48
Score = 25.8 bits (54), Expect = 1.1
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = +3
Query: 462 LQGFLIFHSFGGGPALGSLPY*WSRLSVDYGKKV 563
LQGF + HS GGG G S++ +Y ++
Sbjct: 26 LQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRI 59
>AY334010-1|AAR01135.1| 188|Anopheles gambiae beta-tubulin protein.
Length = 188
Score = 33.9 bits (74), Expect = 0.004
Identities = 19/48 (39%), Positives = 25/48 (52%)
Frame = +2
Query: 386 HYTIGKEIVDLVLDRIRKLADQCTRSARIPDLPLLRWRSGSGFTSLLM 529
HYT G E+VD VLD +RK + C L +GSG +LL+
Sbjct: 1 HYTEGAELVDAVLDVVRKECENCDCLQGFQLTHSLGGGTGSGMGTLLI 48
Score = 25.8 bits (54), Expect = 1.1
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = +3
Query: 462 LQGFLIFHSFGGGPALGSLPY*WSRLSVDYGKKV 563
LQGF + HS GGG G S++ +Y ++
Sbjct: 26 LQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRI 59
>AY334009-1|AAR01134.1| 188|Anopheles gambiae beta-tubulin protein.
Length = 188
Score = 33.9 bits (74), Expect = 0.004
Identities = 19/48 (39%), Positives = 25/48 (52%)
Frame = +2
Query: 386 HYTIGKEIVDLVLDRIRKLADQCTRSARIPDLPLLRWRSGSGFTSLLM 529
HYT G E+VD VLD +RK + C L +GSG +LL+
Sbjct: 1 HYTEGAELVDAVLDVVRKECENCDCLQGFQLTHSLGGGTGSGMGTLLI 48
Score = 25.8 bits (54), Expect = 1.1
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = +3
Query: 462 LQGFLIFHSFGGGPALGSLPY*WSRLSVDYGKKV 563
LQGF + HS GGG G S++ +Y ++
Sbjct: 26 LQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRI 59
>AY334008-1|AAR01133.1| 188|Anopheles gambiae beta-tubulin protein.
Length = 188
Score = 33.9 bits (74), Expect = 0.004
Identities = 19/48 (39%), Positives = 25/48 (52%)
Frame = +2
Query: 386 HYTIGKEIVDLVLDRIRKLADQCTRSARIPDLPLLRWRSGSGFTSLLM 529
HYT G E+VD VLD +RK + C L +GSG +LL+
Sbjct: 1 HYTEGAELVDAVLDVVRKECENCDCLQGFQLTHSLGGGTGSGMGTLLI 48
Score = 25.8 bits (54), Expect = 1.1
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = +3
Query: 462 LQGFLIFHSFGGGPALGSLPY*WSRLSVDYGKKV 563
LQGF + HS GGG G S++ +Y ++
Sbjct: 26 LQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRI 59
>AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcriptase
protein.
Length = 1248
Score = 23.8 bits (49), Expect(2) = 0.36
Identities = 9/25 (36%), Positives = 15/25 (60%)
Frame = +3
Query: 174 CPQTRPSGVETILSTLSSARPELAS 248
C RPS ++ ++ S RP+LA+
Sbjct: 164 CGSARPSRIDVAFASPSICRPDLAA 188
Score = 21.8 bits (44), Expect(2) = 0.36
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = +3
Query: 117 VMPAGSFTAWSTASSLMARCPQTRPSGV 200
V+ AG F AW TA +T+P G+
Sbjct: 116 VLLAGDFNAWHTAWG----SERTKPKGI 139
>AF017062-1|AAC47144.2| 649|Anopheles gambiae soluble guanylyl
cyclase beta subunit protein.
Length = 649
Score = 24.6 bits (51), Expect = 2.5
Identities = 13/33 (39%), Positives = 16/33 (48%)
Frame = -2
Query: 520 GSEPRAGPPPKEWKIRNPCRPGTLVSELADSVQ 422
G R GP EW+ + P PGT E +D Q
Sbjct: 236 GGPARNGP---EWQQKGPKGPGTTAVERSDHFQ 265
>AY028784-1|AAK32958.2| 499|Anopheles gambiae cytochrome P450
protein.
Length = 499
Score = 23.0 bits (47), Expect = 7.7
Identities = 9/19 (47%), Positives = 10/19 (52%)
Frame = +1
Query: 196 GWRRFFQHFLQRDRSWQAR 252
GW + HF QR R W R
Sbjct: 12 GWLWIYLHFNQRYRFWVER 30
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 706,282
Number of Sequences: 2352
Number of extensions: 15563
Number of successful extensions: 37
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 37
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 58870980
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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