Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1959
(605 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin M... 270 5e-73
AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensor... 270 5e-73
AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin... 270 5e-73
D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin... 268 2e-72
Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical p... 244 3e-65
D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin... 244 3e-65
Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical pr... 243 7e-65
Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical pr... 243 7e-65
D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin... 243 7e-65
U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha ... 239 8e-64
Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical p... 238 2e-63
AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical ... 238 2e-63
Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical pr... 224 3e-59
Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical pr... 221 4e-58
Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical pr... 202 2e-52
AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin... 177 7e-45
Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical pr... 132 2e-31
Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical p... 131 3e-31
Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical pr... 131 4e-31
X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin pr... 129 2e-30
U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory ... 129 2e-30
Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical pr... 127 7e-30
Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical p... 113 7e-26
Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical p... 113 7e-26
Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical p... 73 2e-13
AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin... 73 2e-13
AL161712-9|CAC70134.1| 343|Caenorhabditis elegans Hypothetical ... 32 0.37
AY204179-1|AAO39183.1| 486|Caenorhabditis elegans nuclear recep... 29 2.6
AF078783-3|AAN63404.1| 504|Caenorhabditis elegans Nuclear hormo... 29 2.6
AF078783-2|AAK82901.1| 486|Caenorhabditis elegans Nuclear hormo... 29 2.6
AC199169-10|ABO33258.1| 475|Caenorhabditis elegans Hypothetical... 28 4.5
AF067945-11|AAV28330.1| 1604|Caenorhabditis elegans Mechanosenso... 28 5.9
AF067945-10|AAV28329.1| 1818|Caenorhabditis elegans Mechanosenso... 28 5.9
AF067945-9|AAV28328.1| 1954|Caenorhabditis elegans Mechanosensor... 28 5.9
AF067945-6|AAV28326.1| 1167|Caenorhabditis elegans Mechanosensor... 28 5.9
AF067945-5|AAV28325.1| 1685|Caenorhabditis elegans Mechanosensor... 28 5.9
AF067945-4|AAV28327.1| 1995|Caenorhabditis elegans Mechanosensor... 28 5.9
AF067945-3|AAV28331.1| 2006|Caenorhabditis elegans Mechanosensor... 28 5.9
AF067945-2|AAV28324.1| 2007|Caenorhabditis elegans Mechanosensor... 28 5.9
AC025715-10|ABJ99061.1| 1187|Caenorhabditis elegans Hypothetical... 28 5.9
>U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin
MEC-12 protein.
Length = 450
Score = 270 bits (662), Expect = 5e-73
Identities = 122/155 (78%), Positives = 135/155 (87%)
Frame = +2
Query: 68 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 247
MRE IS+H+GQAGVQIGNACWELYCLEHGIQPDGQMP+DK++GG DDSF+TFFSETG+G+
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGR 60
Query: 248 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 427
HVPRAV VDLEPTV+DE+RTGTYR LFHPEQLITGKEDAANNYARGHYTIGKEI+DL LD
Sbjct: 61 HVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLD 120
Query: 428 RIRKLADQCTRSARIPDLPLLRWRSGSGFTSLLME 532
RIR+LAD CT +GSGFTSLLME
Sbjct: 121 RIRRLADNCTGLQGFLVFHSFGGGTGSGFTSLLME 155
Score = 50.4 bits (115), Expect = 1e-06
Identities = 23/34 (67%), Positives = 24/34 (70%)
Frame = +3
Query: 459 GLQGFLIFHSFGGGPALGSLPY*WSRLSVDYGKK 560
GLQGFL+FHSFGGG G RLSVDYGKK
Sbjct: 131 GLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKK 164
>AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensory
abnormality protein12 protein.
Length = 450
Score = 270 bits (662), Expect = 5e-73
Identities = 122/155 (78%), Positives = 135/155 (87%)
Frame = +2
Query: 68 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 247
MRE IS+H+GQAGVQIGNACWELYCLEHGIQPDGQMP+DK++GG DDSF+TFFSETG+G+
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGR 60
Query: 248 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 427
HVPRAV VDLEPTV+DE+RTGTYR LFHPEQLITGKEDAANNYARGHYTIGKEI+DL LD
Sbjct: 61 HVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLD 120
Query: 428 RIRKLADQCTRSARIPDLPLLRWRSGSGFTSLLME 532
RIR+LAD CT +GSGFTSLLME
Sbjct: 121 RIRRLADNCTGLQGFLVFHSFGGGTGSGFTSLLME 155
Score = 50.4 bits (115), Expect = 1e-06
Identities = 23/34 (67%), Positives = 24/34 (70%)
Frame = +3
Query: 459 GLQGFLIFHSFGGGPALGSLPY*WSRLSVDYGKK 560
GLQGFL+FHSFGGG G RLSVDYGKK
Sbjct: 131 GLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKK 164
>AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin
(tba-3) protein.
Length = 450
Score = 270 bits (662), Expect = 5e-73
Identities = 122/155 (78%), Positives = 135/155 (87%)
Frame = +2
Query: 68 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 247
MRE IS+H+GQAGVQIGNACWELYCLEHGIQPDGQMP+DK++GG DDSF+TFFSETG+G+
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGR 60
Query: 248 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 427
HVPRAV VDLEPTV+DE+RTGTYR LFHPEQLITGKEDAANNYARGHYTIGKEI+DL LD
Sbjct: 61 HVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLD 120
Query: 428 RIRKLADQCTRSARIPDLPLLRWRSGSGFTSLLME 532
RIR+LAD CT +GSGFTSLLME
Sbjct: 121 RIRRLADNCTGLQGFLVFHSFGGGTGSGFTSLLME 155
Score = 50.4 bits (115), Expect = 1e-06
Identities = 23/34 (67%), Positives = 24/34 (70%)
Frame = +3
Query: 459 GLQGFLIFHSFGGGPALGSLPY*WSRLSVDYGKK 560
GLQGFL+FHSFGGG G RLSVDYGKK
Sbjct: 131 GLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKK 164
>D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin
protein.
Length = 449
Score = 268 bits (657), Expect = 2e-72
Identities = 121/154 (78%), Positives = 134/154 (87%)
Frame = +2
Query: 71 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKH 250
RE IS+H+GQAGVQIGNACWELYCLEHGIQPDGQMP+DK++GG DDSF+TFFSETG+G+H
Sbjct: 1 REVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGRH 60
Query: 251 VPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 430
VPRAV VDLEPTV+DE+RTGTYR LFHPEQLITGKEDAANNYARGHYTIGKEI+DL LDR
Sbjct: 61 VPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLDR 120
Query: 431 IRKLADQCTRSARIPDLPLLRWRSGSGFTSLLME 532
IR+LAD CT +GSGFTSLLME
Sbjct: 121 IRRLADNCTGLQGFLVFHSFGGGTGSGFTSLLME 154
Score = 50.4 bits (115), Expect = 1e-06
Identities = 23/34 (67%), Positives = 24/34 (70%)
Frame = +3
Query: 459 GLQGFLIFHSFGGGPALGSLPY*WSRLSVDYGKK 560
GLQGFL+FHSFGGG G RLSVDYGKK
Sbjct: 130 GLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKK 163
>Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical
protein C47B2.3 protein.
Length = 448
Score = 244 bits (598), Expect = 3e-65
Identities = 112/155 (72%), Positives = 130/155 (83%)
Frame = +2
Query: 68 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 247
MRE IS+HVGQAGVQIGNACWELYCLEHGIQPDG MPT T G +SF TFFS+TG+G+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPTQSTNEG--ESFTTFFSDTGSGR 58
Query: 248 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 427
+VPR++FVDLEPTVVDE+RTGTY++LFHPEQ+ITGKEDAANNYARGHYT+GKE++D VLD
Sbjct: 59 YVPRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLD 118
Query: 428 RIRKLADQCTRSARIPDLPLLRWRSGSGFTSLLME 532
RIR+LAD C+ +GSGFTSLLME
Sbjct: 119 RIRRLADNCSGLQGFFVFHSFGGGTGSGFTSLLME 153
Score = 48.8 bits (111), Expect = 3e-06
Identities = 22/34 (64%), Positives = 23/34 (67%)
Frame = +3
Query: 459 GLQGFLIFHSFGGGPALGSLPY*WSRLSVDYGKK 560
GLQGF +FHSFGGG G RLSVDYGKK
Sbjct: 129 GLQGFFVFHSFGGGTGSGFTSLLMERLSVDYGKK 162
>D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin
protein.
Length = 448
Score = 244 bits (598), Expect = 3e-65
Identities = 112/155 (72%), Positives = 130/155 (83%)
Frame = +2
Query: 68 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 247
MRE IS+HVGQAGVQIGNACWELYCLEHGIQPDG MPT T G +SF TFFS+TG+G+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPTQSTNEG--ESFTTFFSDTGSGR 58
Query: 248 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 427
+VPR++FVDLEPTVVDE+RTGTY++LFHPEQ+ITGKEDAANNYARGHYT+GKE++D VLD
Sbjct: 59 YVPRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLD 118
Query: 428 RIRKLADQCTRSARIPDLPLLRWRSGSGFTSLLME 532
RIR+LAD C+ +GSGFTSLLME
Sbjct: 119 RIRRLADNCSGLQGFFVFHSFGGGTGSGFTSLLME 153
Score = 48.8 bits (111), Expect = 3e-06
Identities = 22/34 (64%), Positives = 23/34 (67%)
Frame = +3
Query: 459 GLQGFLIFHSFGGGPALGSLPY*WSRLSVDYGKK 560
GLQGF +FHSFGGG G RLSVDYGKK
Sbjct: 129 GLQGFFVFHSFGGGTGSGFTSLLMERLSVDYGKK 162
>Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical
protein F26E4.8 protein.
Length = 449
Score = 243 bits (595), Expect = 7e-65
Identities = 111/155 (71%), Positives = 130/155 (83%)
Frame = +2
Query: 68 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 247
MRE IS+HVGQAGVQIGNACWELYCLEHGIQPDG MP+D+ G +SF TFFS+TG G+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSDQQADG--ESFTTFFSDTGNGR 58
Query: 248 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 427
+VPR++FVDLEPTVVDE+RTGTY++LFHPEQ+ITGKEDAANNYARGHYT+GKE++D VLD
Sbjct: 59 YVPRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLD 118
Query: 428 RIRKLADQCTRSARIPDLPLLRWRSGSGFTSLLME 532
RIR+LAD C+ +GSGFTSLLME
Sbjct: 119 RIRRLADNCSGLQGFFVFHSFGGGTGSGFTSLLME 153
Score = 48.8 bits (111), Expect = 3e-06
Identities = 22/34 (64%), Positives = 23/34 (67%)
Frame = +3
Query: 459 GLQGFLIFHSFGGGPALGSLPY*WSRLSVDYGKK 560
GLQGF +FHSFGGG G RLSVDYGKK
Sbjct: 129 GLQGFFVFHSFGGGTGSGFTSLLMERLSVDYGKK 162
>Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical
protein F16D3.1 protein.
Length = 447
Score = 243 bits (595), Expect = 7e-65
Identities = 108/155 (69%), Positives = 128/155 (82%)
Frame = +2
Query: 68 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 247
MRE +S+H+GQAGVQIGNACWELYCLEHGI PDG MP D + G D S+NTFFSET +GK
Sbjct: 1 MREIVSIHIGQAGVQIGNACWELYCLEHGITPDGLMPDDTSYGVEDQSYNTFFSETPSGK 60
Query: 248 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 427
HVPRA+FVDLEPTV+DEVRTGTY +LFHPEQLI+GKEDAANNYARGHYTIGKE++D+V+D
Sbjct: 61 HVPRAIFVDLEPTVIDEVRTGTYAKLFHPEQLISGKEDAANNYARGHYTIGKELIDVVMD 120
Query: 428 RIRKLADQCTRSARIPDLPLLRWRSGSGFTSLLME 532
R+R+L ++C +GSGFTSL+ME
Sbjct: 121 RVRRLTERCQSLQGFLIFHSFGGGTGSGFTSLVME 155
Score = 48.0 bits (109), Expect = 5e-06
Identities = 22/33 (66%), Positives = 23/33 (69%)
Frame = +3
Query: 462 LQGFLIFHSFGGGPALGSLPY*WSRLSVDYGKK 560
LQGFLIFHSFGGG G RLS+DYGKK
Sbjct: 132 LQGFLIFHSFGGGTGSGFTSLVMERLSIDYGKK 164
>D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin
protein.
Length = 449
Score = 243 bits (595), Expect = 7e-65
Identities = 111/155 (71%), Positives = 130/155 (83%)
Frame = +2
Query: 68 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 247
MRE IS+HVGQAGVQIGNACWELYCLEHGIQPDG MP+D+ G +SF TFFS+TG G+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSDQQADG--ESFTTFFSDTGNGR 58
Query: 248 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 427
+VPR++FVDLEPTVVDE+RTGTY++LFHPEQ+ITGKEDAANNYARGHYT+GKE++D VLD
Sbjct: 59 YVPRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLD 118
Query: 428 RIRKLADQCTRSARIPDLPLLRWRSGSGFTSLLME 532
RIR+LAD C+ +GSGFTSLLME
Sbjct: 119 RIRRLADNCSGLQGFFVFHSFGGGTGSGFTSLLME 153
Score = 48.8 bits (111), Expect = 3e-06
Identities = 22/34 (64%), Positives = 23/34 (67%)
Frame = +3
Query: 459 GLQGFLIFHSFGGGPALGSLPY*WSRLSVDYGKK 560
GLQGF +FHSFGGG G RLSVDYGKK
Sbjct: 129 GLQGFFVFHSFGGGTGSGFTSLLMERLSVDYGKK 162
>U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha
protein 9 protein.
Length = 456
Score = 239 bits (586), Expect = 8e-64
Identities = 107/156 (68%), Positives = 127/156 (81%)
Frame = +2
Query: 65 KMRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAG 244
+ RE IS+HVGQAGVQ+GNACWELYCLEHGIQPDG + + ++G DDSFNTFFSET AG
Sbjct: 5 RSREVISIHVGQAGVQMGNACWELYCLEHGIQPDGMINEEDSLGVDDDSFNTFFSETMAG 64
Query: 245 KHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVL 424
KHVPRA+ VDLEPT +DE+RTGTY+ LFHPEQL+TGKEDAANNYARGHYTIGKEI+D+V+
Sbjct: 65 KHVPRAIMVDLEPTPIDEIRTGTYKTLFHPEQLLTGKEDAANNYARGHYTIGKEIIDVVM 124
Query: 425 DRIRKLADQCTRSARIPDLPLLRWRSGSGFTSLLME 532
DR+R+L + C +GSGFT+LLME
Sbjct: 125 DRVRRLVENCRGLQGFLVFHSFGGGTGSGFTALLME 160
Score = 50.4 bits (115), Expect = 1e-06
Identities = 23/34 (67%), Positives = 24/34 (70%)
Frame = +3
Query: 459 GLQGFLIFHSFGGGPALGSLPY*WSRLSVDYGKK 560
GLQGFL+FHSFGGG G RLSVDYGKK
Sbjct: 136 GLQGFLVFHSFGGGTGSGFTALLMERLSVDYGKK 169
>Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 238 bits (583), Expect = 2e-63
Identities = 109/155 (70%), Positives = 128/155 (82%)
Frame = +2
Query: 68 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 247
MRE IS+HVGQAGVQIGNACWELYCLEHGIQPDG MP+++ GG SF TFFS+TG G+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSEQQNEGG--SFTTFFSDTGNGR 58
Query: 248 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 427
+VPR++FVDLEPTVVDE+RTG Y++LFHPEQ+ITGKEDAANNYARGHYT+GKE++D LD
Sbjct: 59 YVPRSIFVDLEPTVVDEIRTGNYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTTLD 118
Query: 428 RIRKLADQCTRSARIPDLPLLRWRSGSGFTSLLME 532
RIR+LAD C+ +GSGFTSLLME
Sbjct: 119 RIRRLADNCSGLQGFFVFHSFGGGTGSGFTSLLME 153
Score = 48.8 bits (111), Expect = 3e-06
Identities = 22/34 (64%), Positives = 23/34 (67%)
Frame = +3
Query: 459 GLQGFLIFHSFGGGPALGSLPY*WSRLSVDYGKK 560
GLQGF +FHSFGGG G RLSVDYGKK
Sbjct: 129 GLQGFFVFHSFGGGTGSGFTSLLMERLSVDYGKK 162
>AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 238 bits (583), Expect = 2e-63
Identities = 109/155 (70%), Positives = 128/155 (82%)
Frame = +2
Query: 68 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 247
MRE IS+HVGQAGVQIGNACWELYCLEHGIQPDG MP+++ GG SF TFFS+TG G+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSEQQNEGG--SFTTFFSDTGNGR 58
Query: 248 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 427
+VPR++FVDLEPTVVDE+RTG Y++LFHPEQ+ITGKEDAANNYARGHYT+GKE++D LD
Sbjct: 59 YVPRSIFVDLEPTVVDEIRTGNYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTTLD 118
Query: 428 RIRKLADQCTRSARIPDLPLLRWRSGSGFTSLLME 532
RIR+LAD C+ +GSGFTSLLME
Sbjct: 119 RIRRLADNCSGLQGFFVFHSFGGGTGSGFTSLLME 153
Score = 48.8 bits (111), Expect = 3e-06
Identities = 22/34 (64%), Positives = 23/34 (67%)
Frame = +3
Query: 459 GLQGFLIFHSFGGGPALGSLPY*WSRLSVDYGKK 560
GLQGF +FHSFGGG G RLSVDYGKK
Sbjct: 129 GLQGFFVFHSFGGGTGSGFTSLLMERLSVDYGKK 162
>Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical
protein T28D6.2 protein.
Length = 444
Score = 224 bits (548), Expect = 3e-59
Identities = 104/155 (67%), Positives = 120/155 (77%)
Frame = +2
Query: 68 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 247
MRE IS+HVGQAGVQIGNACWELYCLEHGI PDG T G S TFFS+TG G+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGILPDG---TSMEPDGNSGSLGTFFSDTGYGR 57
Query: 248 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 427
HVPR++FVDLEPTVVDE+RTG Y++LFHPEQ++TGKEDAANNYARGHYT+GKEI+D LD
Sbjct: 58 HVPRSIFVDLEPTVVDEIRTGAYKKLFHPEQMLTGKEDAANNYARGHYTVGKEIIDTTLD 117
Query: 428 RIRKLADQCTRSARIPDLPLLRWRSGSGFTSLLME 532
RIR+LA+ C +GSGFTS+LME
Sbjct: 118 RIRRLANNCEGLQGFFVFHSFGGGTGSGFTSMLME 152
Score = 45.6 bits (103), Expect = 3e-05
Identities = 20/34 (58%), Positives = 22/34 (64%)
Frame = +3
Query: 459 GLQGFLIFHSFGGGPALGSLPY*WSRLSVDYGKK 560
GLQGF +FHSFGGG G RLS +YGKK
Sbjct: 128 GLQGFFVFHSFGGGTGSGFTSMLMERLSAEYGKK 161
>Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical
protein F32H2.9 protein.
Length = 464
Score = 221 bits (539), Expect = 4e-58
Identities = 101/154 (65%), Positives = 119/154 (77%)
Frame = +2
Query: 71 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKH 250
RE IS+HVGQAGVQIGNACWEL+CLEHGIQPDG D T ++ NTFF+ET GKH
Sbjct: 8 REVISIHVGQAGVQIGNACWELFCLEHGIQPDGYHVEDDTYDEETETINTFFAETAGGKH 67
Query: 251 VPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 430
VPR +FVDLEPTVVDEVRTGTYR LFHPEQL++GKEDAAN YARG YTIG+E++D+V+DR
Sbjct: 68 VPRCLFVDLEPTVVDEVRTGTYRSLFHPEQLLSGKEDAANCYARGRYTIGREMIDVVMDR 127
Query: 431 IRKLADQCTRSARIPDLPLLRWRSGSGFTSLLME 532
+++LA+ C +GSGF SLLME
Sbjct: 128 VKRLAENCNGLQGFVIFHSFGGGTGSGFLSLLME 161
Score = 48.4 bits (110), Expect = 4e-06
Identities = 22/34 (64%), Positives = 24/34 (70%)
Frame = +3
Query: 459 GLQGFLIFHSFGGGPALGSLPY*WSRLSVDYGKK 560
GLQGF+IFHSFGGG G L RLS +YGKK
Sbjct: 137 GLQGFVIFHSFGGGTGSGFLSLLMERLSTEYGKK 170
>Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical
protein ZK899.4 protein.
Length = 452
Score = 202 bits (492), Expect = 2e-52
Identities = 95/173 (54%), Positives = 120/173 (69%), Gaps = 1/173 (0%)
Frame = +2
Query: 71 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKH 250
REC+S+H+GQAG QIGNACWELYC+EHG+ G + ++ S FFSE+ GKH
Sbjct: 6 RECVSIHIGQAGAQIGNACWELYCIEHGLDEAGFLKEEEK-NKKQQSLQAFFSESMNGKH 64
Query: 251 VPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 430
VPRA++VDLEPTV+DE+R G Y LFHP+Q+I GKEDAANNYARGHYTIGKE++D+VLDR
Sbjct: 65 VPRAIYVDLEPTVLDEIRNGVYGNLFHPDQIINGKEDAANNYARGHYTIGKELIDVVLDR 124
Query: 431 IRKLADQCTRSARIPDLPLLRWRSGSGFTSLLMEP-SLR*LRQESLNLGVRPS 586
IRK + C +GSGF+SLLME S+ ++ L V P+
Sbjct: 125 IRKQTENCEGLQGFLVFHSFGGGTGSGFSSLLMERLSVEFGKKSKLEFSVYPA 177
>AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin
(tba-6) protein.
Length = 435
Score = 177 bits (430), Expect = 7e-45
Identities = 81/133 (60%), Positives = 99/133 (74%)
Frame = +2
Query: 134 LYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGT 313
++CLEHGIQPDG D T ++ NTFF+ET GKHVPR +FVDLEPTVVDEVRTGT
Sbjct: 1 MFCLEHGIQPDGYHVEDDTYDEETETINTFFAETAGGKHVPRCLFVDLEPTVVDEVRTGT 60
Query: 314 YRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTRSARIPDLPLLR 493
YR LFHPEQL++GKEDAAN YARG YTIG+E++D+V+DR+++LA+ C
Sbjct: 61 YRSLFHPEQLLSGKEDAANCYARGRYTIGREMIDVVMDRVKRLAENCNGLQGFVIFHSFG 120
Query: 494 WRSGSGFTSLLME 532
+GSGF SLLME
Sbjct: 121 GGTGSGFLSLLME 133
Score = 48.4 bits (110), Expect = 4e-06
Identities = 22/34 (64%), Positives = 24/34 (70%)
Frame = +3
Query: 459 GLQGFLIFHSFGGGPALGSLPY*WSRLSVDYGKK 560
GLQGF+IFHSFGGG G L RLS +YGKK
Sbjct: 109 GLQGFVIFHSFGGGTGSGFLSLLMERLSTEYGKK 142
>Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical
protein C54C6.2 protein.
Length = 444
Score = 132 bits (319), Expect = 2e-31
Identities = 68/154 (44%), Positives = 91/154 (59%)
Frame = +2
Query: 68 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 247
MRE + V GQ G QIG WE+ EHGIQPDG + + + N +++E GK
Sbjct: 1 MREIVHVQAGQCGNQIGAKFWEVISDEHGIQPDGTYKGESDLQL--ERINVYYNEANGGK 58
Query: 248 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 427
+VPRAV VDLEP +D VR+G + QLF P+ + G+ A NN+A+GHYT G E+VD VLD
Sbjct: 59 YVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLD 118
Query: 428 RIRKLADQCTRSARIPDLPLLRWRSGSGFTSLLM 529
+RK A+ C L +GSG +LL+
Sbjct: 119 VVRKEAEGCDCLQGFQLTHSLGGGTGSGMGTLLI 152
>Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical
protein K01G5.7 protein.
Length = 449
Score = 131 bits (317), Expect = 3e-31
Identities = 68/154 (44%), Positives = 92/154 (59%)
Frame = +2
Query: 68 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 247
MRE + V GQ G QIG+ WE+ EHGIQPDG + + + + +++E GK
Sbjct: 1 MREIVHVQAGQCGNQIGSKFWEVISDEHGIQPDGTFKGESDLQL--ERIDVYYNEANNGK 58
Query: 248 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 427
+VPRAV VDLEP +D VR+G + QLF P+ + G+ A NN+A+GHYT G E+VD VLD
Sbjct: 59 YVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLD 118
Query: 428 RIRKLADQCTRSARIPDLPLLRWRSGSGFTSLLM 529
IRK A+ C L +GSG +LL+
Sbjct: 119 VIRKEAEGCDCLQGFQLTHSLGGGTGSGMGTLLI 152
>Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical
protein C36E8.5 protein.
Length = 450
Score = 131 bits (316), Expect = 4e-31
Identities = 68/154 (44%), Positives = 92/154 (59%)
Frame = +2
Query: 68 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 247
MRE + V GQ G QIG+ WE+ EHGIQPDG + + + + +++E GK
Sbjct: 1 MREIVHVQAGQCGNQIGSKFWEVISDEHGIQPDGTFKGETDLQL--ERIDVYYNEANNGK 58
Query: 248 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 427
+VPRAV VDLEP +D VR+G + QLF P+ + G+ A NN+A+GHYT G E+VD VLD
Sbjct: 59 YVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLD 118
Query: 428 RIRKLADQCTRSARIPDLPLLRWRSGSGFTSLLM 529
IRK A+ C L +GSG +LL+
Sbjct: 119 VIRKEAEGCDCLQGFQLTHSLGGGTGSGMGTLLI 152
>X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin
protein.
Length = 441
Score = 129 bits (311), Expect = 2e-30
Identities = 66/154 (42%), Positives = 91/154 (59%)
Frame = +2
Query: 68 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 247
MRE + + GQ G QIG+ WE+ EHGI P GQ D + + N +++E G+ K
Sbjct: 1 MREIVHIQAGQCGNQIGSKFWEVISDEHGIDPSGQYVGDSDLQL--ERINVYYNEAGSNK 58
Query: 248 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 427
+VPRAV VDLEP +D VR+G + QLF P+ + G+ A NN+A+GHYT G E+VD VLD
Sbjct: 59 YVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNYVFGQSGAGNNWAKGHYTEGAELVDNVLD 118
Query: 428 RIRKLADQCTRSARIPDLPLLRWRSGSGFTSLLM 529
+RK A+ L +GSG +LL+
Sbjct: 119 VVRKEAESTDCLQGFQLTHSLGGGTGSGMGTLLI 152
>U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory
abnormality protein7 protein.
Length = 441
Score = 129 bits (311), Expect = 2e-30
Identities = 66/154 (42%), Positives = 91/154 (59%)
Frame = +2
Query: 68 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 247
MRE + + GQ G QIG+ WE+ EHGI P GQ D + + N +++E G+ K
Sbjct: 1 MREIVHIQAGQCGNQIGSKFWEVISDEHGIDPSGQYVGDSDLQL--ERINVYYNEAGSNK 58
Query: 248 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 427
+VPRAV VDLEP +D VR+G + QLF P+ + G+ A NN+A+GHYT G E+VD VLD
Sbjct: 59 YVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNYVFGQSGAGNNWAKGHYTEGAELVDNVLD 118
Query: 428 RIRKLADQCTRSARIPDLPLLRWRSGSGFTSLLM 529
+RK A+ L +GSG +LL+
Sbjct: 119 VVRKEAESTDCLQGFQLTHSLGGGTGSGMGTLLI 152
>Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical
protein B0272.1 protein.
Length = 444
Score = 127 bits (306), Expect = 7e-30
Identities = 65/154 (42%), Positives = 87/154 (56%)
Frame = +2
Query: 68 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 247
MRE + + GQ G QIG WE+ EHGI P G D + + N +++E GK
Sbjct: 1 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGAYNGDSDLQL--ERINVYYNEASGGK 58
Query: 248 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 427
+VPRA VDLEP +D VR G + QLF P+ + G+ A NN+A+GHYT G E+VD VLD
Sbjct: 59 YVPRACLVDLEPGTMDSVRAGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLD 118
Query: 428 RIRKLADQCTRSARIPDLPLLRWRSGSGFTSLLM 529
+RK A+ C L +GSG +LL+
Sbjct: 119 VVRKEAESCDCLQGFQMTHSLGGGTGSGMGTLLI 152
>Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 113 bits (273), Expect = 7e-26
Identities = 62/154 (40%), Positives = 87/154 (56%)
Frame = +2
Query: 68 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 247
M+E I+V VGQ G QIG WE EHG+Q DG D G + +++ E K
Sbjct: 1 MKEIINVQVGQCGNQIGAKFWEYISEEHGLQTDGTYKGDN--GSQLERITSYYKEMEGRK 58
Query: 248 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 427
+VPRA+ VDL+P ++ VR+ Y +LF PE ++G+ A NN++RG+Y G EIVD VL
Sbjct: 59 YVPRAILVDLDPESINYVRSTQYGKLFDPENAVSGESGAGNNWSRGYYEQGAEIVDKVLS 118
Query: 428 RIRKLADQCTRSARIPDLPLLRWRSGSGFTSLLM 529
IR+ A+ + L +GSG SLL+
Sbjct: 119 VIRREAEAADSLEGFQLIHSLGGGTGSGLGSLLI 152
>Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 113 bits (273), Expect = 7e-26
Identities = 62/154 (40%), Positives = 87/154 (56%)
Frame = +2
Query: 68 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 247
M+E I+V VGQ G QIG WE EHG+Q DG D G + +++ E K
Sbjct: 1 MKEIINVQVGQCGNQIGAKFWEYISEEHGLQTDGTYKGDN--GSQLERITSYYKEMEGRK 58
Query: 248 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 427
+VPRA+ VDL+P ++ VR+ Y +LF PE ++G+ A NN++RG+Y G EIVD VL
Sbjct: 59 YVPRAILVDLDPESINYVRSTQYGKLFDPENAVSGESGAGNNWSRGYYEQGAEIVDKVLS 118
Query: 428 RIRKLADQCTRSARIPDLPLLRWRSGSGFTSLLM 529
IR+ A+ + L +GSG SLL+
Sbjct: 119 VIRREAEAADSLEGFQLIHSLGGGTGSGLGSLLI 152
>Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical
protein F58A4.8 protein.
Length = 444
Score = 72.5 bits (170), Expect = 2e-13
Identities = 49/154 (31%), Positives = 79/154 (51%), Gaps = 3/154 (1%)
Frame = +2
Query: 80 ISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPR 259
++VHVGQ G Q+ A W+ EHGI GQ + + +D + F + +VPR
Sbjct: 8 MTVHVGQCGNQLAQAFWKSMVDEHGINERGQTTHEDDM---NDKKDLLFYQADDDHYVPR 64
Query: 260 AVFVDLEPTVVD-EVRTGTYRQLFHPEQLITGKE--DAANNYARGHYTIGKEIVDLVLDR 430
AV VDLEP V++ +++ + LF+ + + A NN+A G Y G+E+ + ++D
Sbjct: 65 AVLVDLEPRVINGMMQSPNFSNLFNTDNIFMSDHGGGAGNNWASG-YCQGQEVQEKIMDI 123
Query: 431 IRKLADQCTRSARIPDLPLLRWRSGSGFTSLLME 532
I + A+ I + +GSG SLL+E
Sbjct: 124 IIREAENTNNLDGILFTHSVSGGTGSGTGSLLLE 157
>AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin
protein.
Length = 444
Score = 72.5 bits (170), Expect = 2e-13
Identities = 49/154 (31%), Positives = 79/154 (51%), Gaps = 3/154 (1%)
Frame = +2
Query: 80 ISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPR 259
++VHVGQ G Q+ A W+ EHGI GQ + + +D + F + +VPR
Sbjct: 8 MTVHVGQCGNQLAQAFWKSMVDEHGINERGQTTHEDDM---NDKKDLLFYQADDDHYVPR 64
Query: 260 AVFVDLEPTVVD-EVRTGTYRQLFHPEQLITGKE--DAANNYARGHYTIGKEIVDLVLDR 430
AV VDLEP V++ +++ + LF+ + + A NN+A G Y G+E+ + ++D
Sbjct: 65 AVLVDLEPRVINGMMQSPNFSNLFNTDNIFMSDHGGGAGNNWASG-YCQGQEVQEKIMDI 123
Query: 431 IRKLADQCTRSARIPDLPLLRWRSGSGFTSLLME 532
I + A+ I + +GSG SLL+E
Sbjct: 124 IIREAENTNNLDGILFTHSVSGGTGSGTGSLLLE 157
>AL161712-9|CAC70134.1| 343|Caenorhabditis elegans Hypothetical
protein Y66D12A.12 protein.
Length = 343
Score = 31.9 bits (69), Expect = 0.37
Identities = 18/52 (34%), Positives = 31/52 (59%)
Frame = +3
Query: 96 AKPESRSVMPAGSFTAWSTASSLMARCPQTRPSGVETILSTLSSARPELAST 251
A P MP+ S + S++SS M + P+ PS ++T+L+++ + E AST
Sbjct: 189 ATPALLPFMPSSSTFSASSSSSEMEQTPE--PSSLDTVLTSMMNNNEEAAST 238
>AY204179-1|AAO39183.1| 486|Caenorhabditis elegans nuclear receptor
NHR-80 protein.
Length = 486
Score = 29.1 bits (62), Expect = 2.6
Identities = 18/63 (28%), Positives = 29/63 (46%)
Frame = +2
Query: 110 QIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTV 289
QI +C CL +G++P G P I G FF+++G ++ F ++ P
Sbjct: 63 QICRSCRHKKCLSNGMKPGGVQPKKPNIETG----RAFFTKSGLKRN---KKFANVSPQT 115
Query: 290 VDE 298
DE
Sbjct: 116 ADE 118
>AF078783-3|AAN63404.1| 504|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 80, isoform b protein.
Length = 504
Score = 29.1 bits (62), Expect = 2.6
Identities = 18/63 (28%), Positives = 29/63 (46%)
Frame = +2
Query: 110 QIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTV 289
QI +C CL +G++P G P I G FF+++G ++ F ++ P
Sbjct: 81 QICRSCRHKKCLSNGMKPGGVQPKKPNIETG----RAFFTKSGLKRN---KKFANVSPQT 133
Query: 290 VDE 298
DE
Sbjct: 134 ADE 136
>AF078783-2|AAK82901.1| 486|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 80, isoform a protein.
Length = 486
Score = 29.1 bits (62), Expect = 2.6
Identities = 18/63 (28%), Positives = 29/63 (46%)
Frame = +2
Query: 110 QIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTV 289
QI +C CL +G++P G P I G FF+++G ++ F ++ P
Sbjct: 63 QICRSCRHKKCLSNGMKPGGVQPKKPNIETG----RAFFTKSGLKRN---KKFANVSPQT 115
Query: 290 VDE 298
DE
Sbjct: 116 ADE 118
>AC199169-10|ABO33258.1| 475|Caenorhabditis elegans Hypothetical
protein F38A1.7 protein.
Length = 475
Score = 28.3 bits (60), Expect = 4.5
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = -2
Query: 358 FLTSNKLFWMKQLSVCASADLINNSRFKIDED 263
FL K F K ++VC S LI R+ DED
Sbjct: 232 FLNFQKFFNNKDVTVCGSVCLILEKRYPNDED 263
>AF067945-11|AAV28330.1| 1604|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform g protein.
Length = 1604
Score = 27.9 bits (59), Expect = 5.9
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +2
Query: 287 VVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 430
VV +++TG + PE+ + E A+N+Y + Y + K V ++D+
Sbjct: 625 VVHDMKTGEHPGYTKPEEFVRRIESASNDYIK--YDLQKPDVVTIIDK 670
>AF067945-10|AAV28329.1| 1818|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform f protein.
Length = 1818
Score = 27.9 bits (59), Expect = 5.9
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +2
Query: 287 VVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 430
VV +++TG + PE+ + E A+N+Y + Y + K V ++D+
Sbjct: 839 VVHDMKTGEHPGYTKPEEFVRRIESASNDYIK--YDLQKPDVVTIIDK 884
>AF067945-9|AAV28328.1| 1954|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform e protein.
Length = 1954
Score = 27.9 bits (59), Expect = 5.9
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +2
Query: 287 VVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 430
VV +++TG + PE+ + E A+N+Y + Y + K V ++D+
Sbjct: 975 VVHDMKTGEHPGYTKPEEFVRRIESASNDYIK--YDLQKPDVVTIIDK 1020
>AF067945-6|AAV28326.1| 1167|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform c protein.
Length = 1167
Score = 27.9 bits (59), Expect = 5.9
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +2
Query: 287 VVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 430
VV +++TG + PE+ + E A+N+Y + Y + K V ++D+
Sbjct: 1024 VVHDMKTGEHPGYTKPEEFVRRIESASNDYIK--YDLQKPDVVTIIDK 1069
>AF067945-5|AAV28325.1| 1685|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform b protein.
Length = 1685
Score = 27.9 bits (59), Expect = 5.9
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +2
Query: 287 VVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 430
VV +++TG + PE+ + E A+N+Y + Y + K V ++D+
Sbjct: 1024 VVHDMKTGEHPGYTKPEEFVRRIESASNDYIK--YDLQKPDVVTIIDK 1069
>AF067945-4|AAV28327.1| 1995|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform d protein.
Length = 1995
Score = 27.9 bits (59), Expect = 5.9
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +2
Query: 287 VVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 430
VV +++TG + PE+ + E A+N+Y + Y + K V ++D+
Sbjct: 1016 VVHDMKTGEHPGYTKPEEFVRRIESASNDYIK--YDLQKPDVVTIIDK 1061
>AF067945-3|AAV28331.1| 2006|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform h protein.
Length = 2006
Score = 27.9 bits (59), Expect = 5.9
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +2
Query: 287 VVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 430
VV +++TG + PE+ + E A+N+Y + Y + K V ++D+
Sbjct: 1027 VVHDMKTGEHPGYTKPEEFVRRIESASNDYIK--YDLQKPDVVTIIDK 1072
>AF067945-2|AAV28324.1| 2007|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform a protein.
Length = 2007
Score = 27.9 bits (59), Expect = 5.9
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +2
Query: 287 VVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 430
VV +++TG + PE+ + E A+N+Y + Y + K V ++D+
Sbjct: 1028 VVHDMKTGEHPGYTKPEEFVRRIESASNDYIK--YDLQKPDVVTIIDK 1073
>AC025715-10|ABJ99061.1| 1187|Caenorhabditis elegans Hypothetical
protein Y38F2AR.12a protein.
Length = 1187
Score = 27.9 bits (59), Expect = 5.9
Identities = 20/47 (42%), Positives = 22/47 (46%)
Frame = -1
Query: 575 PPSLDFLAVVNGETAPSIRK*TQSRTSTEGVEDQESLQTGYTGQRAC 435
P +L FLAV N E IR TQSR E + G GQ AC
Sbjct: 380 PVALGFLAVANEEMCRPIRTLTQSRGFNPS-EHVLACFGGAGGQHAC 425
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,377,639
Number of Sequences: 27780
Number of extensions: 354592
Number of successful extensions: 975
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 883
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 937
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1300523034
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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