Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1957
         (579 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z99281-11|CAB16517.1|  154|Caenorhabditis elegans Hypothetical p...   208   2e-54
Z81457-5|CAB03817.2|  584|Caenorhabditis elegans Hypothetical pr...    31   0.78 
U53151-3|AAB37067.2|  388|Caenorhabditis elegans Serpentine rece...    29   3.2  
Z73899-2|CAA98074.1|  536|Caenorhabditis elegans Hypothetical pr...    27   9.6  
U97006-1|AAC47965.1| 2076|Caenorhabditis elegans Hypothetical pr...    27   9.6  

>Z99281-11|CAB16517.1|  154|Caenorhabditis elegans Hypothetical
           protein Y57G11C.16 protein.
          Length = 154

 Score =  208 bits (509), Expect = 2e-54
 Identities = 93/131 (70%), Positives = 114/131 (87%)
 Frame = +2

Query: 23  MSLVIPDKFQHILRIMNTNIDGKRKVMFAMTAIKGVGRRYSNIVLKKADIDLDKRAGECT 202
           MSL+IP+KFQHI R+MNTNIDG RKV +A+TAIKGVGRR++ +  +KAD+D++KRAGE T
Sbjct: 1   MSLIIPEKFQHIHRVMNTNIDGNRKVPYALTAIKGVGRRFAFVCCRKADVDVNKRAGELT 60

Query: 203 E*EVEKIITIMSNPRQYKIPDWFLNRQKDIVDGKYSQLTSSNLDSKLREDLERLKKIRAH 382
           E + +KI+TIM NP QYKIP+WFLNRQKDI DGK  QL S+ +D+KLREDLER+KKIR H
Sbjct: 61  EEDFDKIVTIMQNPSQYKIPNWFLNRQKDIKDGKTGQLLSTAVDNKLREDLERMKKIRLH 120

Query: 383 RGMRHYWGLRV 415
           RG+RHYWGLRV
Sbjct: 121 RGLRHYWGLRV 131


>Z81457-5|CAB03817.2|  584|Caenorhabditis elegans Hypothetical
           protein C01G12.7 protein.
          Length = 584

 Score = 30.7 bits (66), Expect = 0.78
 Identities = 17/45 (37%), Positives = 24/45 (53%)
 Frame = +3

Query: 345 VKIWRGSRRFALTEGCDITGAFVCVVSTLRLLAGEEELLVYQRRS 479
           +K +R   + AL     +TGA + + +TL LLA    LL  QR S
Sbjct: 137 IKKYRWGMKMALLFHLCVTGALLSITNTLHLLASGYHLLKRQRNS 181


>U53151-3|AAB37067.2|  388|Caenorhabditis elegans Serpentine
           receptor, class r protein9 protein.
          Length = 388

 Score = 28.7 bits (61), Expect = 3.2
 Identities = 15/48 (31%), Positives = 25/48 (52%), Gaps = 2/48 (4%)
 Frame = -1

Query: 276 FRNQSGILYC--LGFDMIVIIFSTSYSVHSPARLSRSMSAFLRTMLEY 139
           F N + +LYC  LGF+M  IIF + +    P  L   + +  R ++ +
Sbjct: 271 FFNTTPVLYCIILGFNMAAIIFYSVFVSIPPCTLQEHLKSTNRILINH 318


>Z73899-2|CAA98074.1|  536|Caenorhabditis elegans Hypothetical
           protein ZK829.4 protein.
          Length = 536

 Score = 27.1 bits (57), Expect = 9.6
 Identities = 12/40 (30%), Positives = 26/40 (65%), Gaps = 1/40 (2%)
 Frame = +2

Query: 239 NPRQYKIPDWFLNRQKDIVDGKYS-QLTSSNLDSKLREDL 355
           NP  YK+ D++ N+  +++  K + +L S++L  K +++L
Sbjct: 40  NPSFYKMVDFYFNKGAEVIAPKLAEELKSNSLSQKDKKNL 79


>U97006-1|AAC47965.1| 2076|Caenorhabditis elegans Hypothetical protein
            C13F10.4 protein.
          Length = 2076

 Score = 27.1 bits (57), Expect = 9.6
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = +1

Query: 106  CDDGYQRCWPEVLQHCS 156
            C + YQ CWP +L  CS
Sbjct: 1512 CREYYQICWPPILLACS 1528


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,254,461
Number of Sequences: 27780
Number of extensions: 246082
Number of successful extensions: 690
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 668
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 690
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1205362812
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)