Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1955
(641 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC009973-1|AAH09973.1| 650|Homo sapiens dihydrouridine synthase... 33 0.65
BC008362-1|AAH08362.1| 613|Homo sapiens DUS3L protein protein. 33 0.65
BC004549-1|AAH04549.1| 408|Homo sapiens DUS3L protein protein. 33 0.65
AL365411-1|CAB96955.1| 465|Homo sapiens hypothetical protein, s... 33 0.65
AK023958-1|BAB14740.1| 650|Homo sapiens protein ( Homo sapiens ... 33 0.65
AF091072-1|AAC72941.1| 223|Homo sapiens unknown protein. 33 0.65
AY496232-1|AAS77218.1| 211|Homo sapiens truncated alpha-1,4-gal... 31 3.5
AJ251089-1|CAB91983.1| 327|Homo sapiens hypothetical protein pr... 31 3.5
X80818-1|CAA56784.1| 912|Homo sapiens metabotropic glutamate re... 31 4.6
U92457-1|AAB51762.1| 912|Homo sapiens metabotropic glutamate re... 31 4.6
BC130528-1|AAI30529.1| 912|Homo sapiens glutamate receptor, met... 31 4.6
BC130526-1|AAI30527.1| 912|Homo sapiens glutamate receptor, met... 31 4.6
AL590403-1|CAI17348.1| 912|Homo sapiens glutamate receptor, met... 31 4.6
AK131536-1|BAD18673.1| 796|Homo sapiens protein ( Homo sapiens ... 31 4.6
>BC009973-1|AAH09973.1| 650|Homo sapiens dihydrouridine synthase
3-like (S. cerevisiae) protein.
Length = 650
Score = 33.5 bits (73), Expect = 0.65
Identities = 18/40 (45%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Frame = +1
Query: 475 RIVEPSYVGMNNEYRISLA-KKGGGCPIMNIPQRVHQLVR 591
R VE +V +N I L KKGGGC +MN + Q+VR
Sbjct: 383 RTVEVDFVDINVGCPIDLVYKKGGGCALMNRSTKFQQIVR 422
>BC008362-1|AAH08362.1| 613|Homo sapiens DUS3L protein protein.
Length = 613
Score = 33.5 bits (73), Expect = 0.65
Identities = 18/40 (45%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Frame = +1
Query: 475 RIVEPSYVGMNNEYRISLA-KKGGGCPIMNIPQRVHQLVR 591
R VE +V +N I L KKGGGC +MN + Q+VR
Sbjct: 346 RTVEVDFVDINVGCPIDLVYKKGGGCALMNRSTKFQQIVR 385
>BC004549-1|AAH04549.1| 408|Homo sapiens DUS3L protein protein.
Length = 408
Score = 33.5 bits (73), Expect = 0.65
Identities = 18/40 (45%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Frame = +1
Query: 475 RIVEPSYVGMNNEYRISLA-KKGGGCPIMNIPQRVHQLVR 591
R VE +V +N I L KKGGGC +MN + Q+VR
Sbjct: 141 RTVEVDFVDINVGCPIDLVYKKGGGCALMNRSTKFQQIVR 180
>AL365411-1|CAB96955.1| 465|Homo sapiens hypothetical protein,
similar to (AF091072.1) predicted protein [Homo sapiens]
protein.
Length = 465
Score = 33.5 bits (73), Expect = 0.65
Identities = 18/40 (45%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Frame = +1
Query: 475 RIVEPSYVGMNNEYRISLA-KKGGGCPIMNIPQRVHQLVR 591
R VE +V +N I L KKGGGC +MN + Q+VR
Sbjct: 366 RTVEVDFVDINVGCPIDLVYKKGGGCALMNRSTKFQQIVR 405
>AK023958-1|BAB14740.1| 650|Homo sapiens protein ( Homo sapiens
cDNA FLJ13896 fis, clone THYRO1001703, weakly similar to
NIFR3-LIKE PROTEIN. ).
Length = 650
Score = 33.5 bits (73), Expect = 0.65
Identities = 18/40 (45%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Frame = +1
Query: 475 RIVEPSYVGMNNEYRISLA-KKGGGCPIMNIPQRVHQLVR 591
R VE +V +N I L KKGGGC +MN + Q+VR
Sbjct: 383 RTVEVDFVDINVGCPIDLVYKKGGGCALMNRSTKFQQIVR 422
>AF091072-1|AAC72941.1| 223|Homo sapiens unknown protein.
Length = 223
Score = 33.5 bits (73), Expect = 0.65
Identities = 18/40 (45%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Frame = +1
Query: 475 RIVEPSYVGMNNEYRISLA-KKGGGCPIMNIPQRVHQLVR 591
R VE +V +N I L KKGGGC +MN + Q+VR
Sbjct: 7 RTVEVDFVDINVGCPIDLVYKKGGGCALMNRSTKFQQIVR 46
>AY496232-1|AAS77218.1| 211|Homo sapiens truncated
alpha-1,4-galactosyltransferase protein.
Length = 211
Score = 31.1 bits (67), Expect = 3.5
Identities = 12/23 (52%), Positives = 12/23 (52%)
Frame = -2
Query: 418 TCSTCWGVWV*GWRRGTRPSPLG 350
TC TCW W G GT P P G
Sbjct: 144 TCWTCWNSWTCGSCSGTHPWPTG 166
>AJ251089-1|CAB91983.1| 327|Homo sapiens hypothetical protein
protein.
Length = 327
Score = 31.1 bits (67), Expect = 3.5
Identities = 20/61 (32%), Positives = 26/61 (42%), Gaps = 3/61 (4%)
Frame = -2
Query: 220 AFGFCPVLKRDLRQPCSCL---EDPIASPLVHVRLGASCAWRF**DSPSFCNIYCRTRKY 50
A+G P + R R+PC C EDP +P R CA R D P C ++
Sbjct: 161 AWGVFPEVSRAARRPCGCPLGGEDPPGTPAATPRAACCCAPRPAEDEPPAPPAVCPRKRC 220
Query: 49 A 47
A
Sbjct: 221 A 221
>X80818-1|CAA56784.1| 912|Homo sapiens metabotropic glutamate
receptor type 4 protein.
Length = 912
Score = 30.7 bits (66), Expect = 4.6
Identities = 15/35 (42%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Frame = -2
Query: 433 RVERGTCSTC-WGVWV*GWRRGTRPSPLGRLQWGS 332
+V+R TC TC + + R G RP P+ +L+WGS
Sbjct: 551 QVDRYTCKTCPYDMRPTENRTGCRPIPIIKLEWGS 585
>U92457-1|AAB51762.1| 912|Homo sapiens metabotropic glutamate
receptor 4 protein.
Length = 912
Score = 30.7 bits (66), Expect = 4.6
Identities = 15/35 (42%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Frame = -2
Query: 433 RVERGTCSTC-WGVWV*GWRRGTRPSPLGRLQWGS 332
+V+R TC TC + + R G RP P+ +L+WGS
Sbjct: 551 QVDRYTCKTCPYDMRPTENRTGCRPIPIIKLEWGS 585
>BC130528-1|AAI30529.1| 912|Homo sapiens glutamate receptor,
metabotropic 4 protein.
Length = 912
Score = 30.7 bits (66), Expect = 4.6
Identities = 15/35 (42%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Frame = -2
Query: 433 RVERGTCSTC-WGVWV*GWRRGTRPSPLGRLQWGS 332
+V+R TC TC + + R G RP P+ +L+WGS
Sbjct: 551 QVDRYTCKTCPYDMRPTENRTGCRPIPIIKLEWGS 585
>BC130526-1|AAI30527.1| 912|Homo sapiens glutamate receptor,
metabotropic 4 protein.
Length = 912
Score = 30.7 bits (66), Expect = 4.6
Identities = 15/35 (42%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Frame = -2
Query: 433 RVERGTCSTC-WGVWV*GWRRGTRPSPLGRLQWGS 332
+V+R TC TC + + R G RP P+ +L+WGS
Sbjct: 551 QVDRYTCKTCPYDMRPTENRTGCRPIPIIKLEWGS 585
>AL590403-1|CAI17348.1| 912|Homo sapiens glutamate receptor,
metabotropic 4 protein.
Length = 912
Score = 30.7 bits (66), Expect = 4.6
Identities = 15/35 (42%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Frame = -2
Query: 433 RVERGTCSTC-WGVWV*GWRRGTRPSPLGRLQWGS 332
+V+R TC TC + + R G RP P+ +L+WGS
Sbjct: 551 QVDRYTCKTCPYDMRPTENRTGCRPIPIIKLEWGS 585
>AK131536-1|BAD18673.1| 796|Homo sapiens protein ( Homo sapiens
cDNA FLJ16766 fis, clone BRAWH3013197, highly similar
to Metabotropic glutamate receptor 4 precursor. ).
Length = 796
Score = 30.7 bits (66), Expect = 4.6
Identities = 15/35 (42%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Frame = -2
Query: 433 RVERGTCSTC-WGVWV*GWRRGTRPSPLGRLQWGS 332
+V+R TC TC + + R G RP P+ +L+WGS
Sbjct: 435 QVDRYTCKTCPYDMRPTENRTGCRPIPIIKLEWGS 469
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 106,215,390
Number of Sequences: 237096
Number of extensions: 2321261
Number of successful extensions: 5534
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 5313
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5533
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7085195460
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -