Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1955
(641 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81458-4|CAB03824.1| 623|Caenorhabditis elegans Hypothetical pr... 33 0.13
AF078788-1|AAC26965.2| 629|Caenorhabditis elegans Hypothetical ... 31 0.70
Z35662-1|CAA84721.1| 4307|Caenorhabditis elegans Hypothetical pr... 31 0.93
Z35599-4|CAA84661.1| 4307|Caenorhabditis elegans Hypothetical pr... 31 0.93
Z34802-10|CAA84339.1| 4307|Caenorhabditis elegans Hypothetical p... 31 0.93
Z81044-5|CAE17706.2| 460|Caenorhabditis elegans Hypothetical pr... 29 2.8
U64848-9|AAB04887.1| 128|Caenorhabditis elegans Hypothetical pr... 29 3.7
AF067613-14|ABA54416.1| 395|Caenorhabditis elegans Hypothetical... 29 3.7
Z73976-8|CAI79223.1| 215|Caenorhabditis elegans Hypothetical pr... 28 4.9
U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical pr... 28 6.5
AL031633-19|CAA21031.1| 710|Caenorhabditis elegans Hypothetical... 28 6.5
Z99710-9|CAN99658.1| 402|Caenorhabditis elegans Hypothetical pr... 27 8.6
Z99710-8|CAB16868.1| 383|Caenorhabditis elegans Hypothetical pr... 27 8.6
Z27078-8|CAH04706.2| 1446|Caenorhabditis elegans Hypothetical pr... 27 8.6
U88314-9|AAF99881.1| 408|Caenorhabditis elegans Hypothetical pr... 27 8.6
U40958-4|AAA81763.1| 119|Caenorhabditis elegans Hypothetical pr... 27 8.6
U39666-3|AAA80410.2| 178|Caenorhabditis elegans Hypothetical pr... 27 8.6
EF015633-1|ABK20307.1| 383|Caenorhabditis elegans alpha 1,2-fuc... 27 8.6
AL117207-6|CAB60396.2| 372|Caenorhabditis elegans Hypothetical ... 27 8.6
AL110477-5|CAB54329.1| 314|Caenorhabditis elegans Hypothetical ... 27 8.6
>Z81458-4|CAB03824.1| 623|Caenorhabditis elegans Hypothetical
protein C03E10.5 protein.
Length = 623
Score = 33.5 bits (73), Expect = 0.13
Identities = 25/76 (32%), Positives = 35/76 (46%), Gaps = 1/76 (1%)
Frame = +2
Query: 272 SSTGAAKSFCVKLGPVLLRTASPL*TTKR*WTCTSSPTSNPHAPTGATSSSLNTLLGGKK 451
SST + S + + T++P T K T TS+PTS + T A ++ +
Sbjct: 162 SSTASVSSTILSSTATTMVTSTPT-TEKSSTTTTSTPTSEATSTTTAMITTTSGTTENPT 220
Query: 452 TT-CPTK*SELWSHPT 496
TT CPTK HPT
Sbjct: 221 TTDCPTKVCRYGFHPT 236
>AF078788-1|AAC26965.2| 629|Caenorhabditis elegans Hypothetical
protein ZC190.4 protein.
Length = 629
Score = 31.1 bits (67), Expect = 0.70
Identities = 17/44 (38%), Positives = 23/44 (52%)
Frame = +3
Query: 465 RSNQNCGAILRGHEQRIQN*SG*KGRRLPNHEHSTASTPTRSSR 596
R+N+ G L GH+Q IQN S G + N+ T TR+ R
Sbjct: 140 RNNRGNGGHLNGHQQNIQN-SNRSGYNMGNNSQHTVVPTTRTIR 182
>Z35662-1|CAA84721.1| 4307|Caenorhabditis elegans Hypothetical protein
F25F2.2 protein.
Length = 4307
Score = 30.7 bits (66), Expect = 0.93
Identities = 23/70 (32%), Positives = 36/70 (51%), Gaps = 1/70 (1%)
Frame = -3
Query: 480 NSDYFVGHVVF-FPPKSVLSEELVAPVGACGFEVGDEVHVHHLLVVYNGEAVLNKTGPSF 304
NS YFVGH F F +S ++++A V A + G+ V + +V N E++ S
Sbjct: 1478 NSPYFVGHTAFAFVDESDTVDDVLATVTAFDKDRGENGIVTYSIVSGNEESLFKIDAKSG 1537
Query: 303 TQKLFAAPVD 274
+L A P+D
Sbjct: 1538 EVRL-AKPLD 1546
>Z35599-4|CAA84661.1| 4307|Caenorhabditis elegans Hypothetical protein
F25F2.2 protein.
Length = 4307
Score = 30.7 bits (66), Expect = 0.93
Identities = 23/70 (32%), Positives = 36/70 (51%), Gaps = 1/70 (1%)
Frame = -3
Query: 480 NSDYFVGHVVF-FPPKSVLSEELVAPVGACGFEVGDEVHVHHLLVVYNGEAVLNKTGPSF 304
NS YFVGH F F +S ++++A V A + G+ V + +V N E++ S
Sbjct: 1478 NSPYFVGHTAFAFVDESDTVDDVLATVTAFDKDRGENGIVTYSIVSGNEESLFKIDAKSG 1537
Query: 303 TQKLFAAPVD 274
+L A P+D
Sbjct: 1538 EVRL-AKPLD 1546
>Z34802-10|CAA84339.1| 4307|Caenorhabditis elegans Hypothetical
protein F25F2.2 protein.
Length = 4307
Score = 30.7 bits (66), Expect = 0.93
Identities = 23/70 (32%), Positives = 36/70 (51%), Gaps = 1/70 (1%)
Frame = -3
Query: 480 NSDYFVGHVVF-FPPKSVLSEELVAPVGACGFEVGDEVHVHHLLVVYNGEAVLNKTGPSF 304
NS YFVGH F F +S ++++A V A + G+ V + +V N E++ S
Sbjct: 1478 NSPYFVGHTAFAFVDESDTVDDVLATVTAFDKDRGENGIVTYSIVSGNEESLFKIDAKSG 1537
Query: 303 TQKLFAAPVD 274
+L A P+D
Sbjct: 1538 EVRL-AKPLD 1546
>Z81044-5|CAE17706.2| 460|Caenorhabditis elegans Hypothetical
protein C30H6.11 protein.
Length = 460
Score = 29.1 bits (62), Expect = 2.8
Identities = 21/63 (33%), Positives = 29/63 (46%)
Frame = +2
Query: 329 TASPL*TTKR*WTCTSSPTSNPHAPTGATSSSLNTLLGGKKTTCPTK*SELWSHPTWA*T 508
T +P TT T T++PT+ APT T++ T TT T + + PT T
Sbjct: 172 TTTPTTTTTTPTTTTTTPTTTTTAPTTTTTTPTTTTT--TPTTTTTVPTTTTTTPTTTTT 229
Query: 509 TNT 517
T T
Sbjct: 230 TTT 232
Score = 28.3 bits (60), Expect = 4.9
Identities = 21/63 (33%), Positives = 30/63 (47%)
Frame = +2
Query: 329 TASPL*TTKR*WTCTSSPTSNPHAPTGATSSSLNTLLGGKKTTCPTK*SELWSHPTWA*T 508
T +P TT T T++PT+ PT T+ + T TT PT ++ + PT T
Sbjct: 221 TTTPTTTT----TTTTTPTTTTTTPTTTTTPATTT--SETTTTTPTTTTQTTTKPTTTTT 274
Query: 509 TNT 517
T T
Sbjct: 275 TPT 277
Score = 27.5 bits (58), Expect = 8.6
Identities = 20/64 (31%), Positives = 29/64 (45%), Gaps = 1/64 (1%)
Frame = +2
Query: 329 TASPL*TTKR*WTCTSSPTSNPHAPTGATSS-SLNTLLGGKKTTCPTK*SELWSHPTWA* 505
T +P TT T T++PT+ PT T++ + T TT PT + + T
Sbjct: 151 TTTPTTTTTTPTTTTTTPTTTTTTPTTTTTTPTTTTTTPTTTTTAPTTTTTTPTTTTTTP 210
Query: 506 TTNT 517
TT T
Sbjct: 211 TTTT 214
>U64848-9|AAB04887.1| 128|Caenorhabditis elegans Hypothetical
protein C50E3.3 protein.
Length = 128
Score = 28.7 bits (61), Expect = 3.7
Identities = 16/42 (38%), Positives = 19/42 (45%)
Frame = -2
Query: 403 WGVWV*GWRRGTRPSPLGRLQWGSCPQQNGSKFHAKTLCRSS 278
WGVW GTR + G + C G KF+ KTL S
Sbjct: 24 WGVWF----DGTRKTKCGPSELTQCNSLKGFKFNDKTLVSKS 61
>AF067613-14|ABA54416.1| 395|Caenorhabditis elegans Hypothetical
protein F56D6.15 protein.
Length = 395
Score = 28.7 bits (61), Expect = 3.7
Identities = 14/36 (38%), Positives = 22/36 (61%), Gaps = 2/36 (5%)
Frame = +2
Query: 353 KR*WTCTSSPTSNPHA--PTGATSSSLNTLLGGKKT 454
K + C+ PT P A PT T++++N LGG++T
Sbjct: 113 KNYFVCSYDPTVQPKATTPTTTTAANVNCPLGGQQT 148
>Z73976-8|CAI79223.1| 215|Caenorhabditis elegans Hypothetical
protein T07C12.14 protein.
Length = 215
Score = 28.3 bits (60), Expect = 4.9
Identities = 13/45 (28%), Positives = 23/45 (51%)
Frame = +1
Query: 118 KHLVEHEQEEKQWDLLDNYMVAEDPFLGPGKNQKLTLFKEIRSVK 252
+HL + E E K+ D+L ++AE ++ + F+E R K
Sbjct: 35 EHLTQEEYERKKTDILRRAVLAESQYIALRTQLRDNKFREAREYK 79
>U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical protein
K06A9.1b protein.
Length = 2232
Score = 27.9 bits (59), Expect = 6.5
Identities = 26/75 (34%), Positives = 36/75 (48%)
Frame = +2
Query: 272 SSTGAAKSFCVKLGPVLLRTASPL*TTKR*WTCTSSPTSNPHAPTGATSSSLNTLLGGKK 451
S++G S L + + T SP +T+ T TS P+S+P T + SSS T +
Sbjct: 1960 STSGTNPSSPRSLSQITI-TPSPSQSTES--TQTSLPSSSPSPSTHSVSSSEGTTMSSGA 2016
Query: 452 TTCPTK*SELWSHPT 496
TT K S L S T
Sbjct: 2017 TTSGDKMSFLSSTGT 2031
>AL031633-19|CAA21031.1| 710|Caenorhabditis elegans Hypothetical
protein Y39A1A.22 protein.
Length = 710
Score = 27.9 bits (59), Expect = 6.5
Identities = 23/106 (21%), Positives = 44/106 (41%)
Frame = +1
Query: 115 KKHLVEHEQEEKQWDLLDNYMVAEDPFLGPGKNQKLTLFKEIRSVKPDTMKLIVNWSGKE 294
+K E +QE + +L + +AE +L +FK++ + DT + + GK+
Sbjct: 52 EKFFNECDQELTKINLFFSQKIAEGQGKHHELQTELQVFKDVLGSRSDTTGIRRRFGGKD 111
Query: 295 FLRETWTRFVEDSFPIVNDQEVMDVYLVANLKPTRPNRCYKFLAQH 432
+ TR E + + + + LV N + K L +H
Sbjct: 112 KFHKETTR-NEQQLKLAFSEFYLSLVLVQNFQQLNATGFRKILKKH 156
>Z99710-9|CAN99658.1| 402|Caenorhabditis elegans Hypothetical
protein F08A8.5b protein.
Length = 402
Score = 27.5 bits (58), Expect = 8.6
Identities = 12/39 (30%), Positives = 21/39 (53%)
Frame = -3
Query: 408 PVGACGFEVGDEVHVHHLLVVYNGEAVLNKTGPSFTQKL 292
P G G ++ + + +H + +AV+N T PSF + L
Sbjct: 91 PSGGLGNKLFEIISLHGIATSLQRKAVINATNPSFIETL 129
>Z99710-8|CAB16868.1| 383|Caenorhabditis elegans Hypothetical
protein F08A8.5a protein.
Length = 383
Score = 27.5 bits (58), Expect = 8.6
Identities = 12/39 (30%), Positives = 21/39 (53%)
Frame = -3
Query: 408 PVGACGFEVGDEVHVHHLLVVYNGEAVLNKTGPSFTQKL 292
P G G ++ + + +H + +AV+N T PSF + L
Sbjct: 72 PSGGLGNKLFEIISLHGIATSLQRKAVINATNPSFIETL 110
>Z27078-8|CAH04706.2| 1446|Caenorhabditis elegans Hypothetical
protein K04H4.2c protein.
Length = 1446
Score = 27.5 bits (58), Expect = 8.6
Identities = 14/30 (46%), Positives = 15/30 (50%)
Frame = -2
Query: 163 EDPIASPLVHVRLGASCAWRF**DSPSFCN 74
E PI S V R G SC + SP FCN
Sbjct: 647 ECPIGSVEVDPRFGTSCRYSLQCPSPYFCN 676
>U88314-9|AAF99881.1| 408|Caenorhabditis elegans Hypothetical
protein C46H11.2 protein.
Length = 408
Score = 27.5 bits (58), Expect = 8.6
Identities = 30/103 (29%), Positives = 43/103 (41%), Gaps = 18/103 (17%)
Frame = +1
Query: 349 DQEVMDVYLVANLKPTRPNRCYK-------FLAQHALRWEEDYVPHEVIRI-VEPSYVGM 504
D+ D+ V N PN Y+ F+ H R +DY+ EVI I PS + +
Sbjct: 126 DEHFFDIVFVCNGHYFAPNNPYEESAFEGSFIHSHDYRHSKDYIDKEVIVIGAGPSGIDI 185
Query: 505 NNEY-----RISLAKKGGGCP-----IMNIPQRVHQLVRVVCE 603
+ + +I+L K P I I Q V Q+V CE
Sbjct: 186 SLQLSETAKKITLISKKATYPTLPDNITQISQHVKQVVPEGCE 228
>U40958-4|AAA81763.1| 119|Caenorhabditis elegans Hypothetical
protein F09F9.3 protein.
Length = 119
Score = 27.5 bits (58), Expect = 8.6
Identities = 14/55 (25%), Positives = 22/55 (40%)
Frame = +1
Query: 460 PHEVIRIVEPSYVGMNNEYRISLAKKGGGCPIMNIPQRVHQLVRVVCEPRSYGEN 624
PHE +V + R+ + K G CP ++ V+ P+ YG N
Sbjct: 32 PHETPHLVTEKISKSWTDERLCVLKMGSACPQGFTEDQLKLSVQTDVNPKDYGHN 86
>U39666-3|AAA80410.2| 178|Caenorhabditis elegans Hypothetical
protein K04E7.1 protein.
Length = 178
Score = 27.5 bits (58), Expect = 8.6
Identities = 16/49 (32%), Positives = 24/49 (48%)
Frame = -3
Query: 537 LFSQTNSVFVVHAHVGWLHNSDYFVGHVVFFPPKSVLSEELVAPVGACG 391
L++ + V+V ++ WLH S G+V FP + L LV CG
Sbjct: 45 LYAVSFVVYVTNSICSWLHISFVVKGYVTSFPLNTWLVVSLVV-TAVCG 92
>EF015633-1|ABK20307.1| 383|Caenorhabditis elegans alpha
1,2-fucosyltransferase protein.
Length = 383
Score = 27.5 bits (58), Expect = 8.6
Identities = 12/39 (30%), Positives = 21/39 (53%)
Frame = -3
Query: 408 PVGACGFEVGDEVHVHHLLVVYNGEAVLNKTGPSFTQKL 292
P G G ++ + + +H + +AV+N T PSF + L
Sbjct: 72 PSGGLGNKLFEIISLHGIATSLQRKAVINATNPSFIETL 110
>AL117207-6|CAB60396.2| 372|Caenorhabditis elegans Hypothetical
protein Y60A3A.8 protein.
Length = 372
Score = 27.5 bits (58), Expect = 8.6
Identities = 14/42 (33%), Positives = 24/42 (57%)
Frame = +1
Query: 7 PINMPNYSYTPTIGRTYVYDNKYYKNLGCLIKNAKRKKHLVE 132
PI+ P ++ P + ++ V + YKN CL K +K + LV+
Sbjct: 2 PISEPTWAELPFLFKSAVVELLPYKNRCCLRKCSKSDQFLVD 43
>AL110477-5|CAB54329.1| 314|Caenorhabditis elegans Hypothetical
protein Y113G7B.7 protein.
Length = 314
Score = 27.5 bits (58), Expect = 8.6
Identities = 9/21 (42%), Positives = 16/21 (76%)
Frame = +1
Query: 448 EDYVPHEVIRIVEPSYVGMNN 510
+D + EV+R+ +PSY+G +N
Sbjct: 268 DDEIEPEVVRLFDPSYIGNDN 288
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,455,775
Number of Sequences: 27780
Number of extensions: 368371
Number of successful extensions: 1104
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 1027
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1097
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1427403330
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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