Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1952
         (668 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L11451-1|AAA28918.1|  786|Drosophila melanogaster serine protein...    32   0.61 
AY119618-1|AAM50272.1|  683|Drosophila melanogaster LD44584p pro...    32   0.61 
AE014297-2154|AAF55277.1|  787|Drosophila melanogaster CG4316-PA...    32   0.61 
AE014134-808|AAF50957.4| 1286|Drosophila melanogaster CG3047-PA ...    29   4.3  
L27654-1|AAA69925.1|  192|Drosophila melanogaster phosphoglycero...    29   7.6  
AE014297-727|AAF54213.2| 1667|Drosophila melanogaster CG9626-PA ...    29   7.6  
AE014297-116|AAF52115.2|  559|Drosophila melanogaster CG12586-PA...    29   7.6  
AY113593-1|AAM29598.1|  154|Drosophila melanogaster RH42520p pro...    28   10.0 
AY071343-1|AAL48965.1|  154|Drosophila melanogaster RE37932p pro...    28   10.0 
AE014297-976|AAN13434.1|  154|Drosophila melanogaster CG9399-PB,...    28   10.0 
AE014297-975|AAF54407.1|  154|Drosophila melanogaster CG9399-PA,...    28   10.0 

>L11451-1|AAA28918.1|  786|Drosophila melanogaster serine proteinase
           protein.
          Length = 786

 Score = 32.3 bits (70), Expect = 0.61
 Identities = 23/66 (34%), Positives = 31/66 (46%)
 Frame = +3

Query: 270 P*S*SSTGAAKSFCVKLGPVLLRTASPL*TTKR*WTCTSSPTSNPHAPTGATSSSLNTLL 449
           P S +ST ++ +          RT +P  TT+R  T T+ PT     PT ATSSS  +  
Sbjct: 402 PSSTTSTTSSTTSTTTTTTTTRRTTTPTTTTRR--TTTNKPTRPYQRPTTATSSSSTSTT 459

Query: 450 GGKKTT 467
             K  T
Sbjct: 460 SSKTPT 465


>AY119618-1|AAM50272.1|  683|Drosophila melanogaster LD44584p
           protein.
          Length = 683

 Score = 32.3 bits (70), Expect = 0.61
 Identities = 23/66 (34%), Positives = 31/66 (46%)
 Frame = +3

Query: 270 P*S*SSTGAAKSFCVKLGPVLLRTASPL*TTKR*WTCTSSPTSNPHAPTGATSSSLNTLL 449
           P S +ST ++ +          RT +P  TT+R  T T+ PT     PT ATSSS  +  
Sbjct: 299 PSSTTSTTSSTTSTTTTTTTTRRTTTPTTTTRR--TTTNKPTRPYQRPTTATSSSSTSTT 356

Query: 450 GGKKTT 467
             K  T
Sbjct: 357 SSKTPT 362


>AE014297-2154|AAF55277.1|  787|Drosophila melanogaster CG4316-PA
           protein.
          Length = 787

 Score = 32.3 bits (70), Expect = 0.61
 Identities = 23/66 (34%), Positives = 31/66 (46%)
 Frame = +3

Query: 270 P*S*SSTGAAKSFCVKLGPVLLRTASPL*TTKR*WTCTSSPTSNPHAPTGATSSSLNTLL 449
           P S +ST ++ +          RT +P  TT+R  T T+ PT     PT ATSSS  +  
Sbjct: 403 PSSTTSTTSSTTSTTTTTTTTRRTTTPTTTTRR--TTTNKPTRPYQRPTTATSSSSTSTT 460

Query: 450 GGKKTT 467
             K  T
Sbjct: 461 SSKTPT 466


>AE014134-808|AAF50957.4| 1286|Drosophila melanogaster CG3047-PA
           protein.
          Length = 1286

 Score = 29.5 bits (63), Expect = 4.3
 Identities = 23/65 (35%), Positives = 29/65 (44%), Gaps = 2/65 (3%)
 Frame = +3

Query: 339 TASPL*TTKR*WT--CTSSPTSNPHAPTGATSSSLNTLLGGKKTTCPTK*SELWSHPTWA 512
           T+ P  TT R  T  CT SPT+     T  TS+S  T    + TT  T      + P   
Sbjct: 536 TSRPTTTTPRSTTTTCTCSPTTTTPRSTTTTSTSRPTTTTPRSTTTTTTSRPTTTTPRST 595

Query: 513 *TTNT 527
            TT+T
Sbjct: 596 TTTST 600



 Score = 29.1 bits (62), Expect = 5.7
 Identities = 22/63 (34%), Positives = 29/63 (46%), Gaps = 2/63 (3%)
 Frame = +3

Query: 339  TASPL*TTKR*WT--CTSSPTSNPHAPTGATSSSLNTLLGGKKTTCPTK*SELWSHPTWA 512
            T+ P  TT R  T  CTS PT+     T  T++S  T    + TT P   +   + PT  
Sbjct: 1112 TSRPTTTTPRSTTTPCTSRPTTTTPRSTTTTTTSRPTTTTPRSTTTPCPTTTPSASPTRT 1171

Query: 513  *TT 521
             TT
Sbjct: 1172 TTT 1174


>L27654-1|AAA69925.1|  192|Drosophila melanogaster
           phosphoglyceromutase protein.
          Length = 192

 Score = 28.7 bits (61), Expect = 7.6
 Identities = 20/67 (29%), Positives = 30/67 (44%), Gaps = 1/67 (1%)
 Frame = +1

Query: 424 QVPRSTRS*VGRRLRAPRSNQNCG-AILRGHEQRIQN*SG*KGRRLPNHEHPQRVHQLVR 600
           QV R   + +  +LR P +    G ++LR H Q      G + R +P    PQ  H+   
Sbjct: 96  QVRRGPGADLASQLRHPATTDGAGPSVLREHRQGSPLRRGSQARGVPPVRVPQADHRAHT 155

Query: 601 VVCEPRH 621
            + E RH
Sbjct: 156 ALLERRH 162


>AE014297-727|AAF54213.2| 1667|Drosophila melanogaster CG9626-PA
           protein.
          Length = 1667

 Score = 28.7 bits (61), Expect = 7.6
 Identities = 18/55 (32%), Positives = 28/55 (50%), Gaps = 5/55 (9%)
 Frame = +2

Query: 335 EDSFPIVNDQEVMDVYLVANLKP-TRPNRC----YKFLAQHALRWEEDYVPHEVI 484
           E    +V+D +V     VAN  P T+P R     ++F  +H+L W E  +  EV+
Sbjct: 140 EAELTVVDDDDVPSTSQVANQHPPTKPPRSNNTDHQFDLEHSLTWLESLMGTEVV 194


>AE014297-116|AAF52115.2|  559|Drosophila melanogaster CG12586-PA
           protein.
          Length = 559

 Score = 28.7 bits (61), Expect = 7.6
 Identities = 20/57 (35%), Positives = 27/57 (47%)
 Frame = +3

Query: 357 TTKR*WTCTSSPTSNPHAPTGATSSSLNTLLGGKKTTCPTK*SELWSHPTWA*TTNT 527
           TTK   T T++PTS    PT  T+++     G   TT PT  +   + PT    T T
Sbjct: 228 TTKTTTTPTTTPTS---TPTTTTTTTTTQTTGTSTTTTPTTTTPTTTTPTITTPTTT 281


>AY113593-1|AAM29598.1|  154|Drosophila melanogaster RH42520p
           protein.
          Length = 154

 Score = 28.3 bits (60), Expect = 10.0
 Identities = 13/38 (34%), Positives = 17/38 (44%)
 Frame = +3

Query: 390 PTSNPHAPTGATSSSLNTLLGGKKTTCPTK*SELWSHP 503
           P++ P A  G  S   N ++G      P K   LW HP
Sbjct: 17  PSAVPSAGKGIHSKLYNGMIGAADKFVPAKLRPLWMHP 54


>AY071343-1|AAL48965.1|  154|Drosophila melanogaster RE37932p
           protein.
          Length = 154

 Score = 28.3 bits (60), Expect = 10.0
 Identities = 13/38 (34%), Positives = 17/38 (44%)
 Frame = +3

Query: 390 PTSNPHAPTGATSSSLNTLLGGKKTTCPTK*SELWSHP 503
           P++ P A  G  S   N ++G      P K   LW HP
Sbjct: 17  PSAVPSAGKGIHSKLYNGMIGAADKFVPAKLRPLWMHP 54


>AE014297-976|AAN13434.1|  154|Drosophila melanogaster CG9399-PB,
           isoform B protein.
          Length = 154

 Score = 28.3 bits (60), Expect = 10.0
 Identities = 13/38 (34%), Positives = 17/38 (44%)
 Frame = +3

Query: 390 PTSNPHAPTGATSSSLNTLLGGKKTTCPTK*SELWSHP 503
           P++ P A  G  S   N ++G      P K   LW HP
Sbjct: 17  PSAVPSAGKGIHSKLYNGMIGAADKFVPAKLRPLWMHP 54


>AE014297-975|AAF54407.1|  154|Drosophila melanogaster CG9399-PA,
           isoform A protein.
          Length = 154

 Score = 28.3 bits (60), Expect = 10.0
 Identities = 13/38 (34%), Positives = 17/38 (44%)
 Frame = +3

Query: 390 PTSNPHAPTGATSSSLNTLLGGKKTTCPTK*SELWSHP 503
           P++ P A  G  S   N ++G      P K   LW HP
Sbjct: 17  PSAVPSAGKGIHSKLYNGMIGAADKFVPAKLRPLWMHP 54


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,211,218
Number of Sequences: 53049
Number of extensions: 742951
Number of successful extensions: 2127
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 2001
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2127
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2889369000
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)