Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1950
         (683 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A7QBJ2 Cluster: Chromosome chr13 scaffold_74, whole gen...    33   4.9  
UniRef50_Q4YXH4 Cluster: Putative uncharacterized protein; n=1; ...    33   6.5  
UniRef50_A4BB01 Cluster: Putative uncharacterized protein; n=1; ...    33   8.6  

>UniRef50_A7QBJ2 Cluster: Chromosome chr13 scaffold_74, whole genome
           shotgun sequence; n=4; Magnoliophyta|Rep: Chromosome
           chr13 scaffold_74, whole genome shotgun sequence - Vitis
           vinifera (Grape)
          Length = 926

 Score = 33.5 bits (73), Expect = 4.9
 Identities = 15/56 (26%), Positives = 32/56 (57%)
 Frame = +1

Query: 1   LKNNKLTFTELPNR*LLHTSAIQALHRQETHLETVIKKFVKSISRHLMPNEMTTVS 168
           L + ++ F ++P R ++  +AI + + Q  H E  +  F+  ++R + PN++T  S
Sbjct: 505 LDDARVVFEKMPKRDVVSWTAIISAYVQAGHGEVALDLFLDMLARGIKPNQLTVTS 560


>UniRef50_Q4YXH4 Cluster: Putative uncharacterized protein; n=1;
           Plasmodium berghei|Rep: Putative uncharacterized protein
           - Plasmodium berghei
          Length = 149

 Score = 33.1 bits (72), Expect = 6.5
 Identities = 26/77 (33%), Positives = 35/77 (45%), Gaps = 10/77 (12%)
 Frame = -3

Query: 285 RIVKFHSHKFFITRLKKYNFKNV*LSKIY--YIKTMFVSLSANGRHLVRH--------KM 136
           +I + +   FF+  LK  NFK+V    +Y  YI T FV  S N      H        K+
Sbjct: 41  QIFQLYHFNFFLAFLKVGNFKHVFSHLVYDTYIYTCFVQNSENANIGYEHAWIKLKDIKV 100

Query: 135 PRYAFNKLFYYRFQMRF 85
               F   FY+RF +RF
Sbjct: 101 SHIFFIFHFYFRFYLRF 117


>UniRef50_A4BB01 Cluster: Putative uncharacterized protein; n=1;
           Reinekea sp. MED297|Rep: Putative uncharacterized
           protein - Reinekea sp. MED297
          Length = 699

 Score = 32.7 bits (71), Expect = 8.6
 Identities = 13/26 (50%), Positives = 18/26 (69%)
 Frame = -2

Query: 502 LNQFEKKKRIKQHPQTRILDIPFLDI 425
           LN FE  K +KQHPQTR + + F+ +
Sbjct: 70  LNGFEVHKLLKQHPQTRTIPVIFITV 95


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 561,613,009
Number of Sequences: 1657284
Number of extensions: 9510441
Number of successful extensions: 21145
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 20647
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21123
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 53305790091
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)