Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1950
         (683 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    25   0.89 
S78459-1|AAB34403.1|   50|Apis mellifera mast cell-degranulating...    22   4.7  
AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    22   6.3  
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    22   6.3  
AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase prot...    21   8.3  

>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 24.6 bits (51), Expect = 0.89
 Identities = 15/56 (26%), Positives = 25/56 (44%)
 Frame = -1

Query: 170 PLTVVISLGIRCRDMLLTNFFITVSKCVSCLCSACIALVCNNYLFGSSVKVSLLFL 3
           PL +V+ + +    + +T     VS CV    +  +    N YLF  +V   LL +
Sbjct: 49  PLYIVLPITVIYAVIFVTGLVGNVSTCVVIARNKSMHTATNYYLFSLAVSDLLLLI 104


>S78459-1|AAB34403.1|   50|Apis mellifera mast cell-degranulating
           peptide protein.
          Length = 50

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 6/18 (33%), Positives = 13/18 (72%)
 Frame = -1

Query: 128 MLLTNFFITVSKCVSCLC 75
           +L+T++F+T +  + C C
Sbjct: 15  ILITSYFVTPTMSIKCNC 32


>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 21.8 bits (44), Expect = 6.3
 Identities = 10/36 (27%), Positives = 17/36 (47%)
 Frame = -3

Query: 330 FSGQLHSVNFVSRCARIVKFHSHKFFITRLKKYNFK 223
           +   L +V+F+      VKF  H   + R +  NF+
Sbjct: 371 YKNYLLNVSFIDAAGSEVKFDEHGDGLARYEILNFR 406


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 21.8 bits (44), Expect = 6.3
 Identities = 10/36 (27%), Positives = 17/36 (47%)
 Frame = -3

Query: 330 FSGQLHSVNFVSRCARIVKFHSHKFFITRLKKYNFK 223
           +   L +V+F+      VKF  H   + R +  NF+
Sbjct: 461 YKNYLLNVSFIDAAGSEVKFDEHGDGLARYEILNFR 496


>AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase
           protein.
          Length = 693

 Score = 21.4 bits (43), Expect = 8.3
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = -1

Query: 155 ISLGIRCRDMLLTNFFI 105
           +S+ + CRD L  N FI
Sbjct: 110 LSVAVYCRDRLNPNLFI 126


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 166,561
Number of Sequences: 438
Number of extensions: 2946
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20830365
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)