Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1948
         (620 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI0001509DCA Cluster: hypothetical protein TTHERM_0013...    34   3.1  
UniRef50_Q3YSR3 Cluster: Putative uncharacterized protein; n=5; ...    33   5.5  
UniRef50_Q22AI9 Cluster: Putative uncharacterized protein; n=1; ...    33   5.5  
UniRef50_Q7RTC3 Cluster: Putative uncharacterized protein PY0007...    33   7.3  
UniRef50_UPI0000DB7859 Cluster: PREDICTED: similar to eIF2B- CG1...    32   9.6  

>UniRef50_UPI0001509DCA Cluster: hypothetical protein
           TTHERM_00138470; n=1; Tetrahymena thermophila SB210|Rep:
           hypothetical protein TTHERM_00138470 - Tetrahymena
           thermophila SB210
          Length = 728

 Score = 33.9 bits (74), Expect = 3.1
 Identities = 18/66 (27%), Positives = 28/66 (42%)
 Frame = +3

Query: 144 LNCSHSNSINENNKCKDVLESIPKTVVVNIKYQNKYIHDLMIRRGSRVCQLSVQYKFVYP 323
           L   HS +   + K K  L+SI   +V  I      + D ++     +  + + YK  YP
Sbjct: 255 LKIKHSQNKGMDEKVKGFLQSIYSEMVQFIDNDTNILDDFILYNPDNLINMQLAYKLAYP 314

Query: 324 QFYSML 341
           Q   ML
Sbjct: 315 QLEMML 320


>UniRef50_Q3YSR3 Cluster: Putative uncharacterized protein; n=5;
           canis group|Rep: Putative uncharacterized protein -
           Ehrlichia canis (strain Jake)
          Length = 421

 Score = 33.1 bits (72), Expect = 5.5
 Identities = 17/55 (30%), Positives = 29/55 (52%)
 Frame = +3

Query: 177 NNKCKDVLESIPKTVVVNIKYQNKYIHDLMIRRGSRVCQLSVQYKFVYPQFYSML 341
           +N  KD    I K  V+ + Y    + D +  +GSR   LS ++K +YP  +S++
Sbjct: 121 HNNYKDFEGKIEKNKVLVVAYDGNRVVDPVQGKGSREVMLSAKHKNIYPFSFSIV 175


>UniRef50_Q22AI9 Cluster: Putative uncharacterized protein; n=1;
           Tetrahymena thermophila SB210|Rep: Putative
           uncharacterized protein - Tetrahymena thermophila SB210
          Length = 456

 Score = 33.1 bits (72), Expect = 5.5
 Identities = 25/62 (40%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
 Frame = +3

Query: 141 FLNCSHSNSINENNKCKDVLESIPKTV--VVNIKYQNKYIHDLMIRRGSRVCQLSVQYKF 314
           FLN +   S NEN K  D+ + I      + NIK + KYIH+L IR  S +CQ    Y  
Sbjct: 41  FLN-NFYESHNENQKSIDLQKKIRLAYDQLKNIKEKEKYIHELKIR--SYLCQHLEHYYM 97

Query: 315 VY 320
            Y
Sbjct: 98  QY 99


>UniRef50_Q7RTC3 Cluster: Putative uncharacterized protein PY00071;
            n=4; Plasmodium (Vinckeia)|Rep: Putative uncharacterized
            protein PY00071 - Plasmodium yoelii yoelii
          Length = 2736

 Score = 32.7 bits (71), Expect = 7.3
 Identities = 15/46 (32%), Positives = 29/46 (63%), Gaps = 2/46 (4%)
 Frame = +3

Query: 132  IDEFLNCSHSNSINENNKCKDVL--ESIPKTVVVNIKYQNKYIHDL 263
            + E+ N + S SIN NN  ++++  E    +++ N K+++KYI +L
Sbjct: 1681 VKEYNNLNASTSINPNNNIENLINKEENDNSILTNQKFEDKYIDNL 1726


>UniRef50_UPI0000DB7859 Cluster: PREDICTED: similar to eIF2B-
           CG10315-PA, isoform A; n=1; Apis mellifera|Rep:
           PREDICTED: similar to eIF2B- CG10315-PA, isoform A -
           Apis mellifera
          Length = 484

 Score = 32.3 bits (70), Expect = 9.6
 Identities = 15/41 (36%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
 Frame = +3

Query: 165 SINENNKCKDVL-ESIPKTVVVNIKYQNKYIHDLMIRRGSR 284
           S  +NN  K V+ E++ K  +VN+ + N  IH  +IR G++
Sbjct: 131 SKEQNNNDKSVITETVKKIAIVNVPFVNSNIHPAIIRLGTQ 171


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 614,085,020
Number of Sequences: 1657284
Number of extensions: 11672363
Number of successful extensions: 27835
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 26672
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27821
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 45221970467
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)