Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1948
         (620 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY061018-1|AAL28566.1|  383|Drosophila melanogaster HL03862p pro...    29   5.1  
AE014296-822|AAN11597.1|  383|Drosophila melanogaster CG1318-PC,...    29   5.1  
AE014296-821|AAN11596.1|  606|Drosophila melanogaster CG1318-PD,...    29   5.1  
AE014296-820|AAG22248.1|  622|Drosophila melanogaster CG1318-PB,...    29   5.1  
AE014296-819|AAF47881.1|  622|Drosophila melanogaster CG1318-PA,...    29   5.1  

>AY061018-1|AAL28566.1|  383|Drosophila melanogaster HL03862p
           protein.
          Length = 383

 Score = 29.1 bits (62), Expect = 5.1
 Identities = 10/26 (38%), Positives = 17/26 (65%)
 Frame = -1

Query: 596 WKNFCSDPPTQALNTSAHSLAD*LQD 519
           WK+FC +PP   L+ + + + D L+D
Sbjct: 88  WKSFCVEPPCGQLDPTVNEMYDVLED 113


>AE014296-822|AAN11597.1|  383|Drosophila melanogaster CG1318-PC,
           isoform C protein.
          Length = 383

 Score = 29.1 bits (62), Expect = 5.1
 Identities = 10/26 (38%), Positives = 17/26 (65%)
 Frame = -1

Query: 596 WKNFCSDPPTQALNTSAHSLAD*LQD 519
           WK+FC +PP   L+ + + + D L+D
Sbjct: 88  WKSFCVEPPCGQLDPTVNEMYDVLED 113


>AE014296-821|AAN11596.1|  606|Drosophila melanogaster CG1318-PD,
           isoform D protein.
          Length = 606

 Score = 29.1 bits (62), Expect = 5.1
 Identities = 10/26 (38%), Positives = 17/26 (65%)
 Frame = -1

Query: 596 WKNFCSDPPTQALNTSAHSLAD*LQD 519
           WK+FC +PP   L+ + + + D L+D
Sbjct: 327 WKSFCVEPPCGQLDPTVNEMYDVLED 352


>AE014296-820|AAG22248.1|  622|Drosophila melanogaster CG1318-PB,
           isoform B protein.
          Length = 622

 Score = 29.1 bits (62), Expect = 5.1
 Identities = 10/26 (38%), Positives = 17/26 (65%)
 Frame = -1

Query: 596 WKNFCSDPPTQALNTSAHSLAD*LQD 519
           WK+FC +PP   L+ + + + D L+D
Sbjct: 327 WKSFCVEPPCGQLDPTVNEMYDVLED 352


>AE014296-819|AAF47881.1|  622|Drosophila melanogaster CG1318-PA,
           isoform A protein.
          Length = 622

 Score = 29.1 bits (62), Expect = 5.1
 Identities = 10/26 (38%), Positives = 17/26 (65%)
 Frame = -1

Query: 596 WKNFCSDPPTQALNTSAHSLAD*LQD 519
           WK+FC +PP   L+ + + + D L+D
Sbjct: 327 WKSFCVEPPCGQLDPTVNEMYDVLED 352


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,665,400
Number of Sequences: 53049
Number of extensions: 538908
Number of successful extensions: 1157
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1133
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1157
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2559155400
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)