Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1944
         (616 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY071386-1|AAL49008.1|  148|Drosophila melanogaster RE42475p pro...   179   3e-45
AE014135-29|AAN06514.1|  148|Drosophila melanogaster CG31997-PA ...   179   3e-45
AE014298-1544|AAF47993.1|  160|Drosophila melanogaster CG2081-PB...    32   0.54 
AE014298-1565|AAF48006.1|  115|Drosophila melanogaster CG15202-P...    30   2.9  
AF000178-1|AAB58341.1|  598|Drosophila melanogaster M-spondin pr...    29   6.6  
BT011525-1|AAS15661.1|   88|Drosophila melanogaster RH08789p pro...    28   8.7  
AE014298-1563|AAN09286.1|   88|Drosophila melanogaster CG32667-P...    28   8.7  

>AY071386-1|AAL49008.1|  148|Drosophila melanogaster RE42475p
           protein.
          Length = 148

 Score =  179 bits (435), Expect = 3e-45
 Identities = 75/99 (75%), Positives = 85/99 (85%)
 Frame = +2

Query: 146 KTFRRLIPADVLRDFPGMCFASTRCITVEPGNTWELSPFCGRSTCVVSEDQPPRLLELVE 325
           + F+RLIPADVLRDFPGMCFASTRC TVEPG +W+L+PFCGRSTCV +E+   +L ELVE
Sbjct: 34  RIFKRLIPADVLRDFPGMCFASTRCATVEPGKSWDLTPFCGRSTCVQNEENDAKLFELVE 93

Query: 326 DCGPLPLTNPKCQLDTEKTNKTAPFPGCCPIFTCEEGAK 442
           DCGPLPL N KC+LDTEKTNKTA FP CCPIFTC+ G K
Sbjct: 94  DCGPLPLANDKCKLDTEKTNKTASFPYCCPIFTCDPGVK 132


>AE014135-29|AAN06514.1|  148|Drosophila melanogaster CG31997-PA
           protein.
          Length = 148

 Score =  179 bits (435), Expect = 3e-45
 Identities = 75/99 (75%), Positives = 85/99 (85%)
 Frame = +2

Query: 146 KTFRRLIPADVLRDFPGMCFASTRCITVEPGNTWELSPFCGRSTCVVSEDQPPRLLELVE 325
           + F+RLIPADVLRDFPGMCFASTRC TVEPG +W+L+PFCGRSTCV +E+   +L ELVE
Sbjct: 34  RIFKRLIPADVLRDFPGMCFASTRCATVEPGKSWDLTPFCGRSTCVQNEENDAKLFELVE 93

Query: 326 DCGPLPLTNPKCQLDTEKTNKTAPFPGCCPIFTCEEGAK 442
           DCGPLPL N KC+LDTEKTNKTA FP CCPIFTC+ G K
Sbjct: 94  DCGPLPLANDKCKLDTEKTNKTASFPYCCPIFTCDPGVK 132


>AE014298-1544|AAF47993.1|  160|Drosophila melanogaster CG2081-PB,
           isoform B protein.
          Length = 160

 Score = 32.3 bits (70), Expect = 0.54
 Identities = 16/41 (39%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
 Frame = +2

Query: 311 LELVEDCGPLP-LTNPKCQLDTEKTNKTAPFPGCCPIFTCE 430
           L+L ED   +P LT   C      TN  A +P CCP++ C+
Sbjct: 68  LQLWEDSCQVPKLTQGNCT-PVPSTNPHAEYPRCCPLYECK 107


>AE014298-1565|AAF48006.1|  115|Drosophila melanogaster CG15202-PA
           protein.
          Length = 115

 Score = 29.9 bits (64), Expect = 2.9
 Identities = 21/84 (25%), Positives = 35/84 (41%), Gaps = 1/84 (1%)
 Frame = +2

Query: 185 DFPGMCFASTRCITVEPGNTWELSPFCGRSTCVVSEDQPPRLLELVEDCGPLPLT-NPKC 361
           D+PG C+       +    +++  P      C     +P  +LE +  CG   L    KC
Sbjct: 32  DYPGQCYYEELNQAIPKKQSYK--PINREGYCQSIYCRPDYVLE-ISYCGRHNLVPTEKC 88

Query: 362 QLDTEKTNKTAPFPGCCPIFTCEE 433
           ++ ++       FP CCP   C+E
Sbjct: 89  RIASDMRRT---FPECCPKLVCQE 109


>AF000178-1|AAB58341.1|  598|Drosophila melanogaster M-spondin
           protein.
          Length = 598

 Score = 28.7 bits (61), Expect = 6.6
 Identities = 12/29 (41%), Positives = 15/29 (51%)
 Frame = +2

Query: 323 EDCGPLPLTNPKCQLDTEKTNKTAPFPGC 409
           +D  P+P  NP   L T    +TAP  GC
Sbjct: 86  DDPSPVPNMNPTASLATPPATQTAPQTGC 114


>BT011525-1|AAS15661.1|   88|Drosophila melanogaster RH08789p
           protein.
          Length = 88

 Score = 28.3 bits (60), Expect = 8.7
 Identities = 8/11 (72%), Positives = 9/11 (81%)
 Frame = +2

Query: 395 PFPGCCPIFTC 427
           P+PGCCP F C
Sbjct: 78  PYPGCCPKFNC 88


>AE014298-1563|AAN09286.1|   88|Drosophila melanogaster CG32667-PA
           protein.
          Length = 88

 Score = 28.3 bits (60), Expect = 8.7
 Identities = 8/11 (72%), Positives = 9/11 (81%)
 Frame = +2

Query: 395 PFPGCCPIFTC 427
           P+PGCCP F C
Sbjct: 78  PYPGCCPKFNC 88


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,778,734
Number of Sequences: 53049
Number of extensions: 391572
Number of successful extensions: 1067
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1030
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1066
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2517878700
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)