Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1943
         (609 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain tran...    23   2.7  
AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia or...    23   2.7  
AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory recept...    22   4.6  
AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory recept...    21   8.1  
AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory recept...    21   8.1  

>AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain
           transcription factor Maxillopediaprotein.
          Length = 523

 Score = 22.6 bits (46), Expect = 2.7
 Identities = 7/15 (46%), Positives = 12/15 (80%)
 Frame = -3

Query: 316 FYHNKNPPAAKRHIN 272
           +Y+NKN P ++ +IN
Sbjct: 359 YYYNKNHPNSENYIN 373


>AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 471

 Score = 22.6 bits (46), Expect = 2.7
 Identities = 7/15 (46%), Positives = 12/15 (80%)
 Frame = -3

Query: 316 FYHNKNPPAAKRHIN 272
           +Y+NKN P ++ +IN
Sbjct: 307 YYYNKNHPNSENYIN 321


>AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory receptor
           candidate 34 protein.
          Length = 324

 Score = 21.8 bits (44), Expect = 4.6
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = +3

Query: 96  SFHFLSHIFSTFLFRFFSGK 155
           + HF+++I   F FRF   K
Sbjct: 212 TLHFVNYIDDLFFFRFEKSK 231


>AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory receptor
           candidate 39 protein.
          Length = 427

 Score = 21.0 bits (42), Expect = 8.1
 Identities = 10/16 (62%), Positives = 10/16 (62%)
 Frame = +1

Query: 316 NLKLIN*ELTVISWLV 363
           NL LI   L VISW V
Sbjct: 173 NLTLITYSLCVISWAV 188


>AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory receptor
           candidate 10 protein.
          Length = 437

 Score = 21.0 bits (42), Expect = 8.1
 Identities = 10/16 (62%), Positives = 10/16 (62%)
 Frame = +1

Query: 316 NLKLIN*ELTVISWLV 363
           NL LI   L VISW V
Sbjct: 173 NLTLITYSLCVISWAV 188


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 133,169
Number of Sequences: 336
Number of extensions: 2781
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15457268
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)