Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1943
         (609 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY989815-1|AAX86010.1|  459|Homo sapiens XTES protein.                 32   1.8  
AY534240-1|AAT07089.1|  459|Homo sapiens XK-related protein 3 pr...    32   1.8  
AK098608-1|BAC05352.1|  459|Homo sapiens protein ( Homo sapiens ...    32   1.8  

>AY989815-1|AAX86010.1|  459|Homo sapiens XTES protein.
          Length = 459

 Score = 31.9 bits (69), Expect = 1.8
 Identities = 12/33 (36%), Positives = 18/33 (54%)
 Frame = +3

Query: 93  FSFHFLSHIFSTFLFRFFSGKRISTCLAVCVGV 191
           +SF FL ++    +FRFF GK +  C    + V
Sbjct: 348 YSFQFLENVIMILVFRFFGGKTLLNCCDSLIAV 380


>AY534240-1|AAT07089.1|  459|Homo sapiens XK-related protein 3
           protein.
          Length = 459

 Score = 31.9 bits (69), Expect = 1.8
 Identities = 12/33 (36%), Positives = 18/33 (54%)
 Frame = +3

Query: 93  FSFHFLSHIFSTFLFRFFSGKRISTCLAVCVGV 191
           +SF FL ++    +FRFF GK +  C    + V
Sbjct: 348 YSFQFLENVIMILVFRFFGGKTLLNCCDSLIAV 380


>AK098608-1|BAC05352.1|  459|Homo sapiens protein ( Homo sapiens
           cDNA FLJ25742 fis, clone TST05965. ).
          Length = 459

 Score = 31.9 bits (69), Expect = 1.8
 Identities = 12/33 (36%), Positives = 18/33 (54%)
 Frame = +3

Query: 93  FSFHFLSHIFSTFLFRFFSGKRISTCLAVCVGV 191
           +SF FL ++    +FRFF GK +  C    + V
Sbjct: 348 YSFQFLENVIMILVFRFFGGKTLLNCCDSLIAV 380


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 77,628,222
Number of Sequences: 237096
Number of extensions: 1412420
Number of successful extensions: 2381
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 2325
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2381
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6466646650
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)