Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1941
         (660 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ325121-1|ABD14135.1|  181|Apis mellifera complementary sex det...    23   2.6  
DQ325120-1|ABD14134.1|  181|Apis mellifera complementary sex det...    23   2.6  
DQ325119-1|ABD14133.1|  181|Apis mellifera complementary sex det...    23   2.6  
DQ325118-1|ABD14132.1|  181|Apis mellifera complementary sex det...    23   2.6  
DQ325117-1|ABD14131.1|  181|Apis mellifera complementary sex det...    23   2.6  
DQ325116-1|ABD14130.1|  181|Apis mellifera complementary sex det...    23   2.6  
DQ325115-1|ABD14129.1|  185|Apis mellifera complementary sex det...    23   2.6  
DQ325114-1|ABD14128.1|  181|Apis mellifera complementary sex det...    23   2.6  
AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.    22   6.0  
AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    21   7.9  

>DQ325121-1|ABD14135.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = +2

Query: 215 NMFENNYETEFKGMLYF 265
           N + NNY T +K + Y+
Sbjct: 95  NNYNNNYNTNYKKLQYY 111


>DQ325120-1|ABD14134.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = +2

Query: 215 NMFENNYETEFKGMLYF 265
           N + NNY T +K + Y+
Sbjct: 95  NNYNNNYNTNYKKLQYY 111


>DQ325119-1|ABD14133.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = +2

Query: 215 NMFENNYETEFKGMLYF 265
           N + NNY T +K + Y+
Sbjct: 95  NNYNNNYNTNYKKLQYY 111


>DQ325118-1|ABD14132.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = +2

Query: 215 NMFENNYETEFKGMLYF 265
           N + NNY T +K + Y+
Sbjct: 95  NNYNNNYNTNYKKLQYY 111


>DQ325117-1|ABD14131.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = +2

Query: 215 NMFENNYETEFKGMLYF 265
           N + NNY T +K + Y+
Sbjct: 95  NNYNNNYNTNYKKLQYY 111


>DQ325116-1|ABD14130.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = +2

Query: 215 NMFENNYETEFKGMLYF 265
           N + NNY T +K + Y+
Sbjct: 95  NNYNNNYNTNYKKLQYY 111


>DQ325115-1|ABD14129.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = +2

Query: 215 NMFENNYETEFKGMLYF 265
           N + NNY T +K + Y+
Sbjct: 99  NNYNNNYNTNYKKLQYY 115


>DQ325114-1|ABD14128.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = +2

Query: 215 NMFENNYETEFKGMLYF 265
           N + NNY T +K + Y+
Sbjct: 95  NNYNNNYNTNYKKLQYY 111


>AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.
          Length = 615

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 7/19 (36%), Positives = 12/19 (63%)
 Frame = +1

Query: 505 FPAFNNTNLKLYYHHLSTP 561
           +P FN TN+  Y ++ + P
Sbjct: 376 YPTFNQTNVDQYLYNQTGP 394


>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = +3

Query: 312 TITGCFVLHNYMFINLITF 368
           T+T   V  N MFIN++ F
Sbjct: 328 TLTSISVESNTMFINILKF 346


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 178,220
Number of Sequences: 438
Number of extensions: 3923
Number of successful extensions: 11
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 19855845
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)