Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1939
         (583 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI000155C031 Cluster: PREDICTED: hypothetical protein,...    71   2e-11
UniRef50_Q4RZG4 Cluster: Chromosome undetermined SCAF14930, whol...    71   2e-11
UniRef50_Q9ESC7 Cluster: Protein yippee-like 1; n=10; Euteleosto...    71   3e-11
UniRef50_Q96NS1 Cluster: Protein yippee-like 4; n=66; Eukaryota|...    69   8e-11
UniRef50_P61236 Cluster: Protein yippee-like 3; n=11; Theria|Rep...    61   2e-08
UniRef50_Q3KZ81 Cluster: SJCHGC03882 protein; n=1; Schistosoma j...    48   2e-04
UniRef50_Q2R2Q4 Cluster: Yippee-like protein At4g27740, putative...    38   0.13 
UniRef50_Q2RZ74 Cluster: N-acetylmuramoyl-L-alanine amidase; n=1...    32   8.6  
UniRef50_Q7RY81 Cluster: Putative uncharacterized protein NCU000...    32   8.6  
UniRef50_P38191 Cluster: Protein yippee-like MOH1; n=4; Saccharo...    32   8.6  

>UniRef50_UPI000155C031 Cluster: PREDICTED: hypothetical protein,
           partial; n=1; Ornithorhynchus anatinus|Rep: PREDICTED:
           hypothetical protein, partial - Ornithorhynchus anatinus
          Length = 247

 Score = 71.3 bits (167), Expect = 2e-11
 Identities = 35/53 (66%), Positives = 38/53 (71%), Gaps = 4/53 (7%)
 Frame = +2

Query: 368 GVAGESGGGTPA---VK-TPVKTFQAYLPPAHRTYSCIHCRAHLASHDELISK 514
           G+ G   G  P    VK T  KTFQAYLP  HRTYSC+HCRAHLA+HDELISK
Sbjct: 151 GLPGPGPGAPPPAAMVKMTKSKTFQAYLPACHRTYSCVHCRAHLANHDELISK 203


>UniRef50_Q4RZG4 Cluster: Chromosome undetermined SCAF14930, whole
           genome shotgun sequence; n=2; Tetraodontidae|Rep:
           Chromosome undetermined SCAF14930, whole genome shotgun
           sequence - Tetraodon nigroviridis (Green puffer)
          Length = 249

 Score = 71.3 bits (167), Expect = 2e-11
 Identities = 33/47 (70%), Positives = 37/47 (78%), Gaps = 1/47 (2%)
 Frame = +2

Query: 398 PAVK-TPVKTFQAYLPPAHRTYSCIHCRAHLASHDELISKVVSRQVG 535
           P V+ T  KTFQAYLP  HRTYSCIHCRAHLA+HDELISK   ++ G
Sbjct: 38  PMVRMTRSKTFQAYLPSCHRTYSCIHCRAHLANHDELISKCQWQKAG 84


>UniRef50_Q9ESC7 Cluster: Protein yippee-like 1; n=10;
           Euteleostomi|Rep: Protein yippee-like 1 - Mus musculus
           (Mouse)
          Length = 118

 Score = 70.5 bits (165), Expect = 3e-11
 Identities = 32/44 (72%), Positives = 33/44 (75%)
 Frame = +2

Query: 410 TPVKTFQAYLPPAHRTYSCIHCRAHLASHDELISKVVSRQVGGA 541
           T  KTFQAYLP  HRTYSCIHCRAHLA+HDELISK      G A
Sbjct: 5   TKSKTFQAYLPHCHRTYSCIHCRAHLANHDELISKSFQGSQGRA 48


>UniRef50_Q96NS1 Cluster: Protein yippee-like 4; n=66;
           Eukaryota|Rep: Protein yippee-like 4 - Homo sapiens
           (Human)
          Length = 127

 Score = 68.9 bits (161), Expect = 8e-11
 Identities = 34/54 (62%), Positives = 37/54 (68%)
 Frame = +2

Query: 413 PVKTFQAYLPPAHRTYSCIHCRAHLASHDELISKVVSRQVGGARICLNFKFVNV 574
           P KTF++YLP  HRTYSC+HCRAHLA HDELISK  S Q    R  L    VNV
Sbjct: 14  PTKTFRSYLPRCHRTYSCVHCRAHLAKHDELISK--SFQGSHGRAYLFNSVVNV 65


>UniRef50_P61236 Cluster: Protein yippee-like 3; n=11; Theria|Rep:
           Protein yippee-like 3 - Homo sapiens (Human)
          Length = 119

 Score = 61.3 bits (142), Expect = 2e-08
 Identities = 27/41 (65%), Positives = 29/41 (70%)
 Frame = +2

Query: 419 KTFQAYLPPAHRTYSCIHCRAHLASHDELISKVVSRQVGGA 541
           KTFQAYL   HR YSC HCRAHLA+HD+LISK      G A
Sbjct: 8   KTFQAYLDDCHRRYSCAHCRAHLANHDDLISKSFQGSQGRA 48


>UniRef50_Q3KZ81 Cluster: SJCHGC03882 protein; n=1; Schistosoma
           japonicum|Rep: SJCHGC03882 protein - Schistosoma
           japonicum (Blood fluke)
          Length = 103

 Score = 47.6 bits (108), Expect = 2e-04
 Identities = 23/41 (56%), Positives = 25/41 (60%), Gaps = 2/41 (4%)
 Frame = +2

Query: 425 FQAYLPPAHR--TYSCIHCRAHLASHDELISKVVSRQVGGA 541
           FQ Y P      TYSC+HCRAHLA HD+LISK      G A
Sbjct: 6   FQTYFPFEKNCLTYSCLHCRAHLARHDDLISKSFQGSQGRA 46


>UniRef50_Q2R2Q4 Cluster: Yippee-like protein At4g27740, putative,
           expressed; n=3; Magnoliophyta|Rep: Yippee-like protein
           At4g27740, putative, expressed - Oryza sativa subsp.
           japonica (Rice)
          Length = 106

 Score = 38.3 bits (85), Expect = 0.13
 Identities = 15/30 (50%), Positives = 19/30 (63%)
 Frame = +2

Query: 452 RTYSCIHCRAHLASHDELISKVVSRQVGGA 541
           R YSC HCR H+  HD++ISK    + G A
Sbjct: 8   RVYSCCHCRNHVCLHDDIISKAFQGRNGRA 37


>UniRef50_Q2RZ74 Cluster: N-acetylmuramoyl-L-alanine amidase; n=1;
           Salinibacter ruber DSM 13855|Rep:
           N-acetylmuramoyl-L-alanine amidase - Salinibacter ruber
           (strain DSM 13855)
          Length = 198

 Score = 32.3 bits (70), Expect = 8.6
 Identities = 24/77 (31%), Positives = 37/77 (48%)
 Frame = -2

Query: 348 SRMSAC*LPGASSIHPPPT*AASTVGHLPRALSPRPARFLLAPATLFWHSGERVILRRGN 169
           S  SAC  PG+S   PP T AA+T    P    P P R  +AP++    +   V  R  +
Sbjct: 18  SLASAC-TPGSSRSSPPDTTAAATAPEAPE--DPSPKRPSVAPSSPTDTASRSVSQRLAD 74

Query: 168 IYVETKSERGSQQNNTL 118
             V  ++++   ++ TL
Sbjct: 75  ASVAARAKQALARHRTL 91


>UniRef50_Q7RY81 Cluster: Putative uncharacterized protein
           NCU00024.1; n=3; Sordariomycetes|Rep: Putative
           uncharacterized protein NCU00024.1 - Neurospora crassa
          Length = 227

 Score = 32.3 bits (70), Expect = 8.6
 Identities = 12/30 (40%), Positives = 20/30 (66%)
 Frame = +2

Query: 452 RTYSCIHCRAHLASHDELISKVVSRQVGGA 541
           + Y C +C+ HLA+H+++IS+    Q G A
Sbjct: 130 KIYGCRNCKTHLANHEDIISRNFRGQHGKA 159


>UniRef50_P38191 Cluster: Protein yippee-like MOH1; n=4;
           Saccharomycetales|Rep: Protein yippee-like MOH1 -
           Saccharomyces cerevisiae (Baker's yeast)
          Length = 138

 Score = 32.3 bits (70), Expect = 8.6
 Identities = 17/40 (42%), Positives = 25/40 (62%)
 Frame = +2

Query: 455 TYSCIHCRAHLASHDELISKVVSRQVGGARICLNFKFVNV 574
           TY C HC+ HL+S  ++IS+    + G A + +N K VNV
Sbjct: 42  TYGCRHCKTHLSSSFQIISRDYRGRTGTAYL-MN-KVVNV 79


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 482,369,035
Number of Sequences: 1657284
Number of extensions: 8120971
Number of successful extensions: 25543
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 24550
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25519
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 40404161459
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)