Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1939
         (583 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY060270-1|AAL25309.1|  114|Drosophila melanogaster GH10478p pro...    70   3e-12
AE014298-1418|AAF46560.1|  114|Drosophila melanogaster CG15309-P...    70   3e-12
AY071225-1|AAL48847.1| 1203|Drosophila melanogaster RE26660p pro...    31   1.1  
AE014296-982|AAF50759.1| 1203|Drosophila melanogaster CG5249-PA ...    31   1.1  
BT014653-1|AAT27277.1|  247|Drosophila melanogaster RE02040p pro...    29   4.6  
AE014298-2470|AAN09420.1|  247|Drosophila melanogaster CG32570-P...    29   4.6  
AE014297-214|AAN13271.1| 1055|Drosophila melanogaster CG32464-PK...    29   6.1  

>AY060270-1|AAL25309.1|  114|Drosophila melanogaster GH10478p
           protein.
          Length = 114

 Score = 69.7 bits (163), Expect = 3e-12
 Identities = 31/42 (73%), Positives = 33/42 (78%)
 Frame = +2

Query: 416 VKTFQAYLPPAHRTYSCIHCRAHLASHDELISKVVSRQVGGA 541
           VKTFQAYLP  +RTYSC+HCRAHLASHDELISK      G A
Sbjct: 2   VKTFQAYLPSTNRTYSCVHCRAHLASHDELISKSFQGSQGPA 43


>AE014298-1418|AAF46560.1|  114|Drosophila melanogaster CG15309-PA
           protein.
          Length = 114

 Score = 69.7 bits (163), Expect = 3e-12
 Identities = 31/42 (73%), Positives = 33/42 (78%)
 Frame = +2

Query: 416 VKTFQAYLPPAHRTYSCIHCRAHLASHDELISKVVSRQVGGA 541
           VKTFQAYLP  +RTYSC+HCRAHLASHDELISK      G A
Sbjct: 2   VKTFQAYLPSTNRTYSCVHCRAHLASHDELISKSFQGSQGPA 43


>AY071225-1|AAL48847.1| 1203|Drosophila melanogaster RE26660p
           protein.
          Length = 1203

 Score = 31.1 bits (67), Expect = 1.1
 Identities = 15/40 (37%), Positives = 18/40 (45%)
 Frame = +2

Query: 365 GGVAGESGGGTPAVKTPVKTFQAYLPPAHRTYSCIHCRAH 484
           G VAG   G TP   T     +   PPAH + +   C AH
Sbjct: 324 GSVAGSVSGATPPPPTATPCCRRSSPPAHVSTTTSTCNAH 363


>AE014296-982|AAF50759.1| 1203|Drosophila melanogaster CG5249-PA
           protein.
          Length = 1203

 Score = 31.1 bits (67), Expect = 1.1
 Identities = 15/40 (37%), Positives = 18/40 (45%)
 Frame = +2

Query: 365 GGVAGESGGGTPAVKTPVKTFQAYLPPAHRTYSCIHCRAH 484
           G VAG   G TP   T     +   PPAH + +   C AH
Sbjct: 324 GSVAGSVSGATPPPPTATPCCRRSSPPAHVSTTTSTCNAH 363


>BT014653-1|AAT27277.1|  247|Drosophila melanogaster RE02040p
           protein.
          Length = 247

 Score = 29.1 bits (62), Expect = 4.6
 Identities = 17/46 (36%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
 Frame = +2

Query: 368 GVAGESGGGTPAVKTPVKTFQAYLPPAHRTYS-CIHCRAHLASHDE 502
           G+ G SGGG  +++ P +    YLPPA  T +  I+ + +L S  E
Sbjct: 45  GIGGSSGGGLVSIQ-PHRGGDKYLPPASTTLAPIINKKFYLVSAPE 89


>AE014298-2470|AAN09420.1|  247|Drosophila melanogaster CG32570-PA
           protein.
          Length = 247

 Score = 29.1 bits (62), Expect = 4.6
 Identities = 17/46 (36%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
 Frame = +2

Query: 368 GVAGESGGGTPAVKTPVKTFQAYLPPAHRTYS-CIHCRAHLASHDE 502
           G+ G SGGG  +++ P +    YLPPA  T +  I+ + +L S  E
Sbjct: 45  GIGGSSGGGLVSIQ-PHRGGDKYLPPASTTLAPIINKKFYLVSAPE 89


>AE014297-214|AAN13271.1| 1055|Drosophila melanogaster CG32464-PK,
           isoform K protein.
          Length = 1055

 Score = 28.7 bits (61), Expect = 6.1
 Identities = 14/48 (29%), Positives = 22/48 (45%)
 Frame = +2

Query: 356 TNRGGVAGESGGGTPAVKTPVKTFQAYLPPAHRTYSCIHCRAHLASHD 499
           T + G+ G S  G        ++++    P  +TY  I   +H ASHD
Sbjct: 806 TTKAGMGGGSQDGEEISDLTRESWELIKAPFAKTYKIIKTASHAASHD 853


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,238,237
Number of Sequences: 53049
Number of extensions: 407631
Number of successful extensions: 1492
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1404
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1492
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2317436688
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)